MuDR family transposase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 228 - 259 | 1e-05 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 341, 390 |
| AclI | AACGTT | 1 cut(s) | 7 |
| AcoI | YGGCCR | 2 cut(s) | 854, 993 |
| AfaI | GTAC | 2 cut(s) | 130, 809 |
| AgsI | TTSAA | 8 cut(s) | 76, 89, 313, 601, 782, 829, 958, 977 |
| AjnI | CCWGG | 1 cut(s) | 649 |
| AluBI | AGCT | 4 cut(s) | 411, 773, 837, 985 |
| AluI | AGCT | 4 cut(s) | 411, 773, 837, 985 |
| AoxI | GGCC | 5 cut(s) | 754, 854, 926, 938, 993 |
| ApeKI | GCWGC | 3 cut(s) | 411, 761, 773 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 953 |
| AspA2I | CCTAGG | 1 cut(s) | 941 |
| AspS9I | GGNCC | 2 cut(s) | 502, 564 |
| AsuHPI | GGTGA | 1 cut(s) | 958 |
| AvaII | GGWCC | 2 cut(s) | 502, 564 |
| AvrII | CCTAGG | 1 cut(s) | 941 |
| BaeGI | GKGCMC | 1 cut(s) | 1015 |
| BanI | GGYRCC | 2 cut(s) | 341, 390 |
| BbsI | GAAGAC | 1 cut(s) | 870 |
| BbvI | GCAGC | 3 cut(s) | 398, 748, 760 |
| BccI | CCATC | 2 cut(s) | 526, 604 |
| BceAI | ACGGC | 3 cut(s) | 378, 769, 980 |
| BciT130I | CCWGG | 1 cut(s) | 651 |
| BclI | TGATCA | 1 cut(s) | 700 |
| BfaI | CTAG | 4 cut(s) | 50, 408, 645, 942 |
| BfmI | CTRYAG | 1 cut(s) | 838 |
| BisI | GCNGC | 3 cut(s) | 412, 762, 774 |
| BlnI | CCTAGG | 1 cut(s) | 941 |
| BlsI | GCNGC | 3 cut(s) | 413, 763, 775 |
| BmcAI | AGTACT | 1 cut(s) | 809 |
| Bme1390I | CCNGG | 1 cut(s) | 651 |
| Bme18I | GGWCC | 2 cut(s) | 502, 564 |
| BmgT120I | GGNCC | 2 cut(s) | 502, 564 |
| BmiI | GGNNCC | 2 cut(s) | 343, 392 |
| BmrFI | CCNGG | 1 cut(s) | 651 |
| BmsI | GCATC | 1 cut(s) | 471 |
| BpiI | GAAGAC | 1 cut(s) | 870 |
| BpmI | CTGGAG | 1 cut(s) | 672 |
| BpuEI | CTTGAG | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 1 cut(s) | 941 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 581, 611 |
| Bse1I | ACTGG | 1 cut(s) | 136 |
| BseBI | CCWGG | 1 cut(s) | 651 |
| BseDI | CCNNGG | 1 cut(s) | 941 |
| BseGI | GGATG | 1 cut(s) | 553 |
| BseMII | CTCAG | 1 cut(s) | 285 |
| BseNI | ACTGG | 1 cut(s) | 136 |
| BseRI | GAGGAG | 1 cut(s) | 556 |
| BseSI | GKGCMC | 1 cut(s) | 1015 |
| BseX3I | CGGCCG | 1 cut(s) | 854 |
| BseXI | GCAGC | 3 cut(s) | 398, 748, 760 |
| BsgI | GTGCAG | 1 cut(s) | 626 |
| Bsh1285I | CGRYCG | 1 cut(s) | 857 |
