isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 324 |
| AciI | CCGC | 1 cut(s) | 253 |
| AclI | AACGTT | 1 cut(s) | 28 |
| AcoI | YGGCCR | 1 cut(s) | 298 |
| AgsI | TTSAA | 3 cut(s) | 70, 259, 278 |
| AluBI | AGCT | 3 cut(s) | 138, 286, 336 |
| AluI | AGCT | 3 cut(s) | 138, 286, 336 |
| Ama87I | CYCGRG | 1 cut(s) | 233 |
| AoxI | GGCC | 2 cut(s) | 155, 298 |
| ApeKI | GCWGC | 2 cut(s) | 336, 358 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 254 |
| AspS9I | GGNCC | 2 cut(s) | 33, 155 |
| AsuC2I | CCSGG | 2 cut(s) | 234, 235 |
| AsuHPI | GGTGA | 1 cut(s) | 259 |
| AvaI | CYCGRG | 1 cut(s) | 233 |
| AvaII | GGWCC | 1 cut(s) | 33 |
| BaeGI | GKGCMC | 1 cut(s) | 320 |
| BbsI | GAAGAC | 1 cut(s) | 171 |
| BbvI | GCAGC | 2 cut(s) | 323, 370 |
| BccI | CCATC | 1 cut(s) | 73 |
| BceAI | ACGGC | 1 cut(s) | 285 |
| BcnI | CCSGG | 2 cut(s) | 234, 235 |
| BfaI | CTAG | 2 cut(s) | 114, 120 |
| BfmI | CTRYAG | 1 cut(s) | 139 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 306 |
| BisI | GCNGC | 2 cut(s) | 337, 359 |
| BlsI | GCNGC | 2 cut(s) | 338, 360 |
| Bme1390I | CCNGG | 2 cut(s) | 234, 235 |
| Bme18I | GGWCC | 1 cut(s) | 33 |
| BmeT110I | CYCGRG | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 2 cut(s) | 33, 155 |
| BmrFI | CCNGG | 2 cut(s) | 234, 235 |
| BpiI | GAAGAC | 1 cut(s) | 171 |
| Bpu10I | CCTNAGC | 1 cut(s) | 242 |
| BpuMI | CCSGG | 2 cut(s) | 234, 235 |
| BsaJI | CCNNGG | 1 cut(s) | 233 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 50, 80 |
| BseDI | CCNNGG | 1 cut(s) | 233 |
| BseGI | GGATG | 1 cut(s) | 22 |
| BseRI | GAGGAG | 1 cut(s) | 25 |
| BseSI | GKGCMC | 1 cut(s) | 320 |
| BseXI | GCAGC | 2 cut(s) | 323, 370 |
| BsgI | GTGCAG | 2 cut(s) | 95, 322 |
| BshFI | GGCC | 2 cut(s) | 157, 300 |
| BsiHKCI | CYCGRG | 1 cut(s) | 233 |
| BsiSI | CCGG | 1 cut(s) | 234 |
| BsnI | GGCC | 2 cut(s) | 157, 300 |
| BsoBI | CYCGRG | 1 cut(s) | 233 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| BspACI | CCGC | 1 cut(s) | 253 |
| BspANI | GGCC | 2 cut(s) | 157, 300 |
| BspQI | GCTCTTC | 1 cut(s) | 128 |
| BssECI | CCNNGG | 1 cut(s) | 233 |
| Bst4CI | ACNGT | 1 cut(s) | 143 |
| Bst6I | CTCTTC | 1 cut(s) | 128 |
| BstDEI | CTNAG | 1 cut(s) | 242 |
| BstF5I | GGATG | 1 cut(s) | 22 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 306, 315 |
| BstSCI | CCNGG | 2 cut(s) | 232, 233 |
| BstSFI | CTRYAG | 1 cut(s) | 139 |
| BstSLI | GKGCMC | 1 cut(s) | 320 |
| BstV1I | GCAGC | 2 cut(s) | 323, 370 |
| BstV2I | GAAGAC | 1 cut(s) | 171 |
| BsuRI | GGCC | 2 cut(s) | 157, 300 |
| BtsCI | GGATG | 1 cut(s) | 22 |
| BtsIMutI | CAGTG | 2 cut(s) | 106, 339 |
| Cfr13I | GGNCC | 2 cut(s) | 33, 155 |
| Cfr9I | CCCGGG | 1 cut(s) | 233 |
| CviJI | RGCY | 8 cut(s) | 117, 138, 157, 229, 241, 286, 300, 336 |
| CviKI_1 | RGCY | 8 cut(s) | 117, 138, 157, 229, 241, 286, 300, 336 |
| DdeI | CTNAG | 1 cut(s) | 242 |
