isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF617 | PF04759 | 120 - 290 | 2e-67 | Protein of unknown function, DUF617 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 147 |
| AccBSI | CCGCTC | 1 cut(s) | 246 |
| AccII | CGCG | 2 cut(s) | 387, 614 |
| AccIII | TCCGGA | 2 cut(s) | 488, 663 |
| AclWI | GGATC | 1 cut(s) | 75 |
| AcoI | YGGCCR | 5 cut(s) | 349, 388, 450, 535, 547 |
| AcvI | CACGTG | 1 cut(s) | 649 |
| AcyI | GRCGYC | 2 cut(s) | 144, 617 |
| AfaI | GTAC | 3 cut(s) | 31, 587, 611 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 331, 347, 475, 799 |
| AflIII | ACRYGT | 1 cut(s) | 813 |
| AgsI | TTSAA | 3 cut(s) | 90, 776, 820 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 421 |
| AjiI | CACGTC | 2 cut(s) | 394, 462 |
| AjnI | CCWGG | 2 cut(s) | 419, 575 |
| AluBI | AGCT | 7 cut(s) | 36, 95, 157, 300, 399, 412, 448 |
| AluI | AGCT | 7 cut(s) | 36, 95, 157, 300, 399, 412, 448 |
| Alw26I | GTCTC | 3 cut(s) | 151, 199, 624 |
| AlwI | GGATC | 1 cut(s) | 75 |
| Ama87I | CYCGRG | 2 cut(s) | 443, 509 |
| Aor13HI | TCCGGA | 2 cut(s) | 488, 663 |
| AoxI | GGCC | 6 cut(s) | 349, 388, 450, 535, 547, 804 |
| ApeKI | GCWGC | 1 cut(s) | 300 |
| AspS9I | GGNCC | 3 cut(s) | 423, 579, 842 |
| AsuC2I | CCSGG | 2 cut(s) | 191, 685 |
| AsuHPI | GGTGA | 3 cut(s) | 110, 352, 700 |
| AvaI | CYCGRG | 2 cut(s) | 443, 509 |
| AvaII | GGWCC | 3 cut(s) | 423, 579, 842 |
| BalI | TGGCCA | 1 cut(s) | 452 |
| BanII | GRGCYC | 2 cut(s) | 432, 769 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 593, 625 |
| BauI | CACGAG | 1 cut(s) | 566 |
| BbrPI | CACGTG | 1 cut(s) | 649 |
| BbsI | GAAGAC | 2 cut(s) | 456, 477 |
| BbvI | GCAGC | 1 cut(s) | 287 |
| BccI | CCATC | 3 cut(s) | 70, 323, 821 |
| BceAI | ACGGC | 4 cut(s) | 111, 389, 522, 777 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 292, 326, 490, 524 |
| BciT130I | CCWGG | 2 cut(s) | 421, 577 |
| BcnI | CCSGG | 2 cut(s) | 191, 685 |
| BcoDI | GTCTC | 3 cut(s) | 151, 199, 624 |
| BfaI | CTAG | 2 cut(s) | 33, 48 |
| BglII | AGATCT | 1 cut(s) | 228 |
| BisI | GCNGC | 6 cut(s) | 276, 301, 385, 388, 615, 724 |
| BlsI | GCNGC | 6 cut(s) | 277, 302, 386, 389, 616, 725 |
| BmcAI | AGTACT | 1 cut(s) | 31 |
| Bme1390I | CCNGG | 4 cut(s) | 191, 421, 577, 685 |
| Bme18I | GGWCC | 3 cut(s) | 423, 579, 842 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 421 |
| BmeT110I | CYCGRG | 2 cut(s) | 443, 509 |
| BmgBI | CACGTC | 2 cut(s) | 394, 462 |
| BmgT120I | GGNCC | 3 cut(s) | 423, 579, 842 |
| BmiI | GGNNCC | 4 cut(s) | 367, 532, 682, 791 |
| BmrFI | CCNGG | 4 cut(s) | 191, 421, 577, 685 |
| BmsI | GCATC | 2 cut(s) | 532, 864 |
| BpiI | GAAGAC | 2 cut(s) | 456, 477 |
| BpuMI | CCSGG | 2 cut(s) | 191, 685 |