| BshFI | GGCC | 5 cut(s) | 756, 856, 928, 940, 995 |
| BshNI | GGYRCC | 2 cut(s) | 341, 390 |
| BsiEI | CGRYCG | 1 cut(s) | 857 |
| BsnI | GGCC | 5 cut(s) | 756, 856, 928, 940, 995 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1015 |
| Bsp143I | GATC | 4 cut(s) | 121, 668, 700, 729 |
| BspANI | GGCC | 5 cut(s) | 756, 856, 928, 940, 995 |
| BspCNI | CTCAG | 1 cut(s) | 286 |
| BspLI | GGNNCC | 2 cut(s) | 343, 392 |
| BspQI | GCTCTTC | 1 cut(s) | 827 |
| BspT107I | GGYRCC | 2 cut(s) | 341, 390 |
| BsrI | ACTGG | 1 cut(s) | 136 |
| BssECI | CCNNGG | 1 cut(s) | 941 |
| BssMI | GATC | 4 cut(s) | 121, 668, 700, 729 |
| BssT1I | CCWWGG | 1 cut(s) | 941 |
| Bst2UI | CCWGG | 1 cut(s) | 651 |
| Bst4CI | ACNGT | 1 cut(s) | 842 |
| Bst6I | CTCTTC | 1 cut(s) | 827 |
| BstDEI | CTNAG | 2 cut(s) | 294, 326 |
| BstF5I | GGATG | 1 cut(s) | 553 |
| BstKTI | GATC | 4 cut(s) | 124, 671, 703, 732 |
| BstMBI | GATC | 4 cut(s) | 121, 668, 700, 729 |
| BstMCI | CGRYCG | 1 cut(s) | 857 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 209, 481, 770, 1001, 1010 |
| BstNI | CCWGG | 1 cut(s) | 651 |
| BstSCI | CCNGG | 1 cut(s) | 649 |
| BstSFI | CTRYAG | 1 cut(s) | 838 |
| BstSLI | GKGCMC | 1 cut(s) | 1015 |
| BstV1I | GCAGC | 3 cut(s) | 398, 748, 760 |
| BstV2I | GAAGAC | 1 cut(s) | 870 |
| BstZI | CGGCCG | 1 cut(s) | 854 |
| BsuRI | GGCC | 5 cut(s) | 756, 856, 928, 940, 995 |
| BtsCI | GGATG | 1 cut(s) | 553 |
| BtsIMutI | CAGTG | 2 cut(s) | 291, 637 |
| Cfr13I | GGNCC | 2 cut(s) | 502, 564 |
| Csp6I | GTAC | 2 cut(s) | 129, 808 |
| CviAII | CATG | 2 cut(s) | 708, 714 |
| CviJI | RGCY | 9 cut(s) | 411, 756, 773, 837, 856, 928, 940, 985, 995 |
| CviKI_1 | RGCY | 9 cut(s) | 411, 756, 773, 837, 856, 928, 940, 985, 995 |
| CviQI | GTAC | 2 cut(s) | 129, 808 |
| DdeI | CTNAG | 2 cut(s) | 294, 326 |
| DpnI | GATC | 4 cut(s) | 123, 670, 702, 731 |
| DpnII | GATC | 4 cut(s) | 121, 668, 700, 729 |
| EaeI | YGGCCR | 2 cut(s) | 854, 993 |
| EagI | CGGCCG | 1 cut(s) | 854 |
| Eam1104I | CTCTTC | 1 cut(s) | 827 |
| EarI | CTCTTC | 1 cut(s) | 827 |
| EclXI | CGGCCG | 1 cut(s) | 854 |
| Eco130I | CCWWGG | 1 cut(s) | 941 |
| Eco147I | AGGCCT | 1 cut(s) | 940 |
| Eco47I | GGWCC | 2 cut(s) | 502, 564 |
| Eco52I | CGGCCG | 1 cut(s) | 854 |
| EcoRII | CCWGG | 1 cut(s) | 649 |
| EcoT14I | CCWWGG | 1 cut(s) | 941 |