| EaeI | YGGCCR | 1 cut(s) | 298 |
| Eam1104I | CTCTTC | 1 cut(s) | 128 |
| EarI | CTCTTC | 1 cut(s) | 128 |
| Eco47I | GGWCC | 1 cut(s) | 33 |
| Eco88I | CYCGRG | 1 cut(s) | 233 |
| FaiI | YATR | 5 cut(s) | 176, 206, 324, 366, 368 |
| Fnu4HI | GCNGC | 2 cut(s) | 337, 359 |
| FokI | GGATG | 1 cut(s) | 29 |
| Fsp4HI | GCNGC | 2 cut(s) | 337, 359 |
| FspBI | CTAG | 2 cut(s) | 114, 120 |
| GluI | GCNGC | 2 cut(s) | 337, 359 |
| HaeIII | GGCC | 2 cut(s) | 157, 300 |
| HapII | CCGG | 1 cut(s) | 234 |
| HindIII | AAGCTT | 1 cut(s) | 284 |
| HinfI | GANTC | 1 cut(s) | 188 |
| HpaII | CCGG | 1 cut(s) | 234 |
| HphI | GGTGA | 1 cut(s) | 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 1 cut(s) | 187 |
| Hpy8I | GTNNAC | 1 cut(s) | 127 |
| Hpy99I | CGWCG | 1 cut(s) | 96 |
| HpyAV | CCTTC | 1 cut(s) | 64 |
| HpyCH4III | ACNGT | 1 cut(s) | 143 |
| HpyCH4IV | ACGT | 1 cut(s) | 28 |
| HpyCH4V | TGCA | 2 cut(s) | 76, 339 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 306, 315 |
| HpyF3I | CTNAG | 1 cut(s) | 242 |
| HpySE526I | ACGT | 1 cut(s) | 28 |
| LguI | GCTCTTC | 1 cut(s) | 128 |
| LpnPI | CCDG | 1 cut(s) | 247 |
| Lsp1109I | GCAGC | 2 cut(s) | 323, 370 |
| MaeI | CTAG | 2 cut(s) | 114, 120 |
| MaeII | ACGT | 1 cut(s) | 28 |
| MboII | GAAGA | 4 cut(s) | 145, 171, 174, 235 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MmeI | TCCRAC | 2 cut(s) | 11, 247 |
| MnlI | CCTC | 8 cut(s) | 3, 6, 13, 52, 222, 231, 265, 357 |
| MroXI | GAANNNNTTC | 1 cut(s) | 254 |
| MspI | CCGG | 1 cut(s) | 234 |
| MspR9I | CCNGG | 2 cut(s) | 234, 235 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 306, 315 |
| NciI | CCSGG | 2 cut(s) | 234, 235 |
| PciSI | GCTCTTC | 1 cut(s) | 128 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 298 |
| PdmI | GAANNNNTTC | 1 cut(s) | 254 |
| PfeI | GAWTC | 1 cut(s) | 188 |
| PkrI | GCNGC | 2 cut(s) | 338, 360 |
| PsiI | TTATAA | 1 cut(s) | 324 |
| Psp1406I | AACGTT | 1 cut(s) | 28 |
| PspPI | GGNCC | 2 cut(s) | 33, 155 |
| SapI | GCTCTTC | 1 cut(s) | 128 |
| SatI | GCNGC | 2 cut(s) | 337, 359 |
| Sau96I | GGNCC | 2 cut(s) | 33, 155 |
| ScrFI | CCNGG | 2 cut(s) | 234, 235 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SetI | ASST | 9 cut(s) | 31, 68, 75, 140, 214, 276, 288, 338, 349 |
| SfcI | CTRYAG | 1 cut(s) | 139 |
| SinI | GGWCC | 1 cut(s) | 33 |
| SmaI | CCCGGG | 1 cut(s) | 235 |
| SsiI | CCGC | 1 cut(s) | 253 |
| SspMI | CTAG | 2 cut(s) | 114, 120 |
| StyD4I | CCNGG | 2 cut(s) | 232, 233 |
| TaaI | ACNGT | 1 cut(s) | 143 |
| TaiI | ACGT | 1 cut(s) | 31 |
| TfiI | GAWTC | 1 cut(s) | 188 |
| TscAI | CASTG | 2 cut(s) | 106, 346 |
| TseI | GCWGC | 2 cut(s) | 336, 358 |
| TspMI | CCCGGG | 1 cut(s) | 233 |
| TspRI | CASTG | 2 cut(s) | 106, 346 |
| VpaK11BI | GGWCC | 1 cut(s) | 33 |
| XmaI | CCCGGG | 1 cut(s) | 233 |
| XmnI | GAANNNNTTC | 1 cut(s) | 254 |
| XspI | CTAG | 2 cut(s) | 114, 120 |