FvH4_6g26790

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0003612
Physical Location & Seq
Reverse (-)
20489149 .. 20493305
4157 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g26790.t1

Sequence Viewer

Length: 2427 bp
ATGGCTAGAGGCCCTGTAAGTTCCCTGTTTCGGATTTATGGCTGTAAGAAAAGCATATCTAGGCTTAGGGTTTTGATCTGGAACCAATATGACCGCTCTGTATCACCAAAGTTCACATCTTTTCCTGCTTTAGATTCCCAAAACTGTTCGTATTCCACGAGCTTAGTGGATCAAGTTTGTCTTAGATTCAATCCACATAGCCCAAAATATTTGGGGTGTGATACTGTTTATGTCAAGCCATTTTCAACTGGTGTGGAAGATGGGCATGAGGATGAGGATGTGAGTGATAGTAGAGCAGTGGTTGATGAATTTGATGCGGATGTGGGGAAGGTTGTGGGCCTTGATCTCTCGAGTGAGGATAAGGTGGATTATATTTCATCGGAATCGGAAGATAGTGATGAAGGTGAGAATGAGGCTGTGGTTAGTGATTTGATGGTGGAAGAGGGTAGTGATGAGAATGTGAGTTCAATGAGAGCGGTGAGCTTTCAACATGTTGCGTCGCGCGACCCTGTTGTGCTGTATAGGGAGCTTTGTAATAATGAGAAGGGCGCAAAGCAGTCGCGGAGTGATTGGGAGACTCTTCAAGAGATGTTTGGTTATTTTGGAAAATCAGGTTGGGCGACTGATCAGGCTCTTGCAATATACATTGGCAGGTCATTTTTTCCTCATGCTGTGCATAAGTTTCGGAGCTTCTTCTTCAAGAAGTGTTCTGCTGATGTTGCCAAGTATTTGGTGTCCCTTGGTCCATCTAATGATGCAGTTAAGTTTTTATTTCCCTTGTTTGTTGAATATTGTTTGGAAGAGTTTCCTGATGAGATTAAGCGTTTTCGTTCTATGGTTGCATCAGCGGATCTCACAAAGCCCCATACTTGGTTTCCATTTGCACGGGCTATGAAGCGTAAGATAGTTTATCACTGTGGTCCAACCAATAGTGGGAAAACTTTCAATGCCTTGCGACGATTTATGGAAGCAAAGAAGGGTATCTACTGCAGTCCTCTGAGATTATTGGCTATGGAAGTCTTTGACAAAGTTAATGCAAATGGGGTGTATTGTAGTCTTCACACAGGGCAAGAAAAGAAATTTGTCCCATTCTCAAATCATGCTGCTTGTACAGTAGAAATGGTGTCAACCGACGAAATGTATGATGTTGCTGTCATTGATGAAATTCAGATGATGGCAGATCCATATAGAGGTTTTGCATGGACGCGAGCATTACTTGGCTTAAAGGCCGATGAGATACATTTGTGTGGAGATCCAAGCGTTCTCAACGTTGTTCGAAAGATCTGTTCAGAGACTGGTGATGAGTTGTATGAGCAGCATTATGGGAGGTTTAAGCCATTGGTGGTTGAAGCAAAAACGCTATTGGGAGATCTTAAGAATGTTAGGTCTGGAGATTGTGTGGTTGCTTTTTCAAGAAGAGAGGTATTTGAGGTTAAAATGGCAATTGAAAAACACACCAACCACCGGTGTTGTGTCATTTATGGTGCCTTGCCGCCAGAAACTCGTAGACAGCAGGCAAATTTATTTAATGATCAAGATAATGAATATGATGTTCTTGTTTCTACTGACGCAGTGGGAATGGGTCTGAATCTTAATATTAGGAGGGTTGTATTCTATAGTCTTGCAAAATACAATGGTGACAAAGTTCTCCCAGTTCCAGCATCTCAGGTGAAGCAAATTGCTGGAAGAGCTGGTCGGAGAGGAAGTATCTATCCAGATGGACTTACTACCACATTGAATTTAGATGATCTGGATTACTTGATCGAGTGTCTGAAGCAGCCTTTTGAAGAAGTTAAGAAAGTGGGCTTGTTTCCTTTCTATGAGCAGGTTGAGCTATTTGCAGGGCAAATTCCTAACATTACATTCTCCCAGCTACTTGAAAAATTTAGTGAAAATTGCCGCCTGGATGGGTCATACTTCTTGTGTCGACATGATCATATAAAGAAGGTTGCAAATATGTTACAGAAGATTCAGGCATTATCTCTGGAGGATCGTTTTAACTTCTGTTTTGCCCCAGTAAATATCAGAGACCCAAAAGCTATGTTCCATCTTCTAAAGTTTGCTCAGTCATATAGCCAGAATCTCCCTGTCAATATTGCTATGGGAATTCCAACGGATTCTGCTCGTAGTGATAAGGAACTCTTGGATCTTGAGACTAAGCATCAAGTGTTGTCTATGTATATGTGGTTGTCACACCACTTCAAGGAAGAAACTTTTCCGTATGTGAAGAAGGCTGAGGCAATGGCAACAGATATTGCAGAATTGCTGGGTCAGTCTCTAGCCAAAGCTAACTGGAAACCAGAATCAAGGCAGGCATCAAAGCCTCAACAGAAGGAAGATAGTTATGAGAGGCCATTGTCACGCATCAAACAGTATCAGAAGAACAGGTCTTTAGAATCTGAGCACTCAGAGAAGGTAGCTGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

809

Amino Acids

91.75

Weight (kDa)

6.11

Isoelectric Point (pI)

46.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DExH18_N PF23703 192 - 276 6.9e-40 DExH-box ATP-dependent RNA helicase DExH18, N-terminal
DEXQc_Suv3 PF22527 288 - 441 1.6e-69 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 460 - 568 2.9e-15 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 650 - 692 1.9e-17 Suv3 C-terminal domain 1
SUV3_C PF12513 714 - 761 6.1e-11 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 642, 1816
AccB1I GGYRCC 1 cut(s) 1484
AccBSI CCGCTC 2 cut(s) 96, 476
AccI GTMKAC 2 cut(s) 1507, 1927
AccII CGCG 4 cut(s) 502, 504, 562, 1207
AciI CCGC 7 cut(s) 94, 317, 476, 562, 848, 1493, 1900
AclI AACGTT 1 cut(s) 1269
AclWI GGATC 6 cut(s) 177, 858, 1175, 1247, 1998, 2154
AcsI RAATTY 8 cut(s) 308, 1079, 1164, 1519, 1738, 1848, 1883, 2106
AcuI CTGAAG 1 cut(s) 1793
AfaI GTAC 1 cut(s) 1111
AfiI CCNNNNNNNGG 6 cut(s) 30, 870, 933, 1190, 1464, 2203
AflII CTTAAG 1 cut(s) 1373
AflIII ACRYGT 1 cut(s) 490
AgeI ACCGGT 1 cut(s) 1464
AjnI CCWGG 1 cut(s) 1902
AjuI GAANNNNNNNTTGG 2 cut(s) 598, 630
Alw21I GWGCWC 1 cut(s) 2406
Alw26I GTCTC 5 cut(s) 569, 1286, 2022, 2147, 2280
AlwI GGATC 6 cut(s) 177, 858, 1175, 1247, 1998, 2154
AlwNI CAGNNNCTG 1 cut(s) 1295
Ama87I CYCGRG 1 cut(s) 349
AoxI GGCC 4 cut(s) 10, 337, 1227, 2351