| BsaAI | YACGTR | 1 cut(s) | 649 |
| BsaHI | GRCGYC | 2 cut(s) | 144, 617 |
| BsaI | GGTCTC | 1 cut(s) | 199 |
| BsaJI | CCNNGG | 5 cut(s) | 189, 385, 419, 538, 684 |
| BsaWI | WCCGGW | 4 cut(s) | 362, 488, 663, 694 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 131, 161, 194, 224, 248, 278, 672, 702 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 331, 347, 475, 799 |
| Bse1I | ACTGG | 2 cut(s) | 70, 647 |
| Bse3DI | GCAATG | 2 cut(s) | 501, 598 |
| BseAI | TCCGGA | 2 cut(s) | 488, 663 |
| BseBI | CCWGG | 2 cut(s) | 421, 577 |
| BseDI | CCNNGG | 5 cut(s) | 189, 385, 419, 538, 684 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 331, 347, 475, 799 |
| BseMI | GCAATG | 2 cut(s) | 501, 598 |
| BseMII | CTCAG | 1 cut(s) | 865 |
| BseNI | ACTGG | 2 cut(s) | 70, 647 |
| BseRI | GAGGAG | 2 cut(s) | 223, 230 |
| BseX3I | CGGCCG | 2 cut(s) | 349, 535 |
| BseXI | GCAGC | 1 cut(s) | 287 |
| Bsh1236I | CGCG | 2 cut(s) | 387, 614 |
| Bsh1285I | CGRYCG | 2 cut(s) | 352, 538 |
| BshFI | GGCC | 6 cut(s) | 351, 390, 452, 537, 549, 806 |
| BsiEI | CGRYCG | 2 cut(s) | 352, 538 |
| BsiHKCI | CYCGRG | 2 cut(s) | 443, 509 |
| BsiSI | CCGG | 9 cut(s) | 191, 352, 363, 489, 534, 550, 664, 684, 695 |
| BslFI | GGGAC | 2 cut(s) | 44, 172 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 331, 347, 475, 799 |
| BsmAI | GTCTC | 3 cut(s) | 151, 199, 624 |
| BsmBI | CGTCTC | 2 cut(s) | 151, 624 |
| BsmFI | GGGAC | 2 cut(s) | 44, 172 |
| BsnI | GGCC | 6 cut(s) | 351, 390, 452, 537, 549, 806 |
| Bso31I | GGTCTC | 1 cut(s) | 199 |
| BsoBI | CYCGRG | 2 cut(s) | 443, 509 |
| Bsp1286I | GDGCHC | 2 cut(s) | 432, 769 |
| Bsp13I | TCCGGA | 2 cut(s) | 488, 663 |
| Bsp143I | GATC | 2 cut(s) | 80, 228 |
| BspANI | GGCC | 6 cut(s) | 351, 390, 452, 537, 549, 806 |
| BspCNI | CTCAG | 1 cut(s) | 864 |
| BspEI | TCCGGA | 2 cut(s) | 488, 663 |
| BspFNI | CGCG | 2 cut(s) | 387, 614 |
| BspLI | GGNNCC | 4 cut(s) | 367, 532, 682, 791 |
| BspPI | GGATC | 1 cut(s) | 75 |
| BspTNI | GGTCTC | 1 cut(s) | 199 |
| BsrBI | CCGCTC | 1 cut(s) | 246 |
| BsrDI | GCAATG | 2 cut(s) | 501, 598 |
| BsrI | ACTGG | 2 cut(s) | 70, 647 |
| BssECI | CCNNGG | 5 cut(s) | 189, 385, 419, 538, 684 |
| BssMI | GATC | 2 cut(s) | 80, 228 |
| BssNI | GRCGYC | 2 cut(s) | 144, 617 |
| BssSI | CACGAG | 1 cut(s) | 566 |
| Bst2BI | CACGAG | 1 cut(s) | 566 |
| Bst2UI | CCWGG | 2 cut(s) | 421, 577 |
| Bst4CI | ACNGT | 1 cut(s) | 661 |
| Bst6I | CTCTTC | 3 cut(s) | 91, 184, 325 |
| BstACI | GRCGYC | 2 cut(s) | 144, 617 |
| BstBAI | YACGTR | 1 cut(s) | 649 |
| BstC8I | GCNNGC | 4 cut(s) | 273, 298, 312, 450 |
| BstDEI | CTNAG | 2 cut(s) | 851, 866 |
| BstDSI | CCRYGG | 2 cut(s) | 385, 538 |
