Prupe.3G268500_v2.0.a1

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0003612
Physical Location & Seq
Forward (+)
25060532 .. 25064183
3652 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G268500.1

Sequence Viewer

Length: 2472 bp
ATGGCTAGAGGCCCTGCAAGCTCTCTCTTTCGACTTTATGCTTCGAAGAAAAGCATATCTAGGTTTAGGGTTCTGGTGTGGAATCAATATCTCAGTTCCGCAGGTTCATATGACCGCTCTGTATCGCCAAGTTTCCCTTTTTGTCCCGCTTTCGATGGTCCAAACCGTCGGTTTTCGACGAGCTTAAGGGACCTAGTTCGTCTTAGATTGCCGCCCCAAAGCCCAAAATTTATGGGCAGCGATACCCTTGATGCAAAACCATTTTCAACTGCTTTGGGAGATGGGGACGAAGATGTGAATGATAATAGTGCTTATAGTTCAACAATGGTTGAGTCTGAATGCGATTTTGATGCGGATGCTGGGAAAAATGTTGAGTTTGAGCTTGAGGATAGTGCTCGCAATTTGTCGAATTGTGAAGACAGGGACGGTGATGATGAGGGTCTTATTTGTGATTCAATGATGGTTGAGTCGGAAAATGGTGATGACAATGTGAGTTCAGTGAAACCTTTGAGCTTTGTGCATGTTGCATCCCGCGAGTCTGCTGAATTGTATCGTGAGCTTCGCAATGCCGAAAAGGGTGCGAAGCAGAGACGGTCTGATTGGGACACTCTTCAAGAAATATTCCGGTACTTTGGGAATTCGGGCTGGGCATCCGATCAGTCTCTTGCGATATACATAGGCAGGTCATTTTTTCCTACTGCTGTGCACAATTTTCGGAACTTTTTCTTCAAGAAGTGTTCGGCTGATGTTGCCAGGTATGTGGTGTCCCTTGGTCCATCTGATGATGCAGTTGAGTTTTTGTTTCCAGTGTTTGTTGAATATTGTTTGGAAGAGTTTCCTGATGAGATCAAGCGTTTTCGGGGTATGATTGAATCAGCAGATCTCACTAAGCCCCATACATGGTTTCCATTTGCTCGGGCTATGAAGCGTAAGATAGTTTATCACTGTGGTCCAACCAATAGTGGCAAAACTTACAATGCTTTGCAAAGTTTCATGGAAGCAAAGAAGGGTATTTACTGCAGTCCTCTGAGATTATTGGCTATGGAAGTCTTTGACAAAGTAAATGGAAATGGGGTTTATTGTAGTCTTCACACGGGACAAGAAAAGAAGTTTGTCCCATTCTCAAACCATGTTGCTTGTACGGTGGAAATGGTGTCAACCGATGAACTGTACGATGTTGCTGTTATCGATGAAATTCAGATGATGGCAGACCCATATAGAGGGTTTGCATGGACACGAGCATTGCTTGGGCTGAAGGCTGACGAGATACATTTGTGTGGAGATCCAAGTGTTCTGGACATTGTTCGAAAAATCAGTTCAGAGACTGGTGATGAGTTGTACGTGCACCATTATGAGAGGTTTAAGCCGTTGGTGGTTGAAGCCAAAACGCTCTTGGGAGATCTTAAAAATGTTCGGTCTGGAGACTGTGTGGTTGCTTTTTCAAGGAGAGAGGTATTTGAGGTTAAAATTGCAATTGAAAAACACACCAATCACCGTTGTTGTGTTATTTATGGTGCCTTGCCACCAGAAACTCGAAGACAGCAAGCAAATTTGTTTAATGATCAAAATAATGAATATGATGTGCTTGTTGCTACCGATGCAGTGGGAATGGGTTTAAATCTTAATATCAGGAGGGTTGTATTCTATGGCCTGGCCAAGTACAATGGTGACAAAACTGTAGCAGTTCCTGCATCTCAAGTGAAGCAGATTGCTGGAAGAGCTGGTCGGAGAGGAAGTATATATCCAGATGGACTCACTACCACACTGAACTTAGATGATCTGGCTTACTTGATTGAATGTCTAAAGCAACCTTTTGATGAAGTTAAGAAAGTGGGCCTCTTTCCTTTCTTTGAGCAGGTCGAGCTATTTGCAGGCAAAATGCCAAATGTTACATTCTGCCAGCTTCTTGAGAAATTCAGTGAAAATTGTCGTTTGGATGGGTCATACTTCTTGTGTCGACATGATCATATAAAGAAGGTTGCAAATATGTTACAGAAGGTCCCAGAATTATCTCTAGAGGATCGTTTTAACTTCTGTTTTGCCCCGGTTAATATCAGAGACCCAAAAGCGATGTACCATCTTCTAAGGTTTGCTTCATCATATAGTCAGAATCTCCCAGTTAATATTGCTATGGGCATACCAAAGGGGTCTGCTCGTAACAATAAGGAGCTCTTGGATCTCGAGACCAAGCATCAAGTGTTGTCTATGTATATGTGGCTATCCCACCACTTCAAGGAGGAAACTTTTCCATATTGGAAGAAGGCTGAGGCAATGGCAACAGATATTGCGGAACTGTTGGGTAAGTCTCTAGCCAATGCTAACTGGAAACCAGAATCAAGGGCGGCAGAGAACCAAAAGTTTCAACAAAAACGAGATAGTTATGACAGGCCAAGATCGCTCATCAAAGTATATGAGAAGAAAAGGCAAGACCGGTCTGTACAACATGAGCTCTCAGAGAAAGTAGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

824

Amino Acids

93.5

Weight (kDa)

6.36

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 92, 672, 1846
AccB1I GGYRCC 1 cut(s) 1514
AccBSI CCGCTC 1 cut(s) 117
AccI GTMKAC 1 cut(s) 1957
AccII CGCG 1 cut(s) 534
AciI CCGC 8 cut(s) 99, 115, 147, 212, 353, 532, 2288, 2342
AclWI GGATC 3 cut(s) 1277, 2028, 2184
AcoI YGGCCR 1 cut(s) 1653
AcsI RAATTY 5 cut(s) 227, 637, 1194, 1549, 1913
AcuI CTGAAG 1 cut(s) 1274
AfaI GTAC 7 cut(s) 629, 1141, 1172, 1340, 1661, 2075, 2439
AfiI CCNNNNNNNGG 3 cut(s) 900, 1220, 2233
AflII CTTAAG 1 cut(s) 184
AgeI ACCGGT 1 cut(s) 2430
AjnI CCWGG 2 cut(s) 752, 1650
Alw21I GWGCWC 5 cut(s) 397, 708, 1347, 2172, 2451
Alw26I GTCTC 7 cut(s) 583, 666, 1316, 1416, 2052, 2177, 2310
Alw44I GTGCAC 2 cut(s) 704, 1343
AlwI GGATC 3 cut(s) 1277, 2028, 2184
AlwNI CAGNNNCTG 2 cut(s) 1325, 1688
Ama87I CYCGRG 2 cut(s) 915, 2180
AoxI GGCC 5 cut(s) 10, 1648, 1653, 1834, 2387
ApaLI GTGCAC 2 cut(s) 704, 1343
ApeKI GCWGC 2 cut(s) 237, 2465
ApoI RAATTY 5 cut(s) 227, 637, 1194, 1549, 1913
AsiGI ACCGGT 1 cut(s) 2430
Asp700I GAANNNNTTC 3 cut(s) 722, 834, 2244
AspS9I GGNCC 7 cut(s) 11, 158, 190, 773, 950, 1834, 1999
AsuC2I CCSGG 1 cut(s) 2045
AsuHPI GGTGA 5 cut(s) 440, 491, 1340, 1484, 1679
AsuII TTCGAA 2 cut(s) 44, 1306
AvaI CYCGRG 2 cut(s) 915, 2180
AvaII GGWCC 5 cut(s) 158, 190, 773, 950, 1999
BaeGI GKGCMC 2 cut(s) 708, 1347
BaeI ACNNNNGTAYC 2 cut(s) 1259, 1292
BalI TGGCCA 1 cut(s) 1655
BanI GGYRCC 1 cut(s) 1514
BanII GRGCYC 2 cut(s) 2172, 2451
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BauI CACGAG 1 cut(s) 1236
BbsI GAAGAC 3 cut(s) 423, 1079, 1543
Bbv12I GWGCWC 5 cut(s) 397, 708, 1347, 2172, 2451
BbvCI CCTCAGC 1 cut(s) 2265
BbvI GCAGC 2 cut(s) 249, 2452