ApeKI GCWGC 4 cut(s) 1103, 1315, 1777, 2420
ApoI RAATTY 8 cut(s) 308, 1079, 1164, 1519, 1738, 1848, 1883, 2106
AsiGI ACCGGT 1 cut(s) 1464
Asp700I GAANNNNTTC 3 cut(s) 804, 941, 2214
AspLEI GCGC 2 cut(s) 504, 551
AspS9I GGNCC 4 cut(s) 11, 337, 743, 920
AsuHPI GGTGA 6 cut(s) 96, 416, 490, 1310, 1649, 1681
AsuII TTCGAA 1 cut(s) 1276
AvaI CYCGRG 1 cut(s) 349
AvaII GGWCC 2 cut(s) 743, 920
BaeI ACNNNNGTAYC 2 cut(s) 1229, 1262
BanI GGYRCC 1 cut(s) 1484
BarI GAAGNNNNNNTAC 2 cut(s) 968, 1000
BauI CACGAG 1 cut(s) 157
BbsI GAAGAC 1 cut(s) 1049
Bbv12I GWGCWC 1 cut(s) 2406
BbvCI CCTCAGC 1 cut(s) 2235
BbvI GCAGC 4 cut(s) 1090, 1327, 1789, 2407
BccI CCATC 7 cut(s) 254, 427, 754, 1168, 1712, 1901, 2055
BcgI CGANNNNNNTGC 4 cut(s) 540, 574, 665, 699
BciT130I CCWGG 1 cut(s) 1904
BclI TGATCA 3 cut(s) 625, 1531, 1933
BcoDI GTCTC 5 cut(s) 569, 1286, 2022, 2147, 2280
BfaI CTAG 4 cut(s) 6, 60, 2279, 2425
BfmI CTRYAG 2 cut(s) 988, 1615
BfrI CTTAAG 1 cut(s) 1373
BfuAI ACCTGC 2 cut(s) 642, 1816
BglII AGATCT 2 cut(s) 1281, 1369
BisI GCNGC 6 cut(s) 1104, 1316, 1493, 1778, 1900, 2421
BlsI GCNGC 6 cut(s) 1105, 1317, 1494, 1779, 1901, 2422
Bme1390I CCNGG 1 cut(s) 1904
Bme18I GGWCC 2 cut(s) 743, 920
BmeT110I CYCGRG 1 cut(s) 349
BmgT120I GGNCC 4 cut(s) 11, 337, 743, 920
BmiI GGNNCC 2 cut(s) 83, 1486
BmrFI CCNGG 1 cut(s) 1904
BmrI ACTGGG 2 cut(s) 1646, 2009
BmsI GCATC 7 cut(s) 304, 745, 851, 1670, 2170, 2324, 2373
BmuI ACTGGG 2 cut(s) 1646, 2009
BpiI GAAGAC 1 cut(s) 1049
BpmI CTGGAG 2 cut(s) 1410, 2006
Bpu10I CCTNAGC 2 cut(s) 65, 2235
Bpu14I TTCGAA 1 cut(s) 1276
BpuEI CTTGAG 1 cut(s) 2171
BsaI GGTCTC 1 cut(s) 2022
BsaJI CCNNGG 1 cut(s) 739
BsaWI WCCGGW 1 cut(s) 1464
BsaXI ACNNNNNCTCC 4 cut(s) 1383, 1413, 1690, 1720
Bsc4I CCNNNNNNNGG 6 cut(s) 30, 870, 933, 1190, 1464, 2203
Bse118I RCCGGY 1 cut(s) 1464
Bse1I ACTGG 5 cut(s) 253, 1300, 1652, 2015, 2297
Bse3DI GCAATG 1 cut(s) 2247
BseBI CCWGG 1 cut(s) 1904
BseDI CCNNGG 1 cut(s) 739
BseGI GGATG 4 cut(s) 277, 283, 325, 1912
BseLI CCNNNNNNNGG 6 cut(s) 30, 870, 933, 1190, 1464, 2203
BseMI GCAATG 1 cut(s) 2247
