RLG00000021795

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0003612
Physical Location & Seq
Forward (+)
78376739 .. 78379719
2981 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021795

Sequence Viewer

Length: 2430 bp
ATGGCTAGAGGCCCTGTAAGTTCCCTTTTTCGAATTTATGGTTCTAAGAAAAACATATCTAGGTTTAGGGTTTTGATTTGGAATCAATATGACCGCTCTGTATCACCAAAGTTCACATCTTTTCCTGCTTTAGAGGTCCAAAATCGTTCATTTTCAACGAGCTTAGCGGACCCAGTTCGTGTTAGGTTATCTTCAGAGAACCCAAAATTTGTGGGGCGGGATAGTGTTTTTGTTAAGCCATTTTCTACTGGTGTGGAAGATGGGGATGAGGATGTGAGTGATAGTAGAACAGTGGTTGATGATTTTGATGCGGATGTGGGGAAGATTGTTGAGTTTGAGGTTCCGAGTGAGAATAAGGAATATATTTCGTCGGAATCAGATGATGATGATAGTGAGAATGAGGCTGTTATTAGTGATTCAATGGTGGAAGAGTTGAGAAGTGGTGATGACAATGTGAGTTCAGTGAAAGCGGTGAGCTTTCAGCACGTTGCATCGCGCGACCCTGTTGAGTTGTATAGGGAGCTTTGTGATAATGAGAAGGGTGCAAAGCAGACACGGAGTGATTGGGAGACTCTTCAAGAGACGTTCCGGTATTTTGGAAATTCGGGTTGGGCGACTGATCAGGCTCTTGCAATATACGTTGGCAGGTCATTTTTTCCTAATGCTGTGTATAAGTTTCGGAGCTTTTTCTTCAAGAAGTGTTCTGCTGATGTTGCCAAGTATGTGGTGTCCCTTGGTCCATCTGATGATGCAGTTAAGTTTTTGTTTCCTTTGTTTGTTGAATATTGTTTAGAAGAGTTTCCCGATGAGATCAAGCGCTTTCGTGGTATGATTGCGTCCGCGGATCTCACGAAGCCCCATACTTGGTTTCCATTTGCACGGGCTATGAAGCGTAAGATAGTTTATCACTGTGGCCCAACCAATAGTGGGAAAACTTTCAATGCCTTGCAACGGTTTATGGAAGCAAAGAAGGGTATCTATTGCAGTCCTCTGAGATTATTGGCTATGGAAGTCTTTGACAAAGTAAATGCGCTTGGGGTGTATTGTAGTCTTCACACAGGGCAAGAAAAGAAATTTGTCCCATTCTCAAACCATGCTGCTTGTACAGTGGAAATGGTGTCAACCGACGAAATGTATGATGTTGCTGTCATTGATGAGATTCAGATGATAGCAGATCCATGTAGAGGTTTTGCATGGACGCGAGCATTACTTGGCTTAAAGGCTGATGAGATACATTTGTGTGGAGATCCAAGCGTTCTCAATGTTGTTCGAAAGATCTGTTCAGAGACTGGTGATGAGTTGTATGAGCAGCATTATGAGAGGTTTAAGCCATTAGTGGTTGAAGCAAAAACGCTATTGGGAGATCTTAAAAATGTTAGGTCCGGAGACTGTGTGGTTGCTTTTTCAAGAAGAGAGGTATTTGAGGTTAAAATTGCAATTGAAAAACACACCAACCACCGCTGCTGTGTTATTTATGGTGCCTTGCCGCCAGAAACTCGTAGACAGCAAGCAAATTTATTTAATGATCAAGGTAATGAATATGATGTTCTGGTTTCTACTGATGCGGTGGGAATGGGTCTGAATCTTAATATTAGGAGGGTTGTATTCTATAGTCTTGCAAAGTACAATGGTGACAAAGTTCTCCCAGTCCCAGCATCTCAGGTGAAGCAGATTGCTGGAAGAGCTGGTCGGAGAGGAAGTATCTATCCAGATGGACTTACTACCACATTGAATTTAGATGATCTGGAATACTTGATTGAGTGTCTAAAGCAGCCTTTTGATGAAGTTAAGAAAGTGGGCTTGTTTCCTTTCTATGAGCAGGTTGAGCTATTTGCGGGGCAACTTCCTAATATTACGTTCTGCCAGCTACTTGAAAAATTTGGTGAAAATTGCCGCCTGGATGGGTCATACTTCTTGTGTCGACATGATCATATAAAGAAGGTTGCAAATATGTTACAGAAGATTCAGGCACTATCTCTGGAGGATCGTTTTAACTTCTGTTTTGCCCCAGTAAATATAAGAGACCCAAAAGCTATGTTCCATCTTCTAAAGTTCGCTTCATCATATAGCCAGAAGCTCCCTGTCAATATTGCTATGGGCATGCCAACGGGTTCTGCTCGTAATGATAAGGAACTCTTGGATCTCGAGACTAAGCATCAAGTGTTGTCTATGTATATGTGGTTGTCAAACCACTTCAAGGAAGAAACTTTTCCATACGTGAAGAAGGCTGAAGCAATGGCAACAGATATTGCTGAATTGCTGGGTCAGTCTCTAGCCAACGCTAACTGGAAACCAGAATCAAGGCAGGCATCAAAGCCTCAACGGAAGGAAGATAATCATGAAAGGCCATTGTCACGCATCAAACTGTATCAGAAGAACAGGCATGACCAATCTGTAAATTCTGTGCACTCAGAGAAGGTAGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

810

Amino Acids

91.86

Weight (kDa)

6.25

Isoelectric Point (pI)

43.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DExH18_N PF23703 190 - 274 5.3e-39 DExH-box ATP-dependent RNA helicase DExH18, N-terminal
DEXQc_Suv3 PF22527 286 - 439 2.2e-69 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 458 - 566 9.1e-15 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 648 - 690 3.2e-17 Suv3 C-terminal domain 1
SUV3_C PF12513 712 - 760 2e-11 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 636, 1810
AccB1I GGYRCC 1 cut(s) 1478
AccBSI CCGCTC 1 cut(s) 96
AccI GTMKAC 2 cut(s) 1501, 1921
AccII CGCG 4 cut(s) 496, 498, 842, 1201
AccIII TCCGGA 1 cut(s) 1382
AclWI GGATC 5 cut(s) 852, 1169, 1241, 1992, 2148
AcsI RAATTY 8 cut(s) 33, 206, 601, 1073, 1513, 1732, 1877, 2398
AcuI CTGAAG 2 cut(s) 177, 2250
AdeI CACNNNGTG 1 cut(s) 560
AfaI GTAC 2 cut(s) 1105, 1625
AfeI AGCGCT 1 cut(s) 818
AfiI CCNNNNNNNGG 5 cut(s) 864, 927, 951, 1184, 2197
AjnI CCWGG 1 cut(s) 1896
AjuI GAANNNNNNNTTGG 2 cut(s) 592, 624
Alw21I GWGCWC 1 cut(s) 2409
Alw26I GTCTC 7 cut(s) 563, 575, 1280, 1380, 2016, 2141, 2274
Alw44I GTGCAC 1 cut(s) 2405
AlwI GGATC 5 cut(s) 852, 1169, 1241, 1992, 2148
AlwNI CAGNNNCTG 1 cut(s) 1289
Ama87I CYCGRG 1 cut(s) 2144
Aor13HI TCCGGA 1 cut(s) 1382
Aor51HI AGCGCT 1 cut(s) 818
AoxI GGCC 3 cut(s) 10, 913, 2345
ApaLI GTGCAC 1 cut(s) 2405
ApeKI GCWGC 5 cut(s) 1097, 1309, 1461, 1771, 2423
ApoI RAATTY 8 cut(s) 33, 206, 601, 1073, 1513, 1732, 1877, 2398
Asp700I GAANNNNTTC 3 cut(s) 798, 935, 2208
AspLEI GCGC 3 cut(s) 498, 819, 1033
