Rw2G050170

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0003612
Physical Location & Seq
Forward (+)
77809016 .. 77811993
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G050170.1

Sequence Viewer

Length: 2394 bp
ATGGCTAGAGGCCCTGTAAGTTCCCTTTTTCGAATTTATGGTTCTAAGAAAAACATATCTAGGTTTAGGGTGTTGATCTGGAATCAATATGACCGCTCTGTATCACCAAAGTTCACATCTTTTCCTGCTTTAGAGGTCCAAAATCGTTCATTTTCAACGAGCTTAGTGGACCCAGTTCGTGTTAGGTTATCTTCAGAGAACCCAAAATTTGTGGGGTGGGATAGTGTTTTTGTTAAGCCATTTTCTACTGGTGTGGAAGATGGGGATGAGGATGTGAGTGATAGTAGAACAGTGGTTGATAATTTTGATGCGGATGTGGGGAAGATTGTTGAGTTTGAGGTTCCGAGTGAGAATAAGGAATATATTTGGTCGGAATCAGATGATGACAGTGAGAATGAGGCTGTTATTAGTGATTCAATGGTGGAAGAGTTGGGAAGTGGTGATGACAATGTGAGTTCAGTGAAAGCGGTGAGCTTTCAGCACGTTGCGTCGCGCGACCCTGTTGAGTTGTATAGGGAGCTTTGTGATAATGAGAATGGTGCAAAGCAGACACGGAGTGATTGGGAGACTCTTCAAGAGACATTCCGGTATTTTGGAAATTCGGGTTGGGCGACTGATCAGGCTCTTGCAATATACATTGGCAGGTCATTTTTTCCCAATGCTGTGTATAAGTTTCGGAGCTTTTTCTTCAAGAAGTGTTCTGCTGATGTTGCCAAGTATGTGGTGTCCCTTGGTCCATCTGATGAAGCAGTTAAGTTTTTGTTTCCTTTGTTTGTTGAATATTGTTTAGAAGAGTTTCCTGATGAGATCAAGCGCTTTCGTGGTATGATTGCATCCGCGGATCTGACGAAGCCCCATACTTGGTTTCCATTTGCACGGGCTATGAAGCGTAAGATAGTTTATCACTGTGGTCCAACCAATAGTGGGAAAACTTTCAATGCCTTGCAACGGTTTATGGAAGCAAAGAAGGGTATCTATTGCAGTCCTCTGAGATTATTGGCTATGGAAGTCTTTGACAAAGTAAATGCGCTTGGGAAATTTGTCCCATTCTCAAACCATGCTGCTTGTACAGTGGAAATGGTGTCAACTGATGAAATGTATGATGTTGCTGTCATTGATGAGATTCAGATGATGGCAGATCCATGTAGAGGTTTTGCATGGACGCGAGCATTACTTGGCTTAAAGGCTGATGAGATACATTTGTGTGGAGATCCAAGCGTTCTCAATGTTGTTCGAAAGATCTGTTCAGAGACTGGTGATGAGTTGTATGAGCAGCATTATGAGAGGTTTAAGCCATTAGTGGTTGAAGCAAAAACGCTATTGGGAGATCTTAAAAATGTTAGGTCTGGAGACTGTGTGGTTGCTTTTTCAAGAAGAGAAGTATTTGAGGTTAAAATTGCAATTGAAAAACACACCAACCACCGCTGCTGTGTTATTTATGGTGCCTTGCCGCCAGAAACTCGTAGACAGCAAGCTAATTTGTTTAATGATCAAGATAATGAATATGATGTTCTGGTTTCTACGGATGCGGTGGGAATGGGTCTGAATCTTAATATTAGGAGGGTTGTATTCTATAGTCTTGCGAAATACAATGGTGACAAAGTTCTCCCAGTTCCAGCATCTCAGGTGAAGCAGATTGCTGGAAGAGCTGGTCGGAGAGGAAGCATCTATCCAGATGGACTTACTACCACATTGAATTTAGATGATCTGGATTACTTGATTGAGTGTCTAAAGCAGCCTTTTGATGAAGTTAAGAAAGTGGGCCTGTTTCCTTTCTACGAGCAGGTTGAGCTATTTGCAGGGCAACTTCCTAACATTACGTTCTGCCAGCTACTTGAAAAATTTGGTGAAAATTGCCGCCTGGATGGGTCATACTTCTTGTGTCGACATGATCATATAAAGAAGGTTGCAAATATGTTACAGAAGATTCAGGCACTATCTCTGGAGGATCGTTTTAACTTCTGTTTTGCCCCAGTAAATATAAGAGACCCAAAAGCTATGTTCCATCTTCTAAAGTTCGCTTCATCATATAGCCAGAATCTCCCTGTCAATATTGCTATGGGCATGCCAACGGGTTCTGCTCGTAATGATAAGGAACTCTTGGATCTCGAGACTAAGCATCAAGTGTTGTCTATGTATATGTGGTTGTCAAACCACTTCAAGGAAGAAACTTTTCCATACGTGAAGAAGGCTGAAGCAATGGCAACAGATATTGCTGAATTGCTGGGTCAGTCTCTAGCCAACGCTAACTGGAAACCAGAATCAAGGCAAGCATCAAAGCCTCAACGGAAGGAAGATAGTCATGAAAGGCCATTGTCACGCATCAAACTGTATCAGAAGAACAGGCATGACCAGTCTGTAAATTCTGTGCACTCAGAGAAGGTAGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

797

Amino Acids

90.59

Weight (kDa)

5.99

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DExH18_N PF23703 189 - 273 2.1e-39 DExH-box ATP-dependent RNA helicase DExH18, N-terminal
DEXQc_Suv3 PF22527 285 - 427 8.8e-58 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 446 - 554 3.8e-15 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 636 - 678 3.1e-17 Suv3 C-terminal domain 1
SUV3_C PF12513 700 - 748 1.9e-11 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 633, 1774
AccB1I GGYRCC 1 cut(s) 1442
AccBSI CCGCTC 1 cut(s) 96
AccI GTMKAC 2 cut(s) 1465, 1885
AccII CGCG 4 cut(s) 493, 495, 839, 1165
AciI CCGC 9 cut(s) 94, 311, 467, 837, 839, 1423, 1451, 1529, 1858
AclWI GGATC 5 cut(s) 849, 1133, 1205, 1956, 2112
AcsI RAATTY 7 cut(s) 33, 206, 598, 1037, 1696, 1841, 2362
AcuI CTGAAG 2 cut(s) 177, 2214
AdeI CACNNNGTG 1 cut(s) 557
AfaI GTAC 1 cut(s) 1069
AfeI AGCGCT 1 cut(s) 815
AfiI CCNNNNNNNGG 5 cut(s) 861, 924, 948, 1148, 2161
AjnI CCWGG 1 cut(s) 1860
AjuI GAANNNNNNNTTGG 2 cut(s) 589, 621
Alw21I GWGCWC 1 cut(s) 2373
Alw26I GTCTC 7 cut(s) 560, 572, 1244, 1344, 1980, 2105, 2238
Alw44I GTGCAC 1 cut(s) 2369
AlwI GGATC 5 cut(s) 849, 1133, 1205, 1956, 2112
AlwNI CAGNNNCTG 1 cut(s) 1253
Ama87I CYCGRG 1 cut(s) 2108
Aor51HI AGCGCT 1 cut(s) 815
AoxI GGCC 3 cut(s) 10, 1762, 2309
ApaLI GTGCAC 1 cut(s) 2369
ApeKI GCWGC 5 cut(s) 1061, 1273, 1425, 1735, 2387
ApoI RAATTY 7 cut(s) 33, 206, 598, 1037, 1696, 1841, 2362
Asp700I GAANNNNTTC 3 cut(s) 795, 932, 2172