| BstEII | GGTNACC | 1 cut(s) | 377 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 473 |
| BstFNI | CGCG | 2 cut(s) | 387, 614 |
| BstKTI | GATC | 2 cut(s) | 83, 231 |
| BstMAI | GTCTC | 3 cut(s) | 151, 199, 624 |
| BstMBI | GATC | 2 cut(s) | 80, 228 |
| BstMCI | CGRYCG | 2 cut(s) | 352, 538 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 396, 436, 445 |
| BstNI | CCWGG | 2 cut(s) | 421, 577 |
| BstNSI | RCATGY | 2 cut(s) | 630, 817 |
| BstPI | GGTNACC | 1 cut(s) | 377 |
| BstSCI | CCNGG | 4 cut(s) | 189, 419, 575, 683 |
| BstUI | CGCG | 2 cut(s) | 387, 614 |
| BstV1I | GCAGC | 1 cut(s) | 287 |
| BstV2I | GAAGAC | 2 cut(s) | 456, 477 |
| BstX2I | RGATCY | 2 cut(s) | 80, 228 |
| BstYI | RGATCY | 2 cut(s) | 80, 228 |
| BstZI | CGGCCG | 2 cut(s) | 349, 535 |
| BsuRI | GGCC | 6 cut(s) | 351, 390, 452, 537, 549, 806 |
| BtgI | CCRYGG | 2 cut(s) | 385, 538 |
| BtrI | CACGTC | 2 cut(s) | 394, 462 |
| Cac8I | GCNNGC | 4 cut(s) | 273, 298, 312, 450 |
| Cfr13I | GGNCC | 3 cut(s) | 423, 579, 842 |
| Cfr42I | CCGCGG | 1 cut(s) | 388 |
| CseI | GACGC | 1 cut(s) | 606 |
| Csp6I | GTAC | 3 cut(s) | 30, 586, 610 |
| CviAII | CATG | 5 cut(s) | 454, 583, 627, 760, 814 |
| CviQI | GTAC | 3 cut(s) | 30, 586, 610 |
| DdeI | CTNAG | 2 cut(s) | 851, 866 |
| DpnI | GATC | 2 cut(s) | 82, 230 |
| DpnII | GATC | 2 cut(s) | 80, 228 |
| DriI | GACNNNNNGTC | 1 cut(s) | 421 |
| EaeI | YGGCCR | 5 cut(s) | 349, 388, 450, 535, 547 |
| EagI | CGGCCG | 2 cut(s) | 349, 535 |
| Eam1104I | CTCTTC | 3 cut(s) | 91, 184, 325 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 421 |
| EarI | CTCTTC | 3 cut(s) | 91, 184, 325 |
| EclXI | CGGCCG | 2 cut(s) | 349, 535 |
| Eco147I | AGGCCT | 1 cut(s) | 806 |
| Eco24I | GRGCYC | 2 cut(s) | 432, 769 |
| Eco31I | GGTCTC | 1 cut(s) | 199 |
| Eco47I | GGWCC | 3 cut(s) | 423, 579, 842 |
| Eco52I | CGGCCG | 2 cut(s) | 349, 535 |
| Eco72I | CACGTG | 1 cut(s) | 649 |
| Eco88I | CYCGRG | 2 cut(s) | 443, 509 |
| Eco91I | GGTNACC | 1 cut(s) | 377 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 473 |
| EcoO109I | RGGNCCY | 1 cut(s) | 842 |
| EcoO65I | GGTNACC | 1 cut(s) | 377 |
| EcoRII | CCWGG | 2 cut(s) | 419, 575 |
| EcoT38I | GRGCYC | 2 cut(s) | 432, 769 |
| Esp3I | CGTCTC | 2 cut(s) | 151, 624 |
| FaeI | CATG | 5 cut(s) | 457, 586, 630, 763, 817 |
| FaiI | YATR | 6 cut(s) | 455, 584, 628, 761, 815, 874 |
| FaqI | GGGAC | 2 cut(s) | 44, 172 |
| FatI | CATG | 5 cut(s) | 453, 582, 626, 759, 813 |
| FauI | CCCGC | 2 cut(s) | 301, 719 |
| Fnu4HI | GCNGC | 6 cut(s) | 276, 301, 385, 388, 615, 724 |
| FriOI | GRGCYC | 2 cut(s) | 432, 769 |
| Fsp4HI | GCNGC | 6 cut(s) | 276, 301, 385, 388, 615, 724 |
| FspBI | CTAG | 2 cut(s) | 33, 48 |
| GluI | GCNGC | 6 cut(s) | 276, 301, 385, 388, 615, 724 |