BseMII CTCAG 6 cut(s) 989, 1679, 2078, 2226, 2391, 2421
BseNI ACTGG 5 cut(s) 253, 1300, 1652, 2015, 2297
BseXI GCAGC 4 cut(s) 1090, 1327, 1789, 2407
BseYI CCCAGC 2 cut(s) 1869, 2266
Bsh1236I CGCG 4 cut(s) 502, 504, 562, 1207
BshFI GGCC 4 cut(s) 12, 339, 1229, 2353
BshNI GGYRCC 1 cut(s) 1484
BshTI ACCGGT 1 cut(s) 1464
BsiHKAI GWGCWC 1 cut(s) 2406
BsiHKCI CYCGRG 1 cut(s) 349
BsiSI CCGG 1 cut(s) 1465
BslFI GGGAC 2 cut(s) 721, 1070
BslI CCNNNNNNNGG 6 cut(s) 30, 870, 933, 1190, 1464, 2203
BsmAI GTCTC 5 cut(s) 569, 1286, 2022, 2147, 2280
BsmFI GGGAC 2 cut(s) 721, 1070
BsnI GGCC 4 cut(s) 12, 339, 1229, 2353
Bso31I GGTCTC 1 cut(s) 2022
BsoBI CYCGRG 1 cut(s) 349
Bsp119I TTCGAA 1 cut(s) 1276
Bsp1286I GDGCHC 1 cut(s) 2406
Bsp1407I TGTACA 1 cut(s) 1109
BspACI CCGC 7 cut(s) 94, 317, 476, 562, 848, 1493, 1900
BspANI GGCC 4 cut(s) 12, 339, 1229, 2353
BspCNI CTCAG 6 cut(s) 990, 1678, 2077, 2227, 2392, 2420
BspFNI CGCG 4 cut(s) 502, 504, 562, 1207
BspLI GGNNCC 2 cut(s) 83, 1486
BspMAI CTGCAG 1 cut(s) 992
BspMI ACCTGC 2 cut(s) 642, 1816
BspPI GGATC 6 cut(s) 177, 858, 1175, 1247, 1998, 2154
BspQI GCTCTTC 1 cut(s) 1681
BspT104I TTCGAA 1 cut(s) 1276
BspT107I GGYRCC 1 cut(s) 1484
BspTI CTTAAG 1 cut(s) 1373
BspTNI GGTCTC 1 cut(s) 2022
BsrBI CCGCTC 2 cut(s) 96, 476
BsrDI GCAATG 1 cut(s) 2247
BsrFI RCCGGY 1 cut(s) 1464
BsrGI TGTACA 1 cut(s) 1109
BsrI ACTGG 5 cut(s) 253, 1300, 1652, 2015, 2297
BssAI RCCGGY 1 cut(s) 1464
BssECI CCNNGG 1 cut(s) 739
BssSI CACGAG 1 cut(s) 157
BssT1I CCWWGG 1 cut(s) 739
Bst2BI CACGAG 1 cut(s) 157
Bst2UI CCWGG 1 cut(s) 1904
Bst4CI ACNGT 5 cut(s) 146, 226, 917, 1114, 2373
Bst6I CTCTTC 5 cut(s) 435, 585, 795, 1411, 1681
BstAFI CTTAAG 1 cut(s) 1373
BstAUI TGTACA 1 cut(s) 1109
BstBI TTCGAA 1 cut(s) 1276
BstC8I GCNNGC 3 cut(s) 1209, 1515, 2313
BstF5I GGATG 4 cut(s) 277, 283, 325, 1912
BstFNI CGCG 4 cut(s) 502, 504, 562, 1207
BstHHI GCGC 2 cut(s) 504, 551
BstMAI GTCTC 5 cut(s) 569, 1286, 2022, 2147, 2280
BstMWI GCNNNNNNNGC 3 cut(s) 719, 1688, 1831
BstNI CCWGG 1 cut(s) 1904
BstNSI RCATGY 1 cut(s) 494