AspLEI GCGC 3 cut(s) 495, 816, 1030
AspS9I GGNCC 6 cut(s) 11, 136, 169, 734, 911, 1762
AsuHPI GGTGA 7 cut(s) 96, 452, 481, 1268, 1607, 1639, 1859
AsuII TTCGAA 2 cut(s) 31, 1234
AvaI CYCGRG 1 cut(s) 2108
AvaII GGWCC 4 cut(s) 136, 169, 734, 911
BaeGI GKGCMC 1 cut(s) 2373
BaeI ACNNNNGTAYC 2 cut(s) 1187, 1220
BanI GGYRCC 1 cut(s) 1442
Bbv12I GWGCWC 1 cut(s) 2373
BbvI GCAGC 5 cut(s) 1048, 1285, 1412, 1747, 2374
BccI CCATC 6 cut(s) 254, 745, 1126, 1670, 1859, 2013
BciT130I CCWGG 1 cut(s) 1862
BclI TGATCA 3 cut(s) 616, 1489, 1891
BcoDI GTCTC 7 cut(s) 560, 572, 1244, 1344, 1980, 2105, 2238
BfaI CTAG 3 cut(s) 6, 60, 2237
BfmI CTRYAG 1 cut(s) 1573
BfoI RGCGCY 1 cut(s) 817
BfuAI ACCTGC 2 cut(s) 633, 1774
BglII AGATCT 2 cut(s) 1239, 1327
BisI GCNGC 7 cut(s) 1062, 1274, 1426, 1451, 1736, 1858, 2388
BlsI GCNGC 7 cut(s) 1063, 1275, 1427, 1452, 1737, 1859, 2389
Bme1390I CCNGG 1 cut(s) 1862
Bme18I GGWCC 4 cut(s) 136, 169, 734, 911
BmeT110I CYCGRG 1 cut(s) 2108
BmgT120I GGNCC 6 cut(s) 11, 136, 169, 734, 911, 1762
BmiI GGNNCC 3 cut(s) 171, 342, 1444
BmrFI CCNGG 1 cut(s) 1862
BmrI ACTGGG 3 cut(s) 167, 1604, 1967
BmsI GCATC 8 cut(s) 298, 842, 1516, 1628, 1674, 2128, 2282, 2331
BmuI ACTGGG 3 cut(s) 167, 1604, 1967
BpmI CTGGAG 2 cut(s) 1368, 1964
Bpu14I TTCGAA 2 cut(s) 31, 1234
BsaAI YACGTR 1 cut(s) 2182
BsaI GGTCTC 1 cut(s) 1980
BsaJI CCNNGG 2 cut(s) 730, 837
BsaWI WCCGGW 1 cut(s) 585
BsaXI ACNNNNNCTCC 2 cut(s) 1341, 1371
Bsc4I CCNNNNNNNGG 5 cut(s) 861, 924, 948, 1148, 2161
Bse1I ACTGG 7 cut(s) 173, 253, 1258, 1610, 1973, 2255, 2353
Bse3DI GCAATG 1 cut(s) 2205
BseBI CCWGG 1 cut(s) 1862
BseDI CCNNGG 2 cut(s) 730, 837
BseGI GGATG 6 cut(s) 271, 277, 319, 833, 1531, 1870
BseLI CCNNNNNNNGG 5 cut(s) 861, 924, 948, 1148, 2161
BseMI GCAATG 1 cut(s) 2205
BseMII CTCAG 3 cut(s) 980, 1637, 2388
BseNI ACTGG 7 cut(s) 173, 253, 1258, 1610, 1973, 2255, 2353
BseSI GKGCMC 1 cut(s) 2373
BseXI GCAGC 5 cut(s) 1048, 1285, 1412, 1747, 2374
BseYI CCCAGC 1 cut(s) 2224
Bsh1236I CGCG 4 cut(s) 493, 495, 839, 1165
BshFI GGCC 3 cut(s) 12, 1764, 2311
BshNI GGYRCC 1 cut(s) 1442