AspS9I GGNCC 6 cut(s) 11, 136, 169, 737, 914, 1380
AsuHPI GGTGA 7 cut(s) 96, 455, 484, 1304, 1643, 1675, 1895
AsuII TTCGAA 2 cut(s) 31, 1270
AvaI CYCGRG 1 cut(s) 2144
AvaII GGWCC 4 cut(s) 136, 169, 737, 1380
BaeGI GKGCMC 1 cut(s) 2409
BaeI ACNNNNGTAYC 2 cut(s) 1223, 1256
BanI GGYRCC 1 cut(s) 1478
BbsI GAAGAC 1 cut(s) 1043
Bbv12I GWGCWC 1 cut(s) 2409
BbvI GCAGC 5 cut(s) 1084, 1321, 1448, 1783, 2410
BccI CCATC 5 cut(s) 254, 748, 1706, 1895, 2049
BciT130I CCWGG 1 cut(s) 1898
BclI TGATCA 3 cut(s) 619, 1525, 1927
BcoDI GTCTC 7 cut(s) 563, 575, 1280, 1380, 2016, 2141, 2274
BfaI CTAG 3 cut(s) 6, 60, 2273
BfmI CTRYAG 1 cut(s) 1609
BfoI RGCGCY 1 cut(s) 820
BfuAI ACCTGC 2 cut(s) 636, 1810
BglII AGATCT 2 cut(s) 1275, 1363
BisI GCNGC 7 cut(s) 1098, 1310, 1462, 1487, 1772, 1894, 2424
BlpI GCTNAGC 1 cut(s) 163
BlsI GCNGC 7 cut(s) 1099, 1311, 1463, 1488, 1773, 1895, 2425
Bme1390I CCNGG 1 cut(s) 1898
Bme18I GGWCC 4 cut(s) 136, 169, 737, 1380
BmeT110I CYCGRG 1 cut(s) 2144
BmgT120I GGNCC 6 cut(s) 11, 136, 169, 737, 914, 1380
BmiI GGNNCC 3 cut(s) 171, 342, 1480
BmrFI CCNGG 1 cut(s) 1898
BmrI ACTGGG 3 cut(s) 167, 1640, 2003
BmsI GCATC 8 cut(s) 298, 500, 739, 1552, 1664, 2164, 2318, 2367
BmuI ACTGGG 3 cut(s) 167, 1640, 2003
BpiI GAAGAC 1 cut(s) 1043
BpmI CTGGAG 1 cut(s) 2000
Bpu1102I GCTNAGC 1 cut(s) 163
Bpu14I TTCGAA 2 cut(s) 31, 1270
BsaAI YACGTR 1 cut(s) 2218
BsaI GGTCTC 1 cut(s) 2016
BsaJI CCNNGG 2 cut(s) 733, 840
BsaWI WCCGGW 2 cut(s) 588, 1382
BsaXI ACNNNNNCTCC 4 cut(s) 1377, 1407, 1684, 1714
Bsc4I CCNNNNNNNGG 5 cut(s) 864, 927, 951, 1184, 2197
Bse1I ACTGG 6 cut(s) 173, 253, 1294, 1646, 2009, 2291
Bse3DI GCAATG 1 cut(s) 2241
BseAI TCCGGA 1 cut(s) 1382
BseBI CCWGG 1 cut(s) 1898
BseDI CCNNGG 2 cut(s) 733, 840
BseGI GGATG 4 cut(s) 271, 277, 319, 1906
BseLI CCNNNNNNNGG 5 cut(s) 864, 927, 951, 1184, 2197
BseMI GCAATG 1 cut(s) 2241
BseMII CTCAG 3 cut(s) 983, 1673, 2424
BseNI ACTGG 6 cut(s) 173, 253, 1294, 1646, 2009, 2291
BseSI GKGCMC 1 cut(s) 2409
BseXI GCAGC 5 cut(s) 1084, 1321, 1448, 1783, 2410
BseYI CCCAGC 2 cut(s) 1651, 2260
Bsh1236I CGCG 4 cut(s) 496, 498, 842, 1201
