isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 63 |
| AciI | CCGC | 2 cut(s) | 107, 526 |
| AclI | AACGTT | 1 cut(s) | 133 |
| AfaI | GTAC | 1 cut(s) | 383 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 510 |
| AgsI | TTSAA | 5 cut(s) | 175, 219, 403, 532, 551 |
| AjnI | CCWGG | 2 cut(s) | 223, 505 |
| AluBI | AGCT | 4 cut(s) | 347, 411, 559, 609 |
| AluI | AGCT | 4 cut(s) | 347, 411, 559, 609 |
| AoxI | GGCC | 3 cut(s) | 328, 500, 512 |
| ApeKI | GCWGC | 3 cut(s) | 335, 347, 609 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 527 |
| AspA2I | CCTAGG | 1 cut(s) | 515 |
| AspS9I | GGNCC | 2 cut(s) | 138, 501 |
| AsuHPI | GGTGA | 1 cut(s) | 532 |
| AvaII | GGWCC | 1 cut(s) | 138 |
| AvrII | CCTAGG | 1 cut(s) | 515 |
| BaeGI | GKGCMC | 1 cut(s) | 593 |
| BbsI | GAAGAC | 1 cut(s) | 444 |
| BbvI | GCAGC | 3 cut(s) | 322, 334, 596 |
| BccI | CCATC | 3 cut(s) | 97, 178, 435 |
| BceAI | ACGGC | 1 cut(s) | 343 |
| BciT130I | CCWGG | 2 cut(s) | 225, 507 |
| BfaI | CTAG | 1 cut(s) | 516 |
| BfmI | CTRYAG | 1 cut(s) | 412 |
| BisI | GCNGC | 3 cut(s) | 336, 348, 610 |
| BlnI | CCTAGG | 1 cut(s) | 515 |
| BlsI | GCNGC | 3 cut(s) | 337, 349, 611 |
| BmcAI | AGTACT | 1 cut(s) | 383 |
| Bme1390I | CCNGG | 2 cut(s) | 225, 507 |
| Bme18I | GGWCC | 1 cut(s) | 138 |
| BmgT120I | GGNCC | 2 cut(s) | 138, 501 |
| BmiI | GGNNCC | 1 cut(s) | 503 |
| BmrFI | CCNGG | 2 cut(s) | 225, 507 |
| BmsI | GCATC | 1 cut(s) | 45 |
| BpiI | GAAGAC | 1 cut(s) | 444 |
| BpmI | CTGGAG | 2 cut(s) | 246, 561 |
| BsaJI | CCNNGG | 4 cut(s) | 456, 505, 506, 515 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 155, 185 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 510 |
| Bse1I | ACTGG | 1 cut(s) | 59 |
| BseBI | CCWGG | 2 cut(s) | 225, 507 |
| BseDI | CCNNGG | 4 cut(s) | 456, 505, 506, 515 |
| BseGI | GGATG | 1 cut(s) | 427 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 510 |
| BseNI | ACTGG | 1 cut(s) | 59 |
| BseSI | GKGCMC | 1 cut(s) | 593 |
| BseXI | GCAGC | 3 cut(s) | 322, 334, 596 |
| BsgI | GTGCAG | 2 cut(s) | 200, 595 |
| BshFI | GGCC | 3 cut(s) | 330, 502, 514 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 510 |
| BsnI | GGCC | 3 cut(s) | 330, 502, 514 |
| Bsp1286I | GDGCHC | 1 cut(s) | 593 |
| Bsp143I | GATC | 3 cut(s) | 242, 274, 303 |
| BspACI | CCGC | 2 cut(s) | 107, 526 |
| BspANI | GGCC | 3 cut(s) | 330, 502, 514 |
| BspLI | GGNNCC | 1 cut(s) | 503 |
| BspQI | GCTCTTC | 1 cut(s) | 401 |
| BsrI | ACTGG | 1 cut(s) | 59 |
| BssECI | CCNNGG | 4 cut(s) | 456, 505, 506, 515 |
| BssMI | GATC | 3 cut(s) | 242, 274, 303 |
| BssT1I | CCWWGG | 1 cut(s) | 515 |
| Bst2UI | CCWGG | 2 cut(s) | 225, 507 |
| Bst4CI | ACNGT | 2 cut(s) | 68, 416 |
| Bst6I | CTCTTC | 2 cut(s) | 401, 491 |
| BstF5I | GGATG | 1 cut(s) | 427 |
| BstKTI | GATC | 3 cut(s) | 245, 277, 306 |
| BstMBI | GATC | 3 cut(s) | 242, 274, 303 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 55, 344 |