BsiHKAI GWGCWC 1 cut(s) 2373
BsiHKCI CYCGRG 1 cut(s) 2108
BsiSI CCGG 1 cut(s) 586
BslFI GGGAC 2 cut(s) 712, 1028
BslI CCNNNNNNNGG 5 cut(s) 861, 924, 948, 1148, 2161
BsmAI GTCTC 7 cut(s) 560, 572, 1244, 1344, 1980, 2105, 2238
BsmFI GGGAC 2 cut(s) 712, 1028
BsnI GGCC 3 cut(s) 12, 1764, 2311
Bso31I GGTCTC 1 cut(s) 1980
BsoBI CYCGRG 1 cut(s) 2108
Bsp119I TTCGAA 2 cut(s) 31, 1234
Bsp1286I GDGCHC 1 cut(s) 2373
Bsp1407I TGTACA 1 cut(s) 1067
BspACI CCGC 9 cut(s) 94, 311, 467, 837, 839, 1423, 1451, 1529, 1858
BspANI GGCC 3 cut(s) 12, 1764, 2311
BspCNI CTCAG 3 cut(s) 981, 1636, 2387
BspFNI CGCG 4 cut(s) 493, 495, 839, 1165
BspHI TCATGA 1 cut(s) 2302
BspLI GGNNCC 3 cut(s) 171, 342, 1444
BspMI ACCTGC 2 cut(s) 633, 1774
BspPI GGATC 5 cut(s) 849, 1133, 1205, 1956, 2112
BspQI GCTCTTC 1 cut(s) 1639
BspT104I TTCGAA 2 cut(s) 31, 1234
BspT107I GGYRCC 1 cut(s) 1442
BspTNI GGTCTC 1 cut(s) 1980
BsrBI CCGCTC 1 cut(s) 96
BsrDI GCAATG 1 cut(s) 2205
BsrGI TGTACA 1 cut(s) 1067
BsrI ACTGG 7 cut(s) 173, 253, 1258, 1610, 1973, 2255, 2353
BssECI CCNNGG 2 cut(s) 730, 837
BssT1I CCWWGG 1 cut(s) 730
Bst2UI CCWGG 1 cut(s) 1862
Bst4CI ACNGT 7 cut(s) 292, 389, 908, 951, 1072, 1355, 2331
Bst6I CTCTTC 5 cut(s) 420, 576, 786, 1369, 1639
BstAUI TGTACA 1 cut(s) 1067
BstBAI YACGTR 1 cut(s) 2182
BstBI TTCGAA 2 cut(s) 31, 1234
BstC8I GCNNGC 5 cut(s) 1167, 1473, 1829, 2066, 2271
BstDEI CTNAG 7 cut(s) 45, 163, 989, 1623, 2115, 2374, 2391
BstDSI CCRYGG 1 cut(s) 837
BstF5I GGATG 6 cut(s) 271, 277, 319, 833, 1531, 1870
BstFNI CGCG 4 cut(s) 493, 495, 839, 1165
BstH2I RGCGCY 1 cut(s) 817
BstHHI GCGC 3 cut(s) 495, 816, 1030
BstMAI GTCTC 7 cut(s) 560, 572, 1244, 1344, 1980, 2105, 2238
BstMWI GCNNNNNNNGC 3 cut(s) 710, 1646, 1789
BstNI CCWGG 1 cut(s) 1862
BstNSI RCATGY 1 cut(s) 2068
BstSCI CCNGG 1 cut(s) 1860
BstSFI CTRYAG 1 cut(s) 1573
BstSLI GKGCMC 1 cut(s) 2373
BstUI CGCG 4 cut(s) 493, 495, 839, 1165
BstV1I GCAGC 5 cut(s) 1048, 1285, 1412, 1747, 2374
BstX2I RGATCY 6 cut(s) 841, 1138, 1210, 1239, 1327, 2104
BstXI CCANNNNNNTGG 1 cut(s) 721
BstYI RGATCY 6 cut(s) 841, 1138, 1210, 1239, 1327, 2104