BccI CCATC 8 cut(s) 149, 275, 454, 784, 1198, 1742, 1931, 2085
BceAI ACGGC 1 cut(s) 1351
BcgI CGANNNNNNTGC 8 cut(s) 332, 366, 560, 594, 695, 729, 1850, 1884
BciT130I CCWGG 2 cut(s) 754, 1652
BclI TGATCA 2 cut(s) 1561, 1963
BcnI CCSGG 1 cut(s) 2045
BcoDI GTCTC 7 cut(s) 583, 666, 1316, 1416, 2052, 2177, 2310
BfaI CTAG 5 cut(s) 6, 60, 194, 2015, 2309
BfmI CTRYAG 2 cut(s) 1018, 1677
BfrI CTTAAG 1 cut(s) 184
BfuAI ACCTGC 3 cut(s) 92, 672, 1846
BglII AGATCT 2 cut(s) 880, 1399
BisI GCNGC 4 cut(s) 212, 238, 2343, 2466
BlsI GCNGC 4 cut(s) 213, 239, 2344, 2467
Bme1390I CCNGG 3 cut(s) 754, 1652, 2045
Bme18I GGWCC 5 cut(s) 158, 190, 773, 950, 1999
BmeT110I CYCGRG 2 cut(s) 915, 2180
BmgT120I GGNCC 7 cut(s) 11, 158, 190, 773, 950, 1834, 1999
BmiI GGNNCC 3 cut(s) 191, 1516, 2001
BmrFI CCNGG 3 cut(s) 754, 1652, 2045
BmrI ACTGGG 1 cut(s) 2111
BmsI GCATC 9 cut(s) 241, 340, 346, 536, 659, 775, 1588, 1700, 2200
BmuI ACTGGG 1 cut(s) 2111
BpiI GAAGAC 3 cut(s) 423, 1079, 1543
BpmI CTGGAG 1 cut(s) 1440
Bpu10I CCTNAGC 1 cut(s) 2265
Bpu14I TTCGAA 2 cut(s) 44, 1306
BpuEI CTTGAG 3 cut(s) 404, 1680, 1928
BpuMI CCSGG 1 cut(s) 2045
Bsa29I ATCGAT 1 cut(s) 1188
BsaAI YACGTR 1 cut(s) 1342
BsaI GGTCTC 2 cut(s) 2052, 2177
BsaJI CCNNGG 2 cut(s) 769, 2043
BsaWI WCCGGW 2 cut(s) 624, 2430
BsaXI ACNNNNNCTCC 4 cut(s) 1413, 1443, 1720, 1750
Bsc4I CCNNNNNNNGG 3 cut(s) 900, 1220, 2233
Bse118I RCCGGY 1 cut(s) 2430
Bse1I ACTGG 4 cut(s) 806, 1330, 2117, 2327
Bse3DI GCAATG 3 cut(s) 571, 1241, 2277
BseBI CCWGG 2 cut(s) 754, 1652
BseCI ATCGAT 1 cut(s) 1188
BseDI CCNNGG 2 cut(s) 769, 2043
BseGI GGATG 4 cut(s) 361, 527, 650, 1942
BseLI CCNNNNNNNGG 3 cut(s) 900, 1220, 2233
BseMI GCAATG 3 cut(s) 571, 1241, 2277
BseMII CTCAG 4 cut(s) 106, 1019, 2256, 2466
BseNI ACTGG 4 cut(s) 806, 1330, 2117, 2327
BseSI GKGCMC 2 cut(s) 708, 1347
BseXI GCAGC 2 cut(s) 249, 2452
BseYI CCCAGC 2 cut(s) 359, 645
Bsh1236I CGCG 1 cut(s) 534
BshFI GGCC 5 cut(s) 12, 1650, 1655, 1836, 2389
BshNI GGYRCC 1 cut(s) 1514
BshTI ACCGGT 1 cut(s) 2430
BshVI ATCGAT 1 cut(s) 1188
BsiHKAI GWGCWC 5 cut(s) 397, 708, 1347, 2172, 2451
BsiHKCI CYCGRG 2 cut(s) 915, 2180
BsiSI CCGG 3 cut(s) 625, 2045, 2431
BslFI GGGAC 9 cut(s) 129, 203, 299, 437, 617, 751, 1100, 1110, 1985