BstSCI CCNGG 1 cut(s) 1902
BstSFI CTRYAG 2 cut(s) 988, 1615
BstUI CGCG 4 cut(s) 502, 504, 562, 1207
BstV1I GCAGC 4 cut(s) 1090, 1327, 1789, 2407
BstV2I GAAGAC 1 cut(s) 1049
BstX2I RGATCY 6 cut(s) 850, 1180, 1252, 1281, 1369, 2146
BstXI CCANNNNNNTGG 1 cut(s) 730
BstYI RGATCY 6 cut(s) 850, 1180, 1252, 1281, 1369, 2146
BsuRI GGCC 4 cut(s) 12, 339, 1229, 2353
BtsCI GGATG 4 cut(s) 277, 283, 325, 1912
BtsI GCAGTG 2 cut(s) 303, 1578
BtsIMutI CAGTG 3 cut(s) 303, 913, 1578
BveI ACCTGC 2 cut(s) 642, 1816
Cac8I GCNNGC 3 cut(s) 1209, 1515, 2313
CaiI CAGNNNCTG 1 cut(s) 1295
CfoI GCGC 2 cut(s) 504, 551
Cfr10I RCCGGY 1 cut(s) 1464
Cfr13I GGNCC 4 cut(s) 11, 337, 743, 920
CseI GACGC 3 cut(s) 486, 1213, 1577
Csp6I GTAC 1 cut(s) 1110
CspAI ACCGGT 1 cut(s) 1464
CspCI CAANNNNNGTGG 4 cut(s) 234, 269, 1451, 1486
CviAII CATG 6 cut(s) 266, 491, 668, 1100, 1200, 1931
CviQI GTAC 1 cut(s) 1110
Eam1104I CTCTTC 5 cut(s) 435, 585, 795, 1411, 1681
EarI CTCTTC 5 cut(s) 435, 585, 795, 1411, 1681
Eco130I CCWWGG 1 cut(s) 739
Eco31I GGTCTC 1 cut(s) 2022
Eco47I GGWCC 2 cut(s) 743, 920
Eco57I CTGAAG 1 cut(s) 1793
Eco88I CYCGRG 1 cut(s) 349
EcoO109I RGGNCCY 1 cut(s) 11
EcoRI GAATTC 1 cut(s) 2106
EcoRII CCWGG 1 cut(s) 1902
EcoT14I CCWWGG 1 cut(s) 739
ErhI CCWWGG 1 cut(s) 739
FaeI CATG 6 cut(s) 269, 494, 671, 1103, 1203, 1934
FalI AAGNNNNNCTT 4 cut(s) 165, 197, 2126, 2158
FaqI GGGAC 2 cut(s) 721, 1070
FatI CATG 6 cut(s) 265, 490, 667, 1099, 1199, 1930
FbaI TGATCA 3 cut(s) 625, 1531, 1933
FblI GTMKAC 2 cut(s) 1507, 1927
Fnu4HI GCNGC 6 cut(s) 1104, 1316, 1493, 1778, 1900, 2421
FokI GGATG 4 cut(s) 284, 290, 332, 1919
Fsp4HI GCNGC 6 cut(s) 1104, 1316, 1493, 1778, 1900, 2421
FspBI CTAG 4 cut(s) 6, 60, 2279, 2425
GlaI GCGC 2 cut(s) 503, 550
GluI GCNGC 6 cut(s) 1104, 1316, 1493, 1778, 1900, 2421
GsaI CCCAGC 2 cut(s) 1873, 2270
GsuI CTGGAG 2 cut(s) 1410, 2006
HaeIII GGCC 4 cut(s) 12, 339, 1229, 2353
HapII CCGG 1 cut(s) 1465
HgaI GACGC 3 cut(s) 486, 1213, 1577
HhaI GCGC 2 cut(s) 504, 551
Hin1II CATG 6 cut(s) 269, 494, 671, 1103, 1203, 1934
