isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1035 |
| AccI | GTMKAC | 1 cut(s) | 325 |
| AclWI | GGATC | 4 cut(s) | 13, 666, 783, 1168 |
| AcsI | RAATTY | 3 cut(s) | 632, 1012, 1068 |
| AcuI | CTGAAG | 1 cut(s) | 510 |
| AfaI | GTAC | 5 cut(s) | 121, 136, 368, 806, 1085 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 234 |
| AflII | CTTAAG | 1 cut(s) | 653 |
| AgsI | TTSAA | 5 cut(s) | 721, 859, 880, 936, 995 |
| AluBI | AGCT | 5 cut(s) | 173, 641, 1003, 1138, 1216 |
| AluI | AGCT | 5 cut(s) | 173, 641, 1003, 1138, 1216 |
| AlwI | GGATC | 4 cut(s) | 13, 666, 783, 1168 |
| ApeKI | GCWGC | 2 cut(s) | 941, 1135 |
| ApoI | RAATTY | 3 cut(s) | 632, 1012, 1068 |
| AseI | ATTAAT | 1 cut(s) | 903 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 311 |
| AsuHPI | GGTGA | 3 cut(s) | 176, 532, 839 |
| BaeGI | GKGCMC | 1 cut(s) | 986 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1044, 1077 |
| BamHI | GGATCC | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 878 |
| BbvI | GCAGC | 2 cut(s) | 928, 1147 |
| BccI | CCATC | 2 cut(s) | 607, 902 |
| BceAI | ACGGC | 1 cut(s) | 829 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 740, 774 |
| BciVI | GTATCC | 1 cut(s) | 429 |
| BfaI | CTAG | 2 cut(s) | 234, 567 |
| BfrI | CTTAAG | 1 cut(s) | 653 |
| BfuAI | ACCTGC | 1 cut(s) | 1035 |
| BfuI | GTATCC | 1 cut(s) | 429 |
| BisI | GCNGC | 2 cut(s) | 942, 1136 |
| BlsI | GCNGC | 2 cut(s) | 943, 1137 |
| BmiI | GGNNCC | 1 cut(s) | 7 |
| BmsI | GCATC | 3 cut(s) | 334, 391, 946 |
| BpiI | GAAGAC | 1 cut(s) | 878 |
| BpmI | CTGGAG | 1 cut(s) | 791 |
| BpuEI | CTTGAG | 3 cut(s) | 497, 754, 945 |
| BsaBI | GATNNNNATC | 1 cut(s) | 405 |
| BsaJI | CCNNGG | 2 cut(s) | 9, 927 |
| BsaWI | WCCGGW | 1 cut(s) | 703 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 730, 760, 779, 809 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 234 |
| Bse1I | ACTGG | 2 cut(s) | 422, 797 |
| Bse8I | GATNNNNATC | 1 cut(s) | 405 |
| BseDI | CCNNGG | 2 cut(s) | 9, 927 |
| BseGI | GGATG | 4 cut(s) | 112, 309, 406, 961 |
| BseJI | GATNNNNATC | 1 cut(s) | 405 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 234 |
| BseMII | CTCAG | 3 cut(s) | 165, 840, 966 |
| BseNI | ACTGG | 2 cut(s) | 422, 797 |
| BseRI | GAGGAG | 2 cut(s) | 529, 751 |
| BseSI | GKGCMC | 1 cut(s) | 986 |
| BseXI | GCAGC | 2 cut(s) | 928, 1147 |
| BsiSI | CCGG | 1 cut(s) | 704 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 234 |
| Bsp1286I | GDGCHC | 1 cut(s) | 986 |
| Bsp1407I | TGTACA | 1 cut(s) | 119 |
| Bsp143I | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| Bsp19I | CCATGG | 1 cut(s) | 927 |
| BspCNI | CTCAG | 3 cut(s) | 166, 841, 967 |
| BspLI | GGNNCC | 1 cut(s) | 7 |
| BspMI | ACCTGC | 1 cut(s) | 1035 |
| BspPI | GGATC | 4 cut(s) | 13, 666, 783, 1168 |
| BspTI | CTTAAG | 1 cut(s) | 653 |
| BsrGI | TGTACA | 1 cut(s) | 119 |
| BsrI | ACTGG | 2 cut(s) | 422, 797 |
| BssECI | CCNNGG | 2 cut(s) | 9, 927 |
| BssMI | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| BssT1I | CCWWGG | 2 cut(s) | 9, 927 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| Bst6I | CTCTTC | 2 cut(s) | 486, 875 |