| BstNI | CCWGG | 2 cut(s) | 225, 507 |
| BstNSI | RCATGY | 1 cut(s) | 285 |
| BstSCI | CCNGG | 2 cut(s) | 223, 505 |
| BstSFI | CTRYAG | 1 cut(s) | 412 |
| BstSLI | GKGCMC | 1 cut(s) | 593 |
| BstV1I | GCAGC | 3 cut(s) | 322, 334, 596 |
| BstV2I | GAAGAC | 1 cut(s) | 444 |
| BsuRI | GGCC | 3 cut(s) | 330, 502, 514 |
| BtsCI | GGATG | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 2 cut(s) | 211, 612 |
| Cfr13I | GGNCC | 2 cut(s) | 138, 501 |
| Csp6I | GTAC | 1 cut(s) | 382 |
| CviAII | CATG | 4 cut(s) | 278, 282, 288, 389 |
| CviJI | RGCY | 9 cut(s) | 5, 330, 347, 411, 502, 514, 539, 559, 609 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 330, 347, 411, 502, 514, 539, 559, 609 |
| CviQI | GTAC | 1 cut(s) | 382 |
| DpnI | GATC | 3 cut(s) | 244, 276, 305 |
| DpnII | GATC | 3 cut(s) | 242, 274, 303 |
| Eam1104I | CTCTTC | 2 cut(s) | 401, 491 |
| EarI | CTCTTC | 2 cut(s) | 401, 491 |
| Eco130I | CCWWGG | 1 cut(s) | 515 |
| Eco147I | AGGCCT | 1 cut(s) | 514 |
| Eco47I | GGWCC | 1 cut(s) | 138 |
| EcoO109I | RGGNCCY | 1 cut(s) | 501 |
| EcoRII | CCWGG | 2 cut(s) | 223, 505 |
| EcoT14I | CCWWGG | 1 cut(s) | 515 |
| EcoT22I | ATGCAT | 1 cut(s) | 283 |
| ErhI | CCWWGG | 1 cut(s) | 515 |
| FaeI | CATG | 4 cut(s) | 281, 285, 291, 392 |
| FatI | CATG | 4 cut(s) | 277, 281, 287, 388 |
| FauI | CCCGC | 1 cut(s) | 100 |
| FauNDI | CATATG | 1 cut(s) | 256 |
| FblI | GTMKAC | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 3 cut(s) | 336, 348, 610 |
| FokI | GGATG | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 3 cut(s) | 336, 348, 610 |
| FspBI | CTAG | 1 cut(s) | 516 |
| GluI | GCNGC | 3 cut(s) | 336, 348, 610 |
| GsuI | CTGGAG | 2 cut(s) | 246, 561 |
| HaeIII | GGCC | 3 cut(s) | 330, 502, 514 |
| Hin1II | CATG | 4 cut(s) | 281, 285, 291, 392 |
| HincII | GTYRAC | 1 cut(s) | 265 |
| HindII | GTYRAC | 1 cut(s) | 265 |
| HinfI | GANTC | 3 cut(s) | 20, 461, 562 |
| HphI | GGTGA | 1 cut(s) | 532 |
| Hpy166II | GTNNAC | 2 cut(s) | 64, 265 |
| Hpy188I | TCNGA | 6 cut(s) | 247, 274, 355, 432, 460, 472 |
| Hpy188III | TCNNGA | 1 cut(s) | 403 |
| Hpy8I | GTNNAC | 2 cut(s) | 64, 265 |
| Hpy99I | CGWCG | 1 cut(s) | 201 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4III | ACNGT | 2 cut(s) | 68, 416 |
| HpyCH4IV | ACGT | 1 cut(s) | 133 |
| HpyCH4V | TGCA | 5 cut(s) | 41, 181, 281, 338, 612 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 55, 344 |
| HpySE526I | ACGT | 1 cut(s) | 133 |
| Hsp92II | CATG | 4 cut(s) | 281, 285, 291, 392 |
| Kzo9I | GATC | 3 cut(s) | 242, 274, 303 |
| LguI | GCTCTTC | 1 cut(s) | 401 |
| LpnPI | CCDG | 7 cut(s) | 72, 92, 210, 237, 492, 519, 525 |
| Lsp1109I | GCAGC | 3 cut(s) | 322, 334, 596 |
| LweI | GCATC | 1 cut(s) | 45 |
| MaeI | CTAG | 1 cut(s) | 516 |
| MaeII | ACGT | 1 cut(s) | 133 |
| MalI | GATC | 3 cut(s) | 244, 276, 305 |
| MboI | GATC | 3 cut(s) | 242, 274, 303 |