Hin6I GCGC 2 cut(s) 502, 549
HinP1I GCGC 2 cut(s) 502, 549
HincII GTYRAC 2 cut(s) 1128, 1928
HindII GTYRAC 2 cut(s) 1128, 1928
HpaII CCGG 1 cut(s) 1465
HphI GGTGA 6 cut(s) 96, 416, 490, 1310, 1649, 1681
Hpy166II GTNNAC 4 cut(s) 114, 1128, 1508, 1928
Hpy8I GTNNAC 4 cut(s) 114, 1128, 1508, 1928
Hpy99I CGWCG 3 cut(s) 502, 960, 1136
HpyAV CCTTC 8 cut(s) 322, 395, 538, 970, 1939, 2224, 2326, 2407
HpyCH4III ACNGT 5 cut(s) 146, 226, 917, 1114, 2373
HpyCH4IV ACGT 1 cut(s) 1269
HpyF10VI GCNNNNNNNGC 3 cut(s) 719, 1688, 1831
HpySE526I ACGT 1 cut(s) 1269
Hsp92II CATG 6 cut(s) 269, 494, 671, 1103, 1203, 1934
HspAI GCGC 2 cut(s) 502, 549
Ksp22I TGATCA 3 cut(s) 625, 1531, 1933
LguI GCTCTTC 1 cut(s) 1681
LmnI GCTCC 2 cut(s) 526, 687
Lsp1109I GCAGC 4 cut(s) 1090, 1327, 1789, 2407
LweI GCATC 7 cut(s) 304, 745, 851, 1670, 2170, 2324, 2373
MaeI CTAG 4 cut(s) 6, 60, 2279, 2425
MaeII ACGT 1 cut(s) 1269
MaeIII GTNAC 4 cut(s) 1637, 1959, 2190, 2358
MbiI CCGCTC 2 cut(s) 96, 476
MfeI CAATTG 1 cut(s) 1443
MflI RGATCY 6 cut(s) 850, 1180, 1252, 1281, 1369, 2146
MhlI GDGCHC 1 cut(s) 2406
MlyI GAGTC 1 cut(s) 571
MmeI TCCRAC 3 cut(s) 947, 1676, 2135
MroXI GAANNNNTTC 3 cut(s) 804, 941, 2214
MslI CAYNNNNRTG 2 cut(s) 270, 1245
MspA1I CMGCKG 1 cut(s) 848
MspCI CTTAAG 1 cut(s) 1373
MspI CCGG 1 cut(s) 1465
MspR9I CCNGG 1 cut(s) 1904
MunI CAATTG 1 cut(s) 1443
MvaI CCWGG 1 cut(s) 1904
MvnI CGCG 4 cut(s) 502, 504, 562, 1207
MwoI GCNNNNNNNGC 3 cut(s) 719, 1688, 1831
NlaIII CATG 6 cut(s) 269, 494, 671, 1103, 1203, 1934
NlaIV GGNNCC 2 cut(s) 83, 1486
NmuCI GTSAC 3 cut(s) 1637, 2190, 2358
NspI RCATGY 1 cut(s) 494
NspV TTCGAA 1 cut(s) 1276
PaeR7I CTCGAG 1 cut(s) 349
PciI ACATGT 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 1681
PcsI WCGNNNNNNNCGW 1 cut(s) 155
PdmI GAANNNNTTC 3 cut(s) 804, 941, 2214
PfeI GAWTC 9 cut(s) 134, 186, 383, 1588, 1969, 2080, 2117, 2303, 2396
PinAI ACCGGT 1 cut(s) 1464
PkrI GCNGC 6 cut(s) 1105, 1317, 1494, 1779, 1901, 2422
PleI GAGTC 1 cut(s) 571
PpsI GAGTC 1 cut(s) 571
PscI ACATGT 1 cut(s) 490