| BstAFI | CTTAAG | 1 cut(s) | 653 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 401 |
| BstAUI | TGTACA | 1 cut(s) | 119 |
| BstDEI | CTNAG | 3 cut(s) | 174, 849, 975 |
| BstDSI | CCRYGG | 1 cut(s) | 927 |
| BstF5I | GGATG | 4 cut(s) | 112, 309, 406, 961 |
| BstKTI | GATC | 6 cut(s) | 8, 87, 538, 661, 778, 1176 |
| BstMBI | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 152, 392, 401, 938 |
| BstSLI | GKGCMC | 1 cut(s) | 986 |
| BstV1I | GCAGC | 2 cut(s) | 928, 1147 |
| BstV2I | GAAGAC | 1 cut(s) | 878 |
| BstX2I | RGATCY | 2 cut(s) | 5, 775 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1184 |
| BstYI | RGATCY | 2 cut(s) | 5, 775 |
| BsuI | GTATCC | 1 cut(s) | 429 |
| BtgI | CCRYGG | 1 cut(s) | 927 |
| BtsCI | GGATG | 4 cut(s) | 112, 309, 406, 961 |
| BtsI | GCAGTG | 1 cut(s) | 1072 |
| BtsIMutI | CAGTG | 2 cut(s) | 208, 1072 |
| BveI | ACCTGC | 1 cut(s) | 1035 |
| Csp6I | GTAC | 5 cut(s) | 120, 135, 367, 805, 1084 |
| CviAII | CATG | 9 cut(s) | 161, 300, 542, 724, 928, 1093, 1152, 1160, 1184 |
| CviQI | GTAC | 5 cut(s) | 120, 135, 367, 805, 1084 |
| DdeI | CTNAG | 3 cut(s) | 174, 849, 975 |
| DpnI | GATC | 6 cut(s) | 7, 86, 537, 660, 777, 1175 |
| DpnII | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| Eam1104I | CTCTTC | 2 cut(s) | 486, 875 |
| EarI | CTCTTC | 2 cut(s) | 486, 875 |
| Eco130I | CCWWGG | 2 cut(s) | 9, 927 |
| Eco57I | CTGAAG | 1 cut(s) | 510 |
| EcoT14I | CCWWGG | 2 cut(s) | 9, 927 |
| ErhI | CCWWGG | 2 cut(s) | 9, 927 |
| FaeI | CATG | 9 cut(s) | 164, 303, 545, 727, 931, 1096, 1155, 1163, 1187 |
| FatI | CATG | 9 cut(s) | 160, 299, 541, 723, 927, 1092, 1151, 1159, 1183 |
| FauNDI | CATATG | 1 cut(s) | 589 |
| FblI | GTMKAC | 1 cut(s) | 325 |
| Fnu4HI | GCNGC | 2 cut(s) | 942, 1136 |
| FokI | GGATG | 4 cut(s) | 119, 316, 413, 968 |
| Fsp4HI | GCNGC | 2 cut(s) | 942, 1136 |
| FspBI | CTAG | 2 cut(s) | 234, 567 |
| GluI | GCNGC | 2 cut(s) | 942, 1136 |
| GsuI | CTGGAG | 1 cut(s) | 791 |
| HapII | CCGG | 1 cut(s) | 704 |
| Hin1II | CATG | 9 cut(s) | 164, 303, 545, 727, 931, 1096, 1155, 1163, 1187 |
| HinfI | GANTC | 8 cut(s) | 49, 176, 206, 230, 443, 664, 851, 883 |
| HpaII | CCGG | 1 cut(s) | 704 |
| HphI | GGTGA | 3 cut(s) | 176, 532, 839 |
| Hpy166II | GTNNAC | 1 cut(s) | 326 |
| Hpy188III | TCNNGA | 7 cut(s) | 88, 257, 476, 733, 770, 896, 962 |
| Hpy8I | GTNNAC | 1 cut(s) | 326 |
| HpyAV | CCTTC | 4 cut(s) | 301, 737, 778, 1020 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4IV | ACGT | 1 cut(s) | 524 |
| HpyCH4V | TGCA | 4 cut(s) | 160, 299, 500, 1163 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 152, 392, 401, 938 |
| HpyF3I | CTNAG | 3 cut(s) | 174, 849, 975 |
| HpySE526I | ACGT | 1 cut(s) | 524 |
| Hsp92II | CATG | 9 cut(s) | 164, 303, 545, 727, 931, 1096, 1155, 1163, 1187 |
| Kzo9I | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| Lsp1109I | GCAGC | 2 cut(s) | 928, 1147 |
| LweI | GCATC | 3 cut(s) | 334, 391, 946 |
| MaeI | CTAG | 2 cut(s) | 234, 567 |