BsuRI GGCC 3 cut(s) 12, 1764, 2311
BtgI CCRYGG 1 cut(s) 837
BtsCI GGATG 6 cut(s) 271, 277, 319, 833, 1531, 1870
BtsIMutI CAGTG 5 cut(s) 297, 394, 465, 904, 1077
BveI ACCTGC 2 cut(s) 633, 1774
Cac8I GCNNGC 5 cut(s) 1167, 1473, 1829, 2066, 2271
CaiI CAGNNNCTG 1 cut(s) 1253
CciI TCATGA 1 cut(s) 2302
CfoI GCGC 3 cut(s) 495, 816, 1030
Cfr13I GGNCC 6 cut(s) 11, 136, 169, 734, 911, 1762
Cfr42I CCGCGG 1 cut(s) 840
CseI GACGC 2 cut(s) 477, 1171
Csp6I GTAC 1 cut(s) 1068
CspCI CAANNNNNGTGG 2 cut(s) 192, 227
CviAII CATG 7 cut(s) 1058, 1143, 1158, 1889, 2065, 2303, 2348
CviQI GTAC 1 cut(s) 1068
DdeI CTNAG 7 cut(s) 45, 163, 989, 1623, 2115, 2374, 2391
DraIII CACNNNGTG 1 cut(s) 557
Eam1104I CTCTTC 5 cut(s) 420, 576, 786, 1369, 1639
EarI CTCTTC 5 cut(s) 420, 576, 786, 1369, 1639
Eco130I CCWWGG 1 cut(s) 730
Eco31I GGTCTC 1 cut(s) 1980
Eco47I GGWCC 4 cut(s) 136, 169, 734, 911
Eco47III AGCGCT 1 cut(s) 815
Eco57I CTGAAG 2 cut(s) 177, 2214
Eco88I CYCGRG 1 cut(s) 2108
EcoO109I RGGNCCY 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 1860
EcoT14I CCWWGG 1 cut(s) 730
ErhI CCWWGG 1 cut(s) 730
FaeI CATG 7 cut(s) 1061, 1146, 1161, 1892, 2068, 2306, 2351
FalI AAGNNNNNCTT 2 cut(s) 2084, 2116
FaqI GGGAC 2 cut(s) 712, 1028
FatI CATG 7 cut(s) 1057, 1142, 1157, 1888, 2064, 2302, 2347
FbaI TGATCA 3 cut(s) 616, 1489, 1891
FblI GTMKAC 2 cut(s) 1465, 1885
Fnu4HI GCNGC 7 cut(s) 1062, 1274, 1426, 1451, 1736, 1858, 2388
FokI GGATG 6 cut(s) 278, 284, 326, 820, 1538, 1877
Fsp4HI GCNGC 7 cut(s) 1062, 1274, 1426, 1451, 1736, 1858, 2388
FspBI CTAG 3 cut(s) 6, 60, 2237
GlaI GCGC 3 cut(s) 494, 815, 1029
GluI GCNGC 7 cut(s) 1062, 1274, 1426, 1451, 1736, 1858, 2388
GsaI CCCAGC 1 cut(s) 2228
GsuI CTGGAG 2 cut(s) 1368, 1964
HaeII RGCGCY 1 cut(s) 817
HaeIII GGCC 3 cut(s) 12, 1764, 2311
HapII CCGG 1 cut(s) 586
HgaI GACGC 2 cut(s) 477, 1171
HhaI GCGC 3 cut(s) 495, 816, 1030
Hin1II CATG 7 cut(s) 1061, 1146, 1161, 1892, 2068, 2306, 2351
Hin6I GCGC 3 cut(s) 493, 814, 1028
HinP1I GCGC 3 cut(s) 493, 814, 1028
HincII GTYRAC 2 cut(s) 1086, 1886
HindII GTYRAC 2 cut(s) 1086, 1886
