MuDR family transposase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 54 - 84 | 2.3e-10 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 144 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 124 |
| AgsI | TTSAA | 3 cut(s) | 140, 281, 332 |
| AluBI | AGCT | 1 cut(s) | 242 |
| AluI | AGCT | 1 cut(s) | 242 |
| Alw26I | GTCTC | 1 cut(s) | 13 |
| ApeKI | GCWGC | 1 cut(s) | 239 |
| ApoI | RAATTY | 1 cut(s) | 134 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 336 |
| AsuC2I | CCSGG | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 172 |
| BbsI | GAAGAC | 3 cut(s) | 106, 288, 303 |
| BbvI | GCAGC | 1 cut(s) | 251 |
| BccI | CCATC | 3 cut(s) | 157, 251, 357 |
| BcnI | CCSGG | 1 cut(s) | 412 |
| BcoDI | GTCTC | 1 cut(s) | 13 |
| BisI | GCNGC | 1 cut(s) | 240 |
| BlsI | GCNGC | 1 cut(s) | 241 |
| Bme1390I | CCNGG | 1 cut(s) | 412 |
| BmrFI | CCNGG | 1 cut(s) | 412 |
| BmsI | GCATC | 1 cut(s) | 19 |
| BpiI | GAAGAC | 3 cut(s) | 106, 288, 303 |
| BpmI | CTGGAG | 1 cut(s) | 378 |
| BpuMI | CCSGG | 1 cut(s) | 412 |
| Bsa29I | ATCGAT | 1 cut(s) | 335 |
| BsaAI | YACGTR | 1 cut(s) | 146 |
| BsaBI | GATNNNNATC | 1 cut(s) | 261 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 59, 89 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 124 |
| Bse118I | RCCGGY | 1 cut(s) | 117 |
| Bse1I | ACTGG | 2 cut(s) | 73, 395 |
| Bse3DI | GCAATG | 1 cut(s) | 157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 261 |
| BseCI | ATCGAT | 1 cut(s) | 335 |
| BseGI | GGATG | 1 cut(s) | 345 |
| BseJI | GATNNNNATC | 1 cut(s) | 261 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 124 |
| BseMI | GCAATG | 1 cut(s) | 157 |
| BseMII | CTCAG | 1 cut(s) | 6 |
| BseNI | ACTGG | 2 cut(s) | 73, 395 |
| BseXI | GCAGC | 1 cut(s) | 251 |
| BshVI | ATCGAT | 1 cut(s) | 335 |
| BsiSI | CCGG | 2 cut(s) | 118, 412 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 124 |
| BsmAI | GTCTC | 1 cut(s) | 13 |
| BsmBI | CGTCTC | 1 cut(s) | 13 |
| BsmI | GAATGC | 1 cut(s) | 16 |
| BspCNI | CTCAG | 1 cut(s) | 7 |
| BspDI | ATCGAT | 1 cut(s) | 335 |
| BsrDI | GCAATG | 1 cut(s) | 157 |
| BsrFI | RCCGGY | 1 cut(s) | 117 |
| BsrI | ACTGG | 2 cut(s) | 73, 395 |
| BssAI | RCCGGY | 1 cut(s) | 117 |
| BstBAI | YACGTR | 1 cut(s) | 146 |
| BstDEI | CTNAG | 1 cut(s) | 15 |
| BstF5I | GGATG | 1 cut(s) | 345 |
| BstMAI | GTCTC | 1 cut(s) | 13 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstSCI | CCNGG | 1 cut(s) | 410 |
| BstSNI | TACGTA | 1 cut(s) | 146 |
| BstV1I | GCAGC | 1 cut(s) | 251 |
| BstV2I | GAAGAC | 3 cut(s) | 106, 288, 303 |
| Bsu15I | ATCGAT | 1 cut(s) | 335 |
| BsuTUI | ATCGAT | 1 cut(s) | 335 |
| BtsCI | GGATG | 1 cut(s) | 345 |
| BtsIMutI | CAGTG | 1 cut(s) | 402 |
| Cfr10I | RCCGGY | 1 cut(s) | 117 |
| ClaI | ATCGAT | 1 cut(s) | 335 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CviAII | CATG | 2 cut(s) | 192, 247 |
| CviJI | RGCY | 4 cut(s) | 117, 242, 296, 391 |
| CviKI_1 | RGCY | 4 cut(s) | 117, 242, 296, 391 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DdeI | CTNAG | 1 cut(s) | 15 |