| MaeII | ACGT | 1 cut(s) | 524 |
| MaeIII | GTNAC | 2 cut(s) | 286, 520 |
| MalI | GATC | 6 cut(s) | 7, 86, 537, 660, 777, 1175 |
| MboI | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| MboII | GAAGA | 5 cut(s) | 503, 770, 878, 892, 1182 |
| MfeI | CAATTG | 2 cut(s) | 66, 936 |
| MflI | RGATCY | 2 cut(s) | 5, 775 |
| MhlI | GDGCHC | 1 cut(s) | 986 |
| MlyI | GAGTC | 5 cut(s) | 185, 215, 224, 860, 892 |
| MmeI | TCCRAC | 2 cut(s) | 1003, 1201 |
| MnlI | CCTC | 4 cut(s) | 507, 510, 729, 766 |
| MroXI | GAANNNNTTC | 1 cut(s) | 311 |
| MseI | TTAA | 4 cut(s) | 654, 810, 903, 1098 |
| MslI | CAYNNNNRTG | 1 cut(s) | 165 |
| MspA1I | CMGCKG | 2 cut(s) | 641, 1138 |
| MspCI | CTTAAG | 1 cut(s) | 653 |
| MspI | CCGG | 1 cut(s) | 704 |
| MunI | CAATTG | 2 cut(s) | 66, 936 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 152, 392, 401, 938 |
| NcoI | CCATGG | 1 cut(s) | 927 |
| NdeI | CATATG | 1 cut(s) | 589 |
| NdeII | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| NlaIII | CATG | 9 cut(s) | 164, 303, 545, 727, 931, 1096, 1155, 1163, 1187 |
| NlaIV | GGNNCC | 1 cut(s) | 7 |
| NmuCI | GTSAC | 2 cut(s) | 286, 520 |
| PdmI | GAANNNNTTC | 1 cut(s) | 311 |
| PfeI | GAWTC | 3 cut(s) | 49, 443, 664 |
| PkrI | GCNGC | 2 cut(s) | 943, 1137 |
| PleI | GAGTC | 5 cut(s) | 184, 214, 224, 859, 891 |
| PpsI | GAGTC | 5 cut(s) | 184, 214, 224, 859, 891 |
| PshBI | ATTAAT | 1 cut(s) | 903 |
| PspN4I | GGNNCC | 1 cut(s) | 7 |
| PsuI | RGATCY | 2 cut(s) | 5, 775 |
| PvuII | CAGCTG | 2 cut(s) | 641, 1138 |
| RsaI | GTAC | 5 cut(s) | 121, 136, 368, 806, 1085 |
| RsaNI | GTAC | 5 cut(s) | 120, 135, 367, 805, 1084 |
| RseI | CAYNNNNRTG | 1 cut(s) | 165 |
| SaqAI | TTAA | 4 cut(s) | 654, 810, 903, 1098 |
| SatI | GCNGC | 2 cut(s) | 942, 1136 |
| Sau3AI | GATC | 6 cut(s) | 5, 84, 535, 658, 775, 1173 |
| SchI | GAGTC | 5 cut(s) | 185, 215, 224, 860, 892 |
| SduI | GDGCHC | 1 cut(s) | 986 |
| SfaNI | GCATC | 3 cut(s) | 334, 391, 946 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 165 |
| SmlI | CTYRAG | 4 cut(s) | 476, 653, 733, 960 |
| SmoI | CTYRAG | 4 cut(s) | 476, 653, 733, 960 |
| SspI | AATATT | 1 cut(s) | 1235 |
| SspMI | CTAG | 2 cut(s) | 234, 567 |
| StyI | CCWWGG | 2 cut(s) | 9, 927 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TaiI | ACGT | 1 cut(s) | 527 |
| TaqI | TCGA | 2 cut(s) | 256, 441 |
| TatI | WGTACW | 3 cut(s) | 119, 366, 1083 |
| TfiI | GAWTC | 3 cut(s) | 49, 443, 664 |
| Tru1I | TTAA | 4 cut(s) | 654, 810, 903, 1098 |
| Tru9I | TTAA | 4 cut(s) | 654, 810, 903, 1098 |
| TscAI | CASTG | 2 cut(s) | 208, 1079 |
| TseFI | GTSAC | 2 cut(s) | 286, 520 |
| TseI | GCWGC | 2 cut(s) | 941, 1135 |
| Tsp45I | GTSAC | 2 cut(s) | 286, 520 |
| TspDTI | ATGAA | 8 cut(s) | 183, 230, 242, 320, 328, 343, 517, 1080 |
| TspGWI | ACGGA | 1 cut(s) | 152 |
| TspRI | CASTG | 2 cut(s) | 208, 1079 |
| Vha464I | CTTAAG | 1 cut(s) | 653 |
| VspI | ATTAAT | 1 cut(s) | 903 |
| XapI | RAATTY | 3 cut(s) | 632, 1012, 1068 |
| XmiI | GTMKAC | 1 cut(s) | 325 |
| XmnI | GAANNNNTTC | 1 cut(s) | 311 |
| XspI | CTAG | 2 cut(s) | 234, 567 |