BslI CCNNNNNNNGG 3 cut(s) 900, 1220, 2233
BsmAI GTCTC 7 cut(s) 583, 666, 1316, 1416, 2052, 2177, 2310
BsmBI CGTCTC 1 cut(s) 583
BsmFI GGGAC 9 cut(s) 129, 203, 299, 437, 617, 751, 1100, 1110, 1985
BsmI GAATGC 1 cut(s) 344
BsnI GGCC 5 cut(s) 12, 1650, 1655, 1836, 2389
Bso31I GGTCTC 2 cut(s) 2052, 2177
BsoBI CYCGRG 2 cut(s) 915, 2180
Bsp119I TTCGAA 2 cut(s) 44, 1306
Bsp1286I GDGCHC 5 cut(s) 397, 708, 1347, 2172, 2451
Bsp1407I TGTACA 1 cut(s) 2437
BspACI CCGC 8 cut(s) 99, 115, 147, 212, 353, 532, 2288, 2342
BspANI GGCC 5 cut(s) 12, 1650, 1655, 1836, 2389
BspCNI CTCAG 4 cut(s) 105, 1020, 2257, 2465
BspDI ATCGAT 1 cut(s) 1188
BspFNI CGCG 1 cut(s) 534
BspLI GGNNCC 3 cut(s) 191, 1516, 2001
BspMAI CTGCAG 1 cut(s) 1022
BspMI ACCTGC 3 cut(s) 92, 672, 1846
BspPI GGATC 3 cut(s) 1277, 2028, 2184
BspQI GCTCTTC 1 cut(s) 1711
BspT104I TTCGAA 2 cut(s) 44, 1306
BspT107I GGYRCC 1 cut(s) 1514
BspTI CTTAAG 1 cut(s) 184
BspTNI GGTCTC 2 cut(s) 2052, 2177
BsrBI CCGCTC 1 cut(s) 117
BsrDI GCAATG 3 cut(s) 571, 1241, 2277
BsrFI RCCGGY 1 cut(s) 2430
BsrGI TGTACA 1 cut(s) 2437
BsrI ACTGG 4 cut(s) 806, 1330, 2117, 2327
BssAI RCCGGY 1 cut(s) 2430
BssECI CCNNGG 2 cut(s) 769, 2043
BssSI CACGAG 1 cut(s) 1236
BssT1I CCWWGG 1 cut(s) 769
Bst2BI CACGAG 1 cut(s) 1236
Bst2UI CCWGG 2 cut(s) 754, 1652
Bst6I CTCTTC 3 cut(s) 615, 825, 1711
BstAFI CTTAAG 1 cut(s) 184
BstAPI GCANNNNNTGC 1 cut(s) 1688
BstAUI TGTACA 1 cut(s) 2437
BstBAI YACGTR 1 cut(s) 1342
BstBI TTCGAA 2 cut(s) 44, 1306
BstC8I GCNNGC 5 cut(s) 19, 397, 1545, 1873, 1901
BstDEI CTNAG 9 cut(s) 92, 203, 888, 1028, 1771, 2084, 2265, 2452, 2469
BstF5I GGATG 4 cut(s) 361, 527, 650, 1942
BstFNI CGCG 1 cut(s) 534
BstMAI GTCTC 7 cut(s) 583, 666, 1316, 1416, 2052, 2177, 2310
BstMWI GCNNNNNNNGC 7 cut(s) 18, 749, 1598, 1688, 1718, 1861, 2395
BstNI CCWGG 2 cut(s) 754, 1652
BstNSI RCATGY 1 cut(s) 524
BstSCI CCNGG 3 cut(s) 752, 1650, 2043
BstSFI CTRYAG 2 cut(s) 1018, 1677
BstSLI GKGCMC 2 cut(s) 708, 1347
BstUI CGCG 1 cut(s) 534
BstV1I GCAGC 2 cut(s) 249, 2452
BstV2I GAAGAC 3 cut(s) 423, 1079, 1543
BstX2I RGATCY 4 cut(s) 880, 1282, 1399, 2176
BstXI CCANNNNNNTGG 1 cut(s) 760
BstYI RGATCY 4 cut(s) 880, 1282, 1399, 2176
Bsu15I ATCGAT 1 cut(s) 1188
BsuRI GGCC 5 cut(s) 12, 1650, 1655, 1836, 2389