BshFI GGCC 3 cut(s) 12, 915, 2347
BshNI GGYRCC 1 cut(s) 1478
BsiHKAI GWGCWC 1 cut(s) 2409
BsiHKCI CYCGRG 1 cut(s) 2144
BsiSI CCGG 2 cut(s) 589, 1383
BslFI GGGAC 3 cut(s) 715, 1064, 1634
BslI CCNNNNNNNGG 5 cut(s) 864, 927, 951, 1184, 2197
BsmAI GTCTC 7 cut(s) 563, 575, 1280, 1380, 2016, 2141, 2274
BsmBI CGTCTC 1 cut(s) 575
BsmFI GGGAC 3 cut(s) 715, 1064, 1634
BsnI GGCC 3 cut(s) 12, 915, 2347
Bso31I GGTCTC 1 cut(s) 2016
BsoBI CYCGRG 1 cut(s) 2144
Bsp119I TTCGAA 2 cut(s) 31, 1270
Bsp1286I GDGCHC 1 cut(s) 2409
Bsp13I TCCGGA 1 cut(s) 1382
Bsp1407I TGTACA 1 cut(s) 1103
Bsp1720I GCTNAGC 1 cut(s) 163
BspANI GGCC 3 cut(s) 12, 915, 2347
BspCNI CTCAG 3 cut(s) 984, 1672, 2423
BspEI TCCGGA 1 cut(s) 1382
BspFNI CGCG 4 cut(s) 496, 498, 842, 1201
BspHI TCATGA 1 cut(s) 2338
BspLI GGNNCC 3 cut(s) 171, 342, 1480
BspMI ACCTGC 2 cut(s) 636, 1810
BspPI GGATC 5 cut(s) 852, 1169, 1241, 1992, 2148
BspQI GCTCTTC 1 cut(s) 1675
BspT104I TTCGAA 2 cut(s) 31, 1270
BspT107I GGYRCC 1 cut(s) 1478
BspTNI GGTCTC 1 cut(s) 2016
BsrBI CCGCTC 1 cut(s) 96
BsrDI GCAATG 1 cut(s) 2241
BsrGI TGTACA 1 cut(s) 1103
BsrI ACTGG 6 cut(s) 173, 253, 1294, 1646, 2009, 2291
BssECI CCNNGG 2 cut(s) 733, 840
BssT1I CCWWGG 1 cut(s) 733
Bst2UI CCWGG 1 cut(s) 1898
Bst4CI ACNGT 6 cut(s) 292, 911, 954, 1108, 1391, 2367
Bst6I CTCTTC 5 cut(s) 423, 579, 789, 1405, 1675
BstAUI TGTACA 1 cut(s) 1103
BstBAI YACGTR 1 cut(s) 2218
BstBI TTCGAA 2 cut(s) 31, 1270
BstC8I GCNNGC 5 cut(s) 1203, 1509, 1865, 2102, 2307
BstDEI CTNAG 7 cut(s) 45, 163, 992, 1659, 2151, 2410, 2427
BstDSI CCRYGG 1 cut(s) 840
BstF5I GGATG 4 cut(s) 271, 277, 319, 1906
BstFNI CGCG 4 cut(s) 496, 498, 842, 1201
BstH2I RGCGCY 1 cut(s) 820
BstHHI GCGC 3 cut(s) 498, 819, 1033
BstMAI GTCTC 7 cut(s) 563, 575, 1280, 1380, 2016, 2141, 2274
BstMWI GCNNNNNNNGC 3 cut(s) 713, 1682, 1825
BstNI CCWGG 1 cut(s) 1898
BstNSI RCATGY 1 cut(s) 2104
BstSCI CCNGG 1 cut(s) 1896
BstSFI CTRYAG 1 cut(s) 1609
BstSLI GKGCMC 1 cut(s) 2409
BstUI CGCG 4 cut(s) 496, 498, 842, 1201
BstV1I GCAGC 5 cut(s) 1084, 1321, 1448, 1783, 2410
BstV2I GAAGAC 1 cut(s) 1043
BstX2I RGATCY 6 cut(s) 844, 1174, 1246, 1275, 1363, 2140
BstXI CCANNNNNNTGG 1 cut(s) 724