| Eco105I | TACGTA | 1 cut(s) | 146 |
| Esp3I | CGTCTC | 1 cut(s) | 13 |
| FaeI | CATG | 2 cut(s) | 195, 250 |
| FaiI | YATR | 7 cut(s) | 55, 193, 248, 270, 306, 316, 368 |
| FatI | CATG | 2 cut(s) | 191, 246 |
| Fnu4HI | GCNGC | 1 cut(s) | 240 |
| FokI | GGATG | 1 cut(s) | 332 |
| Fsp4HI | GCNGC | 1 cut(s) | 240 |
| GluI | GCNGC | 1 cut(s) | 240 |
| GsuI | CTGGAG | 1 cut(s) | 378 |
| HapII | CCGG | 2 cut(s) | 118, 412 |
| Hin1II | CATG | 2 cut(s) | 195, 250 |
| HinfI | GANTC | 3 cut(s) | 155, 332, 337 |
| HpaII | CCGG | 2 cut(s) | 118, 412 |
| HphI | GGTGA | 2 cut(s) | 16, 172 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188III | TCNNGA | 1 cut(s) | 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| HpyAV | CCTTC | 1 cut(s) | 367 |
| HpyCH4IV | ACGT | 2 cut(s) | 22, 145 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 239, 250 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 1 cut(s) | 15 |
| HpySE526I | ACGT | 2 cut(s) | 22, 145 |
| Hsp92II | CATG | 2 cut(s) | 195, 250 |
| LpnPI | CCDG | 4 cut(s) | 86, 131, 354, 408 |
| Lsp1109I | GCAGC | 1 cut(s) | 251 |
| LweI | GCATC | 1 cut(s) | 19 |
| MaeII | ACGT | 2 cut(s) | 22, 145 |
| MboII | GAAGA | 3 cut(s) | 111, 293, 303 |
| MfeI | CAATTG | 2 cut(s) | 327, 360 |
| MluCI | AATT | 3 cut(s) | 134, 327, 360 |
| MlyI | GAGTC | 1 cut(s) | 149 |
| MmeI | TCCRAC | 2 cut(s) | 57, 111 |
| MnlI | CCTC | 2 cut(s) | 85, 402 |
| MroXI | GAANNNNTTC | 1 cut(s) | 336 |
| MseI | TTAA | 1 cut(s) | 210 |
| MslI | CAYNNNNRTG | 1 cut(s) | 255 |
| MspI | CCGG | 2 cut(s) | 118, 412 |
| MspR9I | CCNGG | 1 cut(s) | 412 |
| MunI | CAATTG | 2 cut(s) | 327, 360 |
| Mva1269I | GAATGC | 1 cut(s) | 16 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NciI | CCSGG | 1 cut(s) | 412 |
| NlaIII | CATG | 2 cut(s) | 195, 250 |
| PctI | GAATGC | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 336 |
| PfeI | GAWTC | 2 cut(s) | 332, 337 |
| PkrI | GCNGC | 1 cut(s) | 241 |
| PleI | GAGTC | 1 cut(s) | 149 |
| PpsI | GAGTC | 1 cut(s) | 149 |
| Ppu21I | YACGTR | 1 cut(s) | 146 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| RseI | CAYNNNNRTG | 1 cut(s) | 255 |
| SaqAI | TTAA | 1 cut(s) | 210 |
| SatI | GCNGC | 1 cut(s) | 240 |
| SchI | GAGTC | 1 cut(s) | 149 |
| ScrFI | CCNGG | 1 cut(s) | 412 |
| SetI | ASST | 5 cut(s) | 25, 96, 148, 217, 244 |
| SfaNI | GCATC | 1 cut(s) | 19 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 255 |
| SnaBI | TACGTA | 1 cut(s) | 146 |
| Sse9I | AATT | 3 cut(s) | 134, 327, 360 |
| StyD4I | CCNGG | 1 cut(s) | 410 |
| TaiI | ACGT | 2 cut(s) | 25, 148 |
| TaqI | TCGA | 1 cut(s) | 335 |
| TasI | AATT | 3 cut(s) | 134, 327, 360 |
| TfiI | GAWTC | 2 cut(s) | 332, 337 |
| Tru1I | TTAA | 1 cut(s) | 210 |
| Tru9I | TTAA | 1 cut(s) | 210 |
| TscAI | CASTG | 1 cut(s) | 402 |
| TseI | GCWGC | 1 cut(s) | 239 |
| TspDTI | ATGAA | 3 cut(s) | 23, 180, 303 |
| TspRI | CASTG | 1 cut(s) | 402 |
| XapI | RAATTY | 1 cut(s) | 134 |
| XmnI | GAANNNNTTC | 1 cut(s) | 336 |