| ErhI | CCWWGG | 1 cut(s) | 941 |
| FaeI | CATG | 2 cut(s) | 711, 717 |
| FatI | CATG | 2 cut(s) | 707, 713 |
| FbaI | TGATCA | 1 cut(s) | 700 |
| Fnu4HI | GCNGC | 3 cut(s) | 412, 762, 774 |
| FokI | GGATG | 1 cut(s) | 560 |
| Fsp4HI | GCNGC | 3 cut(s) | 412, 762, 774 |
| FspBI | CTAG | 4 cut(s) | 50, 408, 645, 942 |
| GluI | GCNGC | 3 cut(s) | 412, 762, 774 |
| GsuI | CTGGAG | 1 cut(s) | 672 |
| HaeIII | GGCC | 5 cut(s) | 756, 856, 928, 940, 995 |
| Hin1II | CATG | 2 cut(s) | 711, 717 |
| HincII | GTYRAC | 1 cut(s) | 691 |
| HindII | GTYRAC | 1 cut(s) | 691 |
| HindIII | AAGCTT | 1 cut(s) | 983 |
| HinfI | GANTC | 5 cut(s) | 36, 102, 446, 887, 954 |
| HphI | GGTGA | 1 cut(s) | 958 |
| Hpy166II | GTNNAC | 2 cut(s) | 658, 691 |
| Hpy188I | TCNGA | 4 cut(s) | 35, 673, 700, 886 |
| Hpy188III | TCNNGA | 2 cut(s) | 244, 829 |
| Hpy8I | GTNNAC | 2 cut(s) | 658, 691 |
| Hpy99I | CGWCG | 1 cut(s) | 627 |
| HpyAV | CCTTC | 3 cut(s) | 47, 292, 595 |
| HpyCH4III | ACNGT | 1 cut(s) | 842 |
| HpyCH4IV | ACGT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 8 cut(s) | 26, 46, 281, 398, 467, 607, 764, 920 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 209, 481, 770, 1001, 1010 |
| HpyF3I | CTNAG | 2 cut(s) | 294, 326 |
| HpySE526I | ACGT | 1 cut(s) | 7 |
| Hsp92II | CATG | 2 cut(s) | 711, 717 |
| Ksp22I | TGATCA | 1 cut(s) | 700 |
| Kzo9I | GATC | 4 cut(s) | 121, 668, 700, 729 |
| LguI | GCTCTTC | 1 cut(s) | 827 |
| LmnI | GCTCC | 1 cut(s) | 526 |
| LpnPI | CCDG | 8 cut(s) | 117, 150, 198, 485, 498, 518, 636, 663 |
| Lsp1109I | GCAGC | 3 cut(s) | 398, 748, 760 |
| LweI | GCATC | 1 cut(s) | 471 |
| MaeI | CTAG | 4 cut(s) | 50, 408, 645, 942 |
| MaeII | ACGT | 1 cut(s) | 7 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 4 cut(s) | 123, 670, 702, 731 |
| MboI | GATC | 4 cut(s) | 121, 668, 700, 729 |
| MboII | GAAGA | 6 cut(s) | 88, 111, 263, 844, 870, 873 |
| MfeI | CAATTG | 2 cut(s) | 468, 733 |
| MhlI | GDGCHC | 1 cut(s) | 1015 |
| MluCI | AATT | 6 cut(s) | 235, 313, 385, 423, 468, 733 |
| MmeI | TCCRAC | 1 cut(s) | 946 |
| MroXI | GAANNNNTTC | 1 cut(s) | 953 |
| MseI | TTAA | 3 cut(s) | 258, 273, 453 |
| MslI | CAYNNNNRTG | 1 cut(s) | 712 |
| MspR9I | CCNGG | 1 cut(s) | 651 |
| MunI | CAATTG | 2 cut(s) | 468, 733 |