BstYI RGATCY 6 cut(s) 844, 1174, 1246, 1275, 1363, 2140
BsuRI GGCC 3 cut(s) 12, 915, 2347
BtgI CCRYGG 1 cut(s) 840
BtgZI GCGATG 1 cut(s) 477
BtsCI GGATG 4 cut(s) 271, 277, 319, 1906
BtsIMutI CAGTG 4 cut(s) 297, 468, 907, 1113
BveI ACCTGC 2 cut(s) 636, 1810
Cac8I GCNNGC 5 cut(s) 1203, 1509, 1865, 2102, 2307
CaiI CAGNNNCTG 1 cut(s) 1289
CciI TCATGA 1 cut(s) 2338
CfoI GCGC 3 cut(s) 498, 819, 1033
Cfr13I GGNCC 6 cut(s) 11, 136, 169, 737, 914, 1380
Cfr42I CCGCGG 1 cut(s) 843
CseI GACGC 2 cut(s) 825, 1207
Csp6I GTAC 2 cut(s) 1104, 1624
CspCI CAANNNNNGTGG 2 cut(s) 192, 227
CviAII CATG 7 cut(s) 1094, 1179, 1194, 1925, 2101, 2339, 2384
CviQI GTAC 2 cut(s) 1104, 1624
DdeI CTNAG 7 cut(s) 45, 163, 992, 1659, 2151, 2410, 2427
DraIII CACNNNGTG 1 cut(s) 560
Eam1104I CTCTTC 5 cut(s) 423, 579, 789, 1405, 1675
EarI CTCTTC 5 cut(s) 423, 579, 789, 1405, 1675
Eco130I CCWWGG 1 cut(s) 733
Eco31I GGTCTC 1 cut(s) 2016
Eco47I GGWCC 4 cut(s) 136, 169, 737, 1380
Eco47III AGCGCT 1 cut(s) 818
Eco57I CTGAAG 2 cut(s) 177, 2250
Eco88I CYCGRG 1 cut(s) 2144
EcoO109I RGGNCCY 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 1896
EcoT14I CCWWGG 1 cut(s) 733
ErhI CCWWGG 1 cut(s) 733
Esp3I CGTCTC 1 cut(s) 575
FaeI CATG 7 cut(s) 1097, 1182, 1197, 1928, 2104, 2342, 2387
FalI AAGNNNNNCTT 2 cut(s) 2120, 2152
FaqI GGGAC 3 cut(s) 715, 1064, 1634
FatI CATG 7 cut(s) 1093, 1178, 1193, 1924, 2100, 2338, 2383
FauI CCCGC 2 cut(s) 210, 1828
FbaI TGATCA 3 cut(s) 619, 1525, 1927
FblI GTMKAC 2 cut(s) 1501, 1921
Fnu4HI GCNGC 7 cut(s) 1098, 1310, 1462, 1487, 1772, 1894, 2424
FokI GGATG 4 cut(s) 278, 284, 326, 1913
Fsp4HI GCNGC 7 cut(s) 1098, 1310, 1462, 1487, 1772, 1894, 2424
FspBI CTAG 3 cut(s) 6, 60, 2273
GlaI GCGC 3 cut(s) 497, 818, 1032
GluI GCNGC 7 cut(s) 1098, 1310, 1462, 1487, 1772, 1894, 2424
GsaI CCCAGC 2 cut(s) 1655, 2264
GsuI CTGGAG 1 cut(s) 2000
HaeII RGCGCY 1 cut(s) 820
HaeIII GGCC 3 cut(s) 12, 915, 2347
HapII CCGG 2 cut(s) 589, 1383
HgaI GACGC 2 cut(s) 825, 1207
HhaI GCGC 3 cut(s) 498, 819, 1033
Hin1II CATG 7 cut(s) 1097, 1182, 1197, 1928, 2104, 2342, 2387
Hin6I GCGC 3 cut(s) 496, 817, 1031
HinP1I GCGC 3 cut(s) 496, 817, 1031