| HaeIII | GGCC | 6 cut(s) | 351, 390, 452, 537, 549, 806 |
| HapII | CCGG | 9 cut(s) | 191, 352, 363, 489, 534, 550, 664, 684, 695 |
| HgaI | GACGC | 1 cut(s) | 606 |
| Hin1I | GRCGYC | 2 cut(s) | 144, 617 |
| Hin1II | CATG | 5 cut(s) | 457, 586, 630, 763, 817 |
| HinfI | GANTC | 7 cut(s) | 163, 492, 512, 635, 691, 797, 820 |
| HpaII | CCGG | 9 cut(s) | 191, 352, 363, 489, 534, 550, 664, 684, 695 |
| HphI | GGTGA | 3 cut(s) | 110, 352, 700 |
| Hpy166II | GTNNAC | 2 cut(s) | 459, 703 |
| Hpy188I | TCNGA | 7 cut(s) | 80, 99, 427, 517, 640, 736, 802 |
| Hpy188III | TCNNGA | 7 cut(s) | 443, 489, 509, 566, 664, 824, 845 |
| Hpy8I | GTNNAC | 2 cut(s) | 459, 703 |
| Hpy99I | CGWCG | 4 cut(s) | 132, 146, 710, 736 |
| HpyCH4III | ACNGT | 1 cut(s) | 661 |
| HpyCH4IV | ACGT | 4 cut(s) | 144, 393, 461, 648 |
| HpyCH4V | TGCA | 2 cut(s) | 303, 591 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 396, 436, 445 |
| HpyF3I | CTNAG | 2 cut(s) | 851, 866 |
| HpySE526I | ACGT | 4 cut(s) | 144, 393, 461, 648 |
| Hsp92I | GRCGYC | 2 cut(s) | 144, 617 |
| Hsp92II | CATG | 5 cut(s) | 457, 586, 630, 763, 817 |
| Kpn2I | TCCGGA | 2 cut(s) | 488, 663 |
| KspI | CCGCGG | 1 cut(s) | 388 |
| Kzo9I | GATC | 2 cut(s) | 80, 228 |
| LmnI | GCTCC | 4 cut(s) | 41, 666, 680, 789 |
| Lsp1109I | GCAGC | 1 cut(s) | 287 |
| LweI | GCATC | 2 cut(s) | 532, 864 |
| MaeI | CTAG | 2 cut(s) | 33, 48 |
| MaeII | ACGT | 4 cut(s) | 144, 393, 461, 648 |
| MaeIII | GTNAC | 4 cut(s) | 334, 358, 377, 794 |
| MalI | GATC | 2 cut(s) | 82, 230 |
| MbiI | CCGCTC | 1 cut(s) | 246 |
| MboI | GATC | 2 cut(s) | 80, 228 |
| MboII | GAAGA | 6 cut(s) | 78, 171, 312, 456, 477, 850 |
| MflI | RGATCY | 2 cut(s) | 80, 228 |
| MhlI | GDGCHC | 2 cut(s) | 432, 769 |
| MlsI | TGGCCA | 1 cut(s) | 452 |
| MluNI | TGGCCA | 1 cut(s) | 452 |
| MlyI | GAGTC | 4 cut(s) | 486, 521, 644, 791 |
| MmeI | TCCRAC | 4 cut(s) | 174, 658, 663, 714 |
| Mox20I | TGGCCA | 1 cut(s) | 452 |
| MroI | TCCGGA | 2 cut(s) | 488, 663 |
| MscI | TGGCCA | 1 cut(s) | 452 |
| MseI | TTAA | 1 cut(s) | 474 |
| Msp20I | TGGCCA | 1 cut(s) | 452 |
| MspA1I | CMGCKG | 2 cut(s) | 300, 387 |
| MspI | CCGG | 9 cut(s) | 191, 352, 363, 489, 534, 550, 664, 684, 695 |
| MspR9I | CCNGG | 4 cut(s) | 191, 421, 577, 685 |
| MvaI | CCWGG | 2 cut(s) | 421, 577 |
| MvnI | CGCG | 2 cut(s) | 387, 614 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 396, 436, 445 |
| NciI | CCSGG | 2 cut(s) | 191, 685 |
| NdeII | GATC | 2 cut(s) | 80, 228 |
| NlaIII | CATG | 5 cut(s) | 457, 586, 630, 763, 817 |
| NlaIV | GGNNCC | 4 cut(s) | 367, 532, 682, 791 |
| NmeAIII | GCCGAG | 1 cut(s) | 327 |
| NmuCI | GTSAC | 3 cut(s) | 334, 358, 794 |
| NspI | RCATGY | 2 cut(s) | 630, 817 |