| MvaI | CCWGG | 1 cut(s) | 651 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 209, 481, 770, 1001, 1010 |
| NdeII | GATC | 4 cut(s) | 121, 668, 700, 729 |
| NlaIII | CATG | 2 cut(s) | 711, 717 |
| NlaIV | GGNNCC | 2 cut(s) | 343, 392 |
| PceI | AGGCCT | 1 cut(s) | 940 |
| PciSI | GCTCTTC | 1 cut(s) | 827 |
| PdmI | GAANNNNTTC | 1 cut(s) | 953 |
| PfeI | GAWTC | 5 cut(s) | 36, 102, 446, 887, 954 |
| PfoI | TCCNGGA | 1 cut(s) | 649 |
| PkrI | GCNGC | 3 cut(s) | 413, 763, 775 |
| Psp1406I | AACGTT | 1 cut(s) | 7 |
| Psp6I | CCWGG | 1 cut(s) | 649 |
| PspGI | CCWGG | 1 cut(s) | 649 |
| PspN4I | GGNNCC | 2 cut(s) | 343, 392 |
| PspPI | GGNCC | 2 cut(s) | 502, 564 |
| RsaI | GTAC | 2 cut(s) | 130, 809 |
| RsaNI | GTAC | 2 cut(s) | 129, 808 |
| RseI | CAYNNNNRTG | 1 cut(s) | 712 |
| SapI | GCTCTTC | 1 cut(s) | 827 |
| SaqAI | TTAA | 3 cut(s) | 258, 273, 453 |
| SatI | GCNGC | 3 cut(s) | 412, 762, 774 |
| Sau3AI | GATC | 4 cut(s) | 121, 668, 700, 729 |
| Sau96I | GGNCC | 2 cut(s) | 502, 564 |
| ScaI | AGTACT | 1 cut(s) | 809 |
| ScrFI | CCNGG | 1 cut(s) | 651 |
| SduI | GDGCHC | 1 cut(s) | 1015 |
| SfaNI | GCATC | 1 cut(s) | 471 |
| SfcI | CTRYAG | 1 cut(s) | 838 |
| SinI | GGWCC | 2 cut(s) | 502, 564 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 712 |
| SmlI | CTYRAG | 1 cut(s) | 93 |
| SmoI | CTYRAG | 1 cut(s) | 93 |
| Sse9I | AATT | 6 cut(s) | 235, 313, 385, 423, 468, 733 |
| SseBI | AGGCCT | 1 cut(s) | 940 |
| SspMI | CTAG | 4 cut(s) | 50, 408, 645, 942 |
| StuI | AGGCCT | 1 cut(s) | 940 |
| StyD4I | CCNGG | 1 cut(s) | 649 |
| StyI | CCWWGG | 1 cut(s) | 941 |
| TaaI | ACNGT | 1 cut(s) | 842 |
| TaiI | ACGT | 1 cut(s) | 10 |
| TaqI | TCGA | 2 cut(s) | 150, 667 |
| TasI | AATT | 6 cut(s) | 235, 313, 385, 423, 468, 733 |
| TatI | WGTACW | 1 cut(s) | 807 |
| TfiI | GAWTC | 5 cut(s) | 36, 102, 446, 887, 954 |
| Tru1I | TTAA | 3 cut(s) | 258, 273, 453 |
| Tru9I | TTAA | 3 cut(s) | 258, 273, 453 |
| TscAI | CASTG | 2 cut(s) | 298, 637 |
| TseI | GCWGC | 3 cut(s) | 411, 761, 773 |
| TspDTI | ATGAA | 2 cut(s) | 696, 702 |
| TspRI | CASTG | 2 cut(s) | 298, 637 |
| VpaK11BI | GGWCC | 2 cut(s) | 502, 564 |
| XmaJI | CCTAGG | 1 cut(s) | 941 |
| XmnI | GAANNNNTTC | 1 cut(s) | 953 |
| XspI | CTAG | 4 cut(s) | 50, 408, 645, 942 |
| ZrmI | AGTACT | 1 cut(s) | 809 |