BsuTUI ATCGAT 1 cut(s) 1188
BtgZI GCGATG 1 cut(s) 2084
BtsCI GGATG 4 cut(s) 361, 527, 650, 1942
BtsI GCAGTG 1 cut(s) 1608
BtsIMutI CAGTG 6 cut(s) 504, 813, 943, 1608, 1763, 1924
BveI ACCTGC 3 cut(s) 92, 672, 1846
Cac8I GCNNGC 5 cut(s) 19, 397, 1545, 1873, 1901
CaiI CAGNNNCTG 2 cut(s) 1325, 1688
Cfr10I RCCGGY 1 cut(s) 2430
Cfr13I GGNCC 7 cut(s) 11, 158, 190, 773, 950, 1834, 1999
ClaI ATCGAT 1 cut(s) 1188
Csp6I GTAC 7 cut(s) 628, 1140, 1171, 1339, 1660, 2074, 2438
CspAI ACCGGT 1 cut(s) 2430
CviAII CATG 7 cut(s) 521, 900, 994, 1130, 1230, 1961, 2444
CviQI GTAC 7 cut(s) 628, 1140, 1171, 1339, 1660, 2074, 2438
DdeI CTNAG 9 cut(s) 92, 203, 888, 1028, 1771, 2084, 2265, 2452, 2469
DraI TTTAAA 1 cut(s) 1617
EaeI YGGCCR 1 cut(s) 1653
Eam1104I CTCTTC 3 cut(s) 615, 825, 1711
EarI CTCTTC 3 cut(s) 615, 825, 1711
Ecl136II GAGCTC 2 cut(s) 2170, 2449
Eco130I CCWWGG 1 cut(s) 769
Eco24I GRGCYC 2 cut(s) 2172, 2451
Eco31I GGTCTC 2 cut(s) 2052, 2177
Eco47I GGWCC 5 cut(s) 158, 190, 773, 950, 1999
Eco53kI GAGCTC 2 cut(s) 2170, 2449
Eco57I CTGAAG 1 cut(s) 1274
Eco88I CYCGRG 2 cut(s) 915, 2180
EcoICRI GAGCTC 2 cut(s) 2170, 2449
EcoO109I RGGNCCY 3 cut(s) 11, 190, 1999
EcoRI GAATTC 1 cut(s) 637
EcoRII CCWGG 2 cut(s) 752, 1650
EcoT14I CCWWGG 1 cut(s) 769
EcoT38I GRGCYC 2 cut(s) 2172, 2451
ErhI CCWWGG 1 cut(s) 769
Esp3I CGTCTC 1 cut(s) 583
FaeI CATG 7 cut(s) 524, 903, 997, 1133, 1233, 1964, 2447
FalI AAGNNNNNCTT 6 cut(s) 121, 153, 2077, 2109, 2156, 2188
FaqI GGGAC 9 cut(s) 129, 203, 299, 437, 617, 751, 1100, 1110, 1985
FatI CATG 7 cut(s) 520, 899, 993, 1129, 1229, 1960, 2443
FauI CCCGC 2 cut(s) 154, 539
FauNDI CATATG 1 cut(s) 109
FbaI TGATCA 2 cut(s) 1561, 1963
FblI GTMKAC 1 cut(s) 1957
Fnu4HI GCNGC 4 cut(s) 212, 238, 2343, 2466
FokI GGATG 4 cut(s) 368, 514, 637, 1949
FriOI GRGCYC 2 cut(s) 2172, 2451
Fsp4HI GCNGC 4 cut(s) 212, 238, 2343, 2466
FspBI CTAG 5 cut(s) 6, 60, 194, 2015, 2309
GluI GCNGC 4 cut(s) 212, 238, 2343, 2466
GsaI CCCAGC 2 cut(s) 363, 649
GsuI CTGGAG 1 cut(s) 1440
HaeIII GGCC 5 cut(s) 12, 1650, 1655, 1836, 2389
HapII CCGG 3 cut(s) 625, 2045, 2431
Hin1II CATG 7 cut(s) 524, 903, 997, 1133, 1233, 1964, 2447
HincII GTYRAC 2 cut(s) 1158, 1958
HindII GTYRAC 2 cut(s) 1158, 1958