HinfI GANTC 9 cut(s) 82, 374, 413, 568, 1123, 1546, 1927, 2038, 2261
HpaII CCGG 1 cut(s) 586
HphI GGTGA 7 cut(s) 96, 452, 481, 1268, 1607, 1639, 1859
Hpy166II GTNNAC 6 cut(s) 114, 169, 1086, 1466, 1886, 2371
Hpy8I GTNNAC 6 cut(s) 114, 169, 1086, 1466, 1886, 2371
Hpy99I CGWCG 1 cut(s) 493
HpyAV CCTTC 5 cut(s) 961, 1897, 2182, 2284, 2374
HpyCH4III ACNGT 7 cut(s) 292, 389, 908, 951, 1072, 1355, 2331
HpyCH4IV ACGT 3 cut(s) 483, 1820, 2181
HpyF10VI GCNNNNNNNGC 3 cut(s) 710, 1646, 1789
HpyF3I CTNAG 7 cut(s) 45, 163, 989, 1623, 2115, 2374, 2391
HpySE526I ACGT 3 cut(s) 483, 1820, 2181
Hsp92II CATG 7 cut(s) 1061, 1146, 1161, 1892, 2068, 2306, 2351
HspAI GCGC 3 cut(s) 493, 814, 1028
Ksp22I TGATCA 3 cut(s) 616, 1489, 1891
KspI CCGCGG 1 cut(s) 840
LguI GCTCTTC 1 cut(s) 1639
LmnI GCTCC 2 cut(s) 517, 678
Lsp1109I GCAGC 5 cut(s) 1048, 1285, 1412, 1747, 2374
LweI GCATC 8 cut(s) 298, 842, 1516, 1628, 1674, 2128, 2282, 2331
MaeI CTAG 3 cut(s) 6, 60, 2237
MaeII ACGT 3 cut(s) 483, 1820, 2181
MaeIII GTNAC 3 cut(s) 1595, 1917, 2316
MbiI CCGCTC 1 cut(s) 96
MfeI CAATTG 1 cut(s) 1401
MflI RGATCY 6 cut(s) 841, 1138, 1210, 1239, 1327, 2104
MhlI GDGCHC 1 cut(s) 2373
MlyI GAGTC 1 cut(s) 562
MmeI TCCRAC 3 cut(s) 351, 938, 1634
MroXI GAANNNNTTC 3 cut(s) 795, 932, 2172
MslI CAYNNNNRTG 1 cut(s) 1203
MspA1I CMGCKG 2 cut(s) 839, 1425
MspI CCGG 1 cut(s) 586
MspR9I CCNGG 1 cut(s) 1862
MunI CAATTG 1 cut(s) 1401
MvaI CCWGG 1 cut(s) 1862
MvnI CGCG 4 cut(s) 493, 495, 839, 1165
MwoI GCNNNNNNNGC 3 cut(s) 710, 1646, 1789
NlaIII CATG 7 cut(s) 1061, 1146, 1161, 1892, 2068, 2306, 2351
NlaIV GGNNCC 3 cut(s) 171, 342, 1444
NmuCI GTSAC 2 cut(s) 1595, 2316
NspI RCATGY 1 cut(s) 2068
NspV TTCGAA 2 cut(s) 31, 1234
PaeI GCATGC 1 cut(s) 2068
PaeR7I CTCGAG 1 cut(s) 2108
PagI TCATGA 1 cut(s) 2302
PciSI GCTCTTC 1 cut(s) 1639
PcsI WCGNNNNNNNCGW 1 cut(s) 608
PdmI GAANNNNTTC 3 cut(s) 795, 932, 2172
PfeI GAWTC 8 cut(s) 82, 374, 413, 1123, 1546, 1927, 2038, 2261
PkrI GCNGC 7 cut(s) 1063, 1275, 1427, 1452, 1737, 1859, 2389
PleI GAGTC 1 cut(s) 562
PpsI GAGTC 1 cut(s) 562
Ppu21I YACGTR 1 cut(s) 2182