HincII GTYRAC 2 cut(s) 1122, 1922
HindII GTYRAC 2 cut(s) 1122, 1922
HinfI GANTC 8 cut(s) 82, 374, 416, 571, 1159, 1582, 1963, 2297
HpaII CCGG 2 cut(s) 589, 1383
HphI GGTGA 7 cut(s) 96, 455, 484, 1304, 1643, 1675, 1895
Hpy166II GTNNAC 5 cut(s) 114, 1122, 1502, 1922, 2407
Hpy8I GTNNAC 5 cut(s) 114, 1122, 1502, 1922, 2407
Hpy99I CGWCG 2 cut(s) 373, 1130
HpyAV CCTTC 6 cut(s) 532, 964, 1933, 2218, 2320, 2410
HpyCH4III ACNGT 6 cut(s) 292, 911, 954, 1108, 1391, 2367
HpyCH4IV ACGT 5 cut(s) 486, 584, 639, 1856, 2217
HpyF10VI GCNNNNNNNGC 3 cut(s) 713, 1682, 1825
HpyF3I CTNAG 7 cut(s) 45, 163, 992, 1659, 2151, 2410, 2427
HpySE526I ACGT 5 cut(s) 486, 584, 639, 1856, 2217
Hsp92II CATG 7 cut(s) 1097, 1182, 1197, 1928, 2104, 2342, 2387
HspAI GCGC 3 cut(s) 496, 817, 1031
Kpn2I TCCGGA 1 cut(s) 1382
Ksp22I TGATCA 3 cut(s) 619, 1525, 1927
KspI CCGCGG 1 cut(s) 843
LguI GCTCTTC 1 cut(s) 1675
LmnI GCTCC 3 cut(s) 520, 681, 2082
Lsp1109I GCAGC 5 cut(s) 1084, 1321, 1448, 1783, 2410
LweI GCATC 8 cut(s) 298, 500, 739, 1552, 1664, 2164, 2318, 2367
MaeI CTAG 3 cut(s) 6, 60, 2273
MaeII ACGT 5 cut(s) 486, 584, 639, 1856, 2217
MaeIII GTNAC 3 cut(s) 1631, 1953, 2352
MbiI CCGCTC 1 cut(s) 96
MfeI CAATTG 1 cut(s) 1437
MflI RGATCY 6 cut(s) 844, 1174, 1246, 1275, 1363, 2140
MhlI GDGCHC 1 cut(s) 2409
MlyI GAGTC 1 cut(s) 565
MmeI TCCRAC 2 cut(s) 351, 1670
MroI TCCGGA 1 cut(s) 1382
MroXI GAANNNNTTC 3 cut(s) 798, 935, 2208
MslI CAYNNNNRTG 1 cut(s) 1239
MspA1I CMGCKG 2 cut(s) 842, 1461
MspI CCGG 2 cut(s) 589, 1383
MspR9I CCNGG 1 cut(s) 1898
MunI CAATTG 1 cut(s) 1437
MvaI CCWGG 1 cut(s) 1898
MvnI CGCG 4 cut(s) 496, 498, 842, 1201
MwoI GCNNNNNNNGC 3 cut(s) 713, 1682, 1825
NlaIII CATG 7 cut(s) 1097, 1182, 1197, 1928, 2104, 2342, 2387
NlaIV GGNNCC 3 cut(s) 171, 342, 1480
NmuCI GTSAC 2 cut(s) 1631, 2352
NspI RCATGY 1 cut(s) 2104
NspV TTCGAA 2 cut(s) 31, 1270
PaeI GCATGC 1 cut(s) 2104
PaeR7I CTCGAG 1 cut(s) 2144
PagI TCATGA 1 cut(s) 2338
PciSI GCTCTTC 1 cut(s) 1675
PcsI WCGNNNNNNNCGW 1 cut(s) 611
PdmI GAANNNNTTC 3 cut(s) 798, 935, 2208
PfeI GAWTC 7 cut(s) 82, 374, 416, 1159, 1582, 1963, 2297