HinfI GANTC 9 cut(s) 82, 332, 452, 467, 536, 872, 1752, 2110, 2333
HpaII CCGG 3 cut(s) 625, 2045, 2431
HphI GGTGA 5 cut(s) 440, 491, 1340, 1484, 1679
Hpy166II GTNNAC 4 cut(s) 706, 1158, 1345, 1958
Hpy8I GTNNAC 4 cut(s) 706, 1158, 1345, 1958
Hpy99I CGWCG 2 cut(s) 171, 181
HpyAV CCTTC 5 cut(s) 1000, 1249, 1969, 1990, 2254
HpyCH4IV ACGT 1 cut(s) 1341
HpyF10VI GCNNNNNNNGC 7 cut(s) 18, 749, 1598, 1688, 1718, 1861, 2395
HpyF3I CTNAG 9 cut(s) 92, 203, 888, 1028, 1771, 2084, 2265, 2452, 2469
HpySE526I ACGT 1 cut(s) 1341
Hsp92II CATG 7 cut(s) 524, 903, 997, 1133, 1233, 1964, 2447
Ksp22I TGATCA 2 cut(s) 1561, 1963
LguI GCTCTTC 1 cut(s) 1711
LmnI GCTCC 1 cut(s) 2167
Lsp1109I GCAGC 2 cut(s) 249, 2452
LweI GCATC 9 cut(s) 241, 340, 346, 536, 659, 775, 1588, 1700, 2200
MaeI CTAG 5 cut(s) 6, 60, 194, 2015, 2309
MaeII ACGT 1 cut(s) 1341
MaeIII GTNAC 4 cut(s) 1667, 1888, 1989, 2156
MbiI CCGCTC 1 cut(s) 117
MfeI CAATTG 1 cut(s) 1473
MflI RGATCY 4 cut(s) 880, 1282, 1399, 2176
MhlI GDGCHC 5 cut(s) 397, 708, 1347, 2172, 2451
MlsI TGGCCA 1 cut(s) 1655
MluNI TGGCCA 1 cut(s) 1655
MlyI GAGTC 4 cut(s) 341, 476, 545, 1746
MmeI TCCRAC 3 cut(s) 450, 977, 1706
Mox20I TGGCCA 1 cut(s) 1655
MroXI GAANNNNTTC 3 cut(s) 722, 834, 2244
MscI TGGCCA 1 cut(s) 1655
MslI CAYNNNNRTG 2 cut(s) 1275, 1350
Msp20I TGGCCA 1 cut(s) 1655
MspCI CTTAAG 1 cut(s) 184
MspI CCGG 3 cut(s) 625, 2045, 2431
MspR9I CCNGG 3 cut(s) 754, 1652, 2045
MunI CAATTG 1 cut(s) 1473
Mva1269I GAATGC 1 cut(s) 344
MvaI CCWGG 2 cut(s) 754, 1652
MvnI CGCG 1 cut(s) 534
MwoI GCNNNNNNNGC 7 cut(s) 18, 749, 1598, 1688, 1718, 1861, 2395
NciI CCSGG 1 cut(s) 2045
NdeI CATATG 1 cut(s) 109
NlaIII CATG 7 cut(s) 524, 903, 997, 1133, 1233, 1964, 2447
NlaIV GGNNCC 3 cut(s) 191, 1516, 2001
NmuCI GTSAC 1 cut(s) 1667
NspI RCATGY 1 cut(s) 524
NspV TTCGAA 2 cut(s) 44, 1306
PaeR7I CTCGAG 1 cut(s) 2180
PciSI GCTCTTC 1 cut(s) 1711
PctI GAATGC 1 cut(s) 344
PdmI GAANNNNTTC 3 cut(s) 722, 834, 2244
PfeI GAWTC 5 cut(s) 82, 452, 872, 2110, 2333
PinAI ACCGGT 1 cut(s) 2430
PkrI GCNGC 4 cut(s) 213, 239, 2344, 2467
PleI GAGTC 4 cut(s) 340, 475, 544, 1746
PpsI GAGTC 4 cut(s) 340, 475, 544, 1746
Ppu21I YACGTR 1 cut(s) 1342
PpuMI RGGWCCY 2 cut(s) 190, 1999
Psp124BI GAGCTC 2 cut(s) 2172, 2451
Psp5II RGGWCCY 2 cut(s) 190, 1999