Psp6I CCWGG 1 cut(s) 1860
PspFI CCCAGC 1 cut(s) 2224
PspGI CCWGG 1 cut(s) 1860
PspN4I GGNNCC 3 cut(s) 171, 342, 1444
PspPI GGNCC 6 cut(s) 11, 136, 169, 734, 911, 1762
PstNI CAGNNNCTG 1 cut(s) 1253
PsuI RGATCY 6 cut(s) 841, 1138, 1210, 1239, 1327, 2104
RsaI GTAC 1 cut(s) 1069
RsaNI GTAC 1 cut(s) 1068
RseI CAYNNNNRTG 1 cut(s) 1203
SacII CCGCGG 1 cut(s) 840
SalI GTCGAC 1 cut(s) 1884
SapI GCTCTTC 1 cut(s) 1639
SatI GCNGC 7 cut(s) 1062, 1274, 1426, 1451, 1736, 1858, 2388
Sau96I GGNCC 6 cut(s) 11, 136, 169, 734, 911, 1762
SchI GAGTC 1 cut(s) 562
ScrFI CCNGG 1 cut(s) 1862
SduI GDGCHC 1 cut(s) 2373
SfaNI GCATC 8 cut(s) 298, 842, 1516, 1628, 1674, 2128, 2282, 2331
SfcI CTRYAG 1 cut(s) 1573
Sfr274I CTCGAG 1 cut(s) 2108
Sfr303I CCGCGG 1 cut(s) 840
SfuI TTCGAA 2 cut(s) 31, 1234
SgrBI CCGCGG 1 cut(s) 840
SinI GGWCC 4 cut(s) 136, 169, 734, 911
SlaI CTCGAG 1 cut(s) 2108
SmiMI CAYNNNNRTG 1 cut(s) 1203
SmlI CTYRAG 1 cut(s) 2108
SmoI CTYRAG 1 cut(s) 2108
SphI GCATGC 1 cut(s) 2068
SsiI CCGC 9 cut(s) 94, 311, 467, 837, 839, 1423, 1451, 1529, 1858
SspI AATATT 3 cut(s) 782, 1555, 2053
SspMI CTAG 3 cut(s) 6, 60, 2237
StyD4I CCNGG 1 cut(s) 1860
StyI CCWWGG 1 cut(s) 730
TaaI ACNGT 7 cut(s) 292, 389, 908, 951, 1072, 1355, 2331
TaiI ACGT 3 cut(s) 486, 1823, 2184
TaqI TCGA 4 cut(s) 31, 1234, 1885, 2109
TatI WGTACW 1 cut(s) 1067
TauI GCSGC 2 cut(s) 1453, 1860
TfiI GAWTC 8 cut(s) 82, 374, 413, 1123, 1546, 1927, 2038, 2261
TscAI CASTG 5 cut(s) 297, 394, 465, 911, 1077
TseFI GTSAC 2 cut(s) 1595, 2316
TseI GCWGC 5 cut(s) 1061, 1273, 1425, 1735, 2387
Tsp45I GTSAC 2 cut(s) 1595, 2316
TspDTI ATGAA 8 cut(s) 138, 759, 899, 1107, 1515, 1761, 2013, 2319
TspGWI ACGGA 3 cut(s) 568, 1538, 2302
TspRI CASTG 5 cut(s) 297, 394, 465, 911, 1077
VneI GTGCAC 1 cut(s) 2369
VpaK11BI GGWCC 4 cut(s) 136, 169, 734, 911
XapI RAATTY 7 cut(s) 33, 206, 598, 1037, 1696, 1841, 2362
XceI RCATGY 1 cut(s) 2068
XhoI CTCGAG 1 cut(s) 2108
XmiI GTMKAC 2 cut(s) 1465, 1885
XmnI GAANNNNTTC 3 cut(s) 795, 932, 2172
XspI CTAG 3 cut(s) 6, 60, 2237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.