PkrI GCNGC 7 cut(s) 1099, 1311, 1463, 1488, 1773, 1895, 2425
PleI GAGTC 1 cut(s) 565
PpsI GAGTC 1 cut(s) 565
Ppu21I YACGTR 1 cut(s) 2218
Psp6I CCWGG 1 cut(s) 1896
PspFI CCCAGC 2 cut(s) 1651, 2260
PspGI CCWGG 1 cut(s) 1896
PspN4I GGNNCC 3 cut(s) 171, 342, 1480
PspPI GGNCC 6 cut(s) 11, 136, 169, 737, 914, 1380
PstNI CAGNNNCTG 1 cut(s) 1289
PsuI RGATCY 6 cut(s) 844, 1174, 1246, 1275, 1363, 2140
RsaI GTAC 2 cut(s) 1105, 1625
RsaNI GTAC 2 cut(s) 1104, 1624
RseI CAYNNNNRTG 1 cut(s) 1239
SacII CCGCGG 1 cut(s) 843
SalI GTCGAC 1 cut(s) 1920
SapI GCTCTTC 1 cut(s) 1675
SatI GCNGC 7 cut(s) 1098, 1310, 1462, 1487, 1772, 1894, 2424
Sau96I GGNCC 6 cut(s) 11, 136, 169, 737, 914, 1380
SchI GAGTC 1 cut(s) 565
ScrFI CCNGG 1 cut(s) 1898
SduI GDGCHC 1 cut(s) 2409
SfaNI GCATC 8 cut(s) 298, 500, 739, 1552, 1664, 2164, 2318, 2367
SfcI CTRYAG 1 cut(s) 1609
Sfr274I CTCGAG 1 cut(s) 2144
Sfr303I CCGCGG 1 cut(s) 843
SfuI TTCGAA 2 cut(s) 31, 1270
SgrBI CCGCGG 1 cut(s) 843
SinI GGWCC 4 cut(s) 136, 169, 737, 1380
SlaI CTCGAG 1 cut(s) 2144
SmiMI CAYNNNNRTG 1 cut(s) 1239
SmlI CTYRAG 1 cut(s) 2144
SmoI CTYRAG 1 cut(s) 2144
SphI GCATGC 1 cut(s) 2104
SspI AATATT 4 cut(s) 785, 1591, 1852, 2089
SspMI CTAG 3 cut(s) 6, 60, 2273
StyD4I CCNGG 1 cut(s) 1896
StyI CCWWGG 1 cut(s) 733
TaaI ACNGT 6 cut(s) 292, 911, 954, 1108, 1391, 2367
TaiI ACGT 5 cut(s) 489, 587, 642, 1859, 2220
TaqI TCGA 4 cut(s) 31, 1270, 1921, 2145
TatI WGTACW 2 cut(s) 1103, 1623
TauI GCSGC 2 cut(s) 1489, 1896
TfiI GAWTC 7 cut(s) 82, 374, 416, 1159, 1582, 1963, 2297
TscAI CASTG 4 cut(s) 297, 468, 914, 1113
TseFI GTSAC 2 cut(s) 1631, 2352
TseI GCWGC 5 cut(s) 1097, 1309, 1461, 1771, 2423
Tsp45I GTSAC 2 cut(s) 1631, 2352
TspDTI ATGAA 6 cut(s) 138, 902, 1551, 1797, 2049, 2355
TspGWI ACGGA 2 cut(s) 571, 2338
TspRI CASTG 4 cut(s) 297, 468, 914, 1113
VneI GTGCAC 1 cut(s) 2405
VpaK11BI GGWCC 4 cut(s) 136, 169, 737, 1380
XapI RAATTY 8 cut(s) 33, 206, 601, 1073, 1513, 1732, 1877, 2398
XceI RCATGY 1 cut(s) 2104
XhoI CTCGAG 1 cut(s) 2144
XmiI GTMKAC 2 cut(s) 1501, 1921
XmnI GAANNNNTTC 3 cut(s) 798, 935, 2208
XspI CTAG 3 cut(s) 6, 60, 2273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.