Psp6I CCWGG 2 cut(s) 752, 1650
PspFI CCCAGC 2 cut(s) 359, 645
PspGI CCWGG 2 cut(s) 752, 1650
PspN4I GGNNCC 3 cut(s) 191, 1516, 2001
PspPI GGNCC 7 cut(s) 11, 158, 190, 773, 950, 1834, 1999
PspPPI RGGWCCY 2 cut(s) 190, 1999
PstI CTGCAG 1 cut(s) 1022
PstNI CAGNNNCTG 2 cut(s) 1325, 1688
PsuI RGATCY 4 cut(s) 880, 1282, 1399, 2176
RsaI GTAC 7 cut(s) 629, 1141, 1172, 1340, 1661, 2075, 2439
RsaNI GTAC 7 cut(s) 628, 1140, 1171, 1339, 1660, 2074, 2438
RseI CAYNNNNRTG 2 cut(s) 1275, 1350
SacI GAGCTC 2 cut(s) 2172, 2451
SalI GTCGAC 1 cut(s) 1956
SapI GCTCTTC 1 cut(s) 1711
SatI GCNGC 4 cut(s) 212, 238, 2343, 2466
Sau96I GGNCC 7 cut(s) 11, 158, 190, 773, 950, 1834, 1999
SchI GAGTC 4 cut(s) 341, 476, 545, 1746
ScrFI CCNGG 3 cut(s) 754, 1652, 2045
SduI GDGCHC 5 cut(s) 397, 708, 1347, 2172, 2451
SfaNI GCATC 9 cut(s) 241, 340, 346, 536, 659, 775, 1588, 1700, 2200
SfcI CTRYAG 2 cut(s) 1018, 1677
Sfr274I CTCGAG 1 cut(s) 2180
SfuI TTCGAA 2 cut(s) 44, 1306
SinI GGWCC 5 cut(s) 158, 190, 773, 950, 1999
SlaI CTCGAG 1 cut(s) 2180
SmiMI CAYNNNNRTG 2 cut(s) 1275, 1350
SmlI CTYRAG 5 cut(s) 184, 383, 1695, 1907, 2180
SmoI CTYRAG 5 cut(s) 184, 383, 1695, 1907, 2180
SsiI CCGC 8 cut(s) 99, 115, 147, 212, 353, 532, 2288, 2342
SspI AATATT 3 cut(s) 621, 821, 2125
SspMI CTAG 5 cut(s) 6, 60, 194, 2015, 2309
SstI GAGCTC 2 cut(s) 2172, 2451
StyD4I CCNGG 3 cut(s) 752, 1650, 2043
StyI CCWWGG 1 cut(s) 769
TaiI ACGT 1 cut(s) 1344
TaqII GACCGA 1 cut(s) 1404
TatI WGTACW 2 cut(s) 1659, 2437
TauI GCSGC 2 cut(s) 214, 2345
TfiI GAWTC 5 cut(s) 82, 452, 872, 2110, 2333
TscAI CASTG 6 cut(s) 504, 813, 950, 1608, 1770, 1924
TseFI GTSAC 1 cut(s) 1667
TseI GCWGC 2 cut(s) 237, 2465
Tsp45I GTSAC 1 cut(s) 1667
TspDTI ATGAA 8 cut(s) 96, 938, 982, 1179, 1206, 1587, 1833, 2085
TspRI CASTG 6 cut(s) 504, 813, 950, 1608, 1770, 1924
Vha464I CTTAAG 1 cut(s) 184
VneI GTGCAC 2 cut(s) 704, 1343
VpaK11BI GGWCC 5 cut(s) 158, 190, 773, 950, 1999
XapI RAATTY 5 cut(s) 227, 637, 1194, 1549, 1913
XbaI TCTAGA 1 cut(s) 2014
XceI RCATGY 1 cut(s) 524
XcmI CCANNNNNNNNNTGG 1 cut(s) 1390
XhoI CTCGAG 1 cut(s) 2180
XmiI GTMKAC 1 cut(s) 1957
XmnI GAANNNNTTC 3 cut(s) 722, 834, 2244
XspI CTAG 5 cut(s) 6, 60, 194, 2015, 2309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.