| PaeR7I | CTCGAG | 2 cut(s) | 443, 509 |
| PceI | AGGCCT | 1 cut(s) | 806 |
| PciI | ACATGT | 1 cut(s) | 813 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 775 |
| PfeI | GAWTC | 3 cut(s) | 163, 691, 820 |
| PkrI | GCNGC | 6 cut(s) | 277, 302, 386, 389, 616, 725 |
| PleI | GAGTC | 4 cut(s) | 486, 520, 643, 791 |
| PmaCI | CACGTG | 1 cut(s) | 649 |
| PmlI | CACGTG | 1 cut(s) | 649 |
| PpsI | GAGTC | 4 cut(s) | 486, 520, 643, 791 |
| Ppu21I | YACGTR | 1 cut(s) | 649 |
| PpuMI | RGGWCCY | 1 cut(s) | 842 |
| PscI | ACATGT | 1 cut(s) | 813 |
| Psp5II | RGGWCCY | 1 cut(s) | 842 |
| Psp6I | CCWGG | 2 cut(s) | 419, 575 |
| PspCI | CACGTG | 1 cut(s) | 649 |
| PspEI | GGTNACC | 1 cut(s) | 377 |
| PspGI | CCWGG | 2 cut(s) | 419, 575 |
| PspN4I | GGNNCC | 4 cut(s) | 367, 532, 682, 791 |
| PspPI | GGNCC | 3 cut(s) | 423, 579, 842 |
| PspPPI | RGGWCCY | 1 cut(s) | 842 |
| PsuI | RGATCY | 2 cut(s) | 80, 228 |
| PvuII | CAGCTG | 1 cut(s) | 300 |
| RsaI | GTAC | 3 cut(s) | 31, 587, 611 |
| RsaNI | GTAC | 3 cut(s) | 30, 586, 610 |
| SacII | CCGCGG | 1 cut(s) | 388 |
| SaqAI | TTAA | 1 cut(s) | 474 |
| SatI | GCNGC | 6 cut(s) | 276, 301, 385, 388, 615, 724 |
| Sau3AI | GATC | 2 cut(s) | 80, 228 |
| Sau96I | GGNCC | 3 cut(s) | 423, 579, 842 |
| ScaI | AGTACT | 1 cut(s) | 31 |
| SchI | GAGTC | 4 cut(s) | 486, 521, 644, 791 |
| ScrFI | CCNGG | 4 cut(s) | 191, 421, 577, 685 |
| SduI | GDGCHC | 2 cut(s) | 432, 769 |
| SfaNI | GCATC | 2 cut(s) | 532, 864 |
| Sfr274I | CTCGAG | 2 cut(s) | 443, 509 |
| Sfr303I | CCGCGG | 1 cut(s) | 388 |
| SgrBI | CCGCGG | 1 cut(s) | 388 |
| SinI | GGWCC | 3 cut(s) | 423, 579, 842 |
| SlaI | CTCGAG | 2 cut(s) | 443, 509 |
| SmlI | CTYRAG | 2 cut(s) | 443, 509 |
| SmoI | CTYRAG | 2 cut(s) | 443, 509 |
| SseBI | AGGCCT | 1 cut(s) | 806 |
| SspMI | CTAG | 2 cut(s) | 33, 48 |
| StuI | AGGCCT | 1 cut(s) | 806 |
| StyD4I | CCNGG | 4 cut(s) | 189, 419, 575, 683 |
| TaaI | ACNGT | 1 cut(s) | 661 |
| TaiI | ACGT | 4 cut(s) | 147, 396, 464, 651 |
| TaqI | TCGA | 4 cut(s) | 201, 414, 444, 510 |
| TaqII | GACCGA | 1 cut(s) | 322 |
| TatI | WGTACW | 2 cut(s) | 29, 585 |
| TauI | GCSGC | 5 cut(s) | 278, 387, 390, 617, 726 |
| TfiI | GAWTC | 3 cut(s) | 163, 691, 820 |
| Tru1I | TTAA | 1 cut(s) | 474 |
| Tru9I | TTAA | 1 cut(s) | 474 |
| TseFI | GTSAC | 3 cut(s) | 334, 358, 794 |
| TseI | GCWGC | 1 cut(s) | 300 |
| Tsp45I | GTSAC | 3 cut(s) | 334, 358, 794 |
| TspDTI | ATGAA | 2 cut(s) | 17, 171 |
| VpaK11BI | GGWCC | 3 cut(s) | 423, 579, 842 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 473 |
| XceI | RCATGY | 2 cut(s) | 630, 817 |
| XhoI | CTCGAG | 2 cut(s) | 443, 509 |
| XspI | CTAG | 2 cut(s) | 33, 48 |
| ZraI | GACGTC | 1 cut(s) | 145 |
| ZrmI | AGTACT | 1 cut(s) | 31 |