Psp1406I AACGTT 1 cut(s) 1269
Psp6I CCWGG 1 cut(s) 1902
PspFI CCCAGC 2 cut(s) 1869, 2266
PspGI CCWGG 1 cut(s) 1902
PspN4I GGNNCC 2 cut(s) 83, 1486
PspPI GGNCC 4 cut(s) 11, 337, 743, 920
PstI CTGCAG 1 cut(s) 992
PstNI CAGNNNCTG 1 cut(s) 1295
PsuI RGATCY 6 cut(s) 850, 1180, 1252, 1281, 1369, 2146
RsaI GTAC 1 cut(s) 1111
RsaNI GTAC 1 cut(s) 1110
RseI CAYNNNNRTG 2 cut(s) 270, 1245
SalI GTCGAC 1 cut(s) 1926
SapI GCTCTTC 1 cut(s) 1681
SatI GCNGC 6 cut(s) 1104, 1316, 1493, 1778, 1900, 2421
Sau96I GGNCC 4 cut(s) 11, 337, 743, 920
SchI GAGTC 1 cut(s) 571
ScrFI CCNGG 1 cut(s) 1904
SduI GDGCHC 1 cut(s) 2406
SfaNI GCATC 7 cut(s) 304, 745, 851, 1670, 2170, 2324, 2373
SfcI CTRYAG 2 cut(s) 988, 1615
Sfr274I CTCGAG 1 cut(s) 349
SfuI TTCGAA 1 cut(s) 1276
SgrAI CRCCGGYG 1 cut(s) 1464
SinI GGWCC 2 cut(s) 743, 920
SlaI CTCGAG 1 cut(s) 349
SmiMI CAYNNNNRTG 2 cut(s) 270, 1245
SmlI CTYRAG 3 cut(s) 349, 1373, 2150
SmoI CTYRAG 3 cut(s) 349, 1373, 2150
SsiI CCGC 7 cut(s) 94, 317, 476, 562, 848, 1493, 1900
SspI AATATT 4 cut(s) 209, 791, 1597, 2095
SspMI CTAG 4 cut(s) 6, 60, 2279, 2425
StyD4I CCNGG 1 cut(s) 1902
StyI CCWWGG 1 cut(s) 739
TaaI ACNGT 5 cut(s) 146, 226, 917, 1114, 2373
TaiI ACGT 1 cut(s) 1272
TaqI TCGA 4 cut(s) 350, 1276, 1764, 1927
TatI WGTACW 1 cut(s) 1109
TauI GCSGC 2 cut(s) 1495, 1902
TfiI GAWTC 9 cut(s) 134, 186, 383, 1588, 1969, 2080, 2117, 2303, 2396
TscAI CASTG 3 cut(s) 303, 920, 1578
TseFI GTSAC 3 cut(s) 1637, 2190, 2358
TseI GCWGC 4 cut(s) 1103, 1315, 1777, 2420
Tsp45I GTSAC 3 cut(s) 1637, 2190, 2358
TspDTI ATGAA 6 cut(s) 321, 366, 414, 908, 1176, 1557
TspGWI ACGGA 2 cut(s) 2129, 2208
TspRI CASTG 3 cut(s) 303, 920, 1578
Vha464I CTTAAG 1 cut(s) 1373
VpaK11BI GGWCC 2 cut(s) 743, 920
XapI RAATTY 8 cut(s) 308, 1079, 1164, 1519, 1738, 1848, 1883, 2106
XceI RCATGY 1 cut(s) 494
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XhoI CTCGAG 1 cut(s) 349
XmiI GTMKAC 2 cut(s) 1507, 1927
XmnI GAANNNNTTC 3 cut(s) 804, 941, 2214
XspI CTAG 4 cut(s) 6, 60, 2279, 2425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.