| MboII | GAAGA | 4 cut(s) | 134, 418, 444, 508 |
| MfeI | CAATTG | 2 cut(s) | 42, 307 |
| MhlI | GDGCHC | 1 cut(s) | 593 |
| MluCI | AATT | 3 cut(s) | 42, 87, 307 |
| MmeI | TCCRAC | 1 cut(s) | 116 |
| Mph1103I | ATGCAT | 1 cut(s) | 283 |
| MroXI | GAANNNNTTC | 1 cut(s) | 527 |
| MseI | TTAA | 3 cut(s) | 27, 90, 294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 286 |
| MspR9I | CCNGG | 2 cut(s) | 225, 507 |
| MunI | CAATTG | 2 cut(s) | 42, 307 |
| MvaI | CCWGG | 2 cut(s) | 225, 507 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 55, 344 |
| NdeI | CATATG | 1 cut(s) | 256 |
| NdeII | GATC | 3 cut(s) | 242, 274, 303 |
| NlaIII | CATG | 4 cut(s) | 281, 285, 291, 392 |
| NlaIV | GGNNCC | 1 cut(s) | 503 |
| NsiI | ATGCAT | 1 cut(s) | 283 |
| NspI | RCATGY | 1 cut(s) | 285 |
| PasI | CCCWGGG | 1 cut(s) | 506 |
| PceI | AGGCCT | 1 cut(s) | 514 |
| PciSI | GCTCTTC | 1 cut(s) | 401 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 571 |
| PdmI | GAANNNNTTC | 1 cut(s) | 527 |
| PfeI | GAWTC | 3 cut(s) | 20, 461, 562 |
| PfoI | TCCNGGA | 1 cut(s) | 223 |
| PkrI | GCNGC | 3 cut(s) | 337, 349, 611 |
| Psp1406I | AACGTT | 1 cut(s) | 133 |
| Psp6I | CCWGG | 2 cut(s) | 223, 505 |
| PspGI | CCWGG | 2 cut(s) | 223, 505 |
| PspN4I | GGNNCC | 1 cut(s) | 503 |
| PspPI | GGNCC | 2 cut(s) | 138, 501 |
| RsaI | GTAC | 1 cut(s) | 383 |
| RsaNI | GTAC | 1 cut(s) | 382 |
| RseI | CAYNNNNRTG | 1 cut(s) | 286 |
| SapI | GCTCTTC | 1 cut(s) | 401 |
| SaqAI | TTAA | 3 cut(s) | 27, 90, 294 |
| SatI | GCNGC | 3 cut(s) | 336, 348, 610 |
| Sau3AI | GATC | 3 cut(s) | 242, 274, 303 |
| Sau96I | GGNCC | 2 cut(s) | 138, 501 |
| ScaI | AGTACT | 1 cut(s) | 383 |
| ScrFI | CCNGG | 2 cut(s) | 225, 507 |
| SduI | GDGCHC | 1 cut(s) | 593 |
| SfaNI | GCATC | 1 cut(s) | 45 |
| SfcI | CTRYAG | 1 cut(s) | 412 |
| SinI | GGWCC | 1 cut(s) | 138 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 286 |
| Sse9I | AATT | 3 cut(s) | 42, 87, 307 |
| SseBI | AGGCCT | 1 cut(s) | 514 |
| SsiI | CCGC | 2 cut(s) | 107, 526 |
| SspMI | CTAG | 1 cut(s) | 516 |
| StuI | AGGCCT | 1 cut(s) | 514 |
| StyD4I | CCNGG | 2 cut(s) | 223, 505 |
| StyI | CCWWGG | 1 cut(s) | 515 |
| TaaI | ACNGT | 2 cut(s) | 68, 416 |
| TaiI | ACGT | 1 cut(s) | 136 |
| TaqI | TCGA | 1 cut(s) | 241 |
| TasI | AATT | 3 cut(s) | 42, 87, 307 |
| TatI | WGTACW | 1 cut(s) | 381 |
| TfiI | GAWTC | 3 cut(s) | 20, 461, 562 |
| Tru1I | TTAA | 3 cut(s) | 27, 90, 294 |
| Tru9I | TTAA | 3 cut(s) | 27, 90, 294 |
| TscAI | CASTG | 2 cut(s) | 211, 619 |
| TseI | GCWGC | 3 cut(s) | 335, 347, 609 |
| TspDTI | ATGAA | 3 cut(s) | 243, 276, 377 |
| TspRI | CASTG | 2 cut(s) | 211, 619 |
| VpaK11BI | GGWCC | 1 cut(s) | 138 |
| XceI | RCATGY | 1 cut(s) | 285 |
| XmaJI | CCTAGG | 1 cut(s) | 515 |
| XmiI | GTMKAC | 1 cut(s) | 63 |
| XmnI | GAANNNNTTC | 1 cut(s) | 527 |
| XspI | CTAG | 1 cut(s) | 516 |
| ZrmI | AGTACT | 1 cut(s) | 383 |
| Zsp2I | ATGCAT | 1 cut(s) | 283 |