No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15370 |
| fragaria_vesca | FvH4_6g29940 |
| malus_domestica | MD17G1208900.v1.1 |
| prunus_persica | Prupe.3G084300_v2.0.a1 Prupe.3G084300_v2.0.a1 |
| pyrus_communis | pycom17g21470 |
| rosa_chinensis | RchiOBHm_Chr2g0135941 |
| rosa_multiflora | Rmu_ssc0000343.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00108760 |
| rosa_rugosa | Rorug02G0326900 |
| rosa_samantha | Rh2AG378800 Rh2BG385200 Rh2CG364300 Rh2DG401500 |
| rosa_wichuraiana | Rw2G030850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 339, 437 |
| AcuI | CTGAAG | 2 cut(s) | 51, 93 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 322 |
| AgsI | TTSAA | 2 cut(s) | 50, 58 |
| AjnI | CCWGG | 1 cut(s) | 378 |
| AluBI | AGCT | 2 cut(s) | 116, 278 |
| AluI | AGCT | 2 cut(s) | 116, 278 |
| AoxI | GGCC | 1 cut(s) | 425 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 2 cut(s) | 339, 437 |
| AspLEI | GCGC | 1 cut(s) | 315 |
| AsuHPI | GGTGA | 1 cut(s) | 268 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BceAI | ACGGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 1 cut(s) | 380 |
| BciVI | GTATCC | 1 cut(s) | 368 |
| BfaI | CTAG | 2 cut(s) | 110, 242 |
| BfoI | RGCGCY | 1 cut(s) | 316 |
| BfuI | GTATCC | 1 cut(s) | 368 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| Bme1390I | CCNGG | 1 cut(s) | 380 |
| BmrFI | CCNGG | 1 cut(s) | 380 |
| BmsI | GCATC | 1 cut(s) | 216 |
| BpmI | CTGGAG | 1 cut(s) | 401 |
| Bpu10I | CCTNAGC | 1 cut(s) | 422 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 322 |
| BseBI | CCWGG | 1 cut(s) | 380 |
| BseGI | GGATG | 4 cut(s) | 39, 205, 361, 417 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 322 |
| BseMII | CTCAG | 2 cut(s) | 108, 300 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| BshFI | GGCC | 1 cut(s) | 427 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 322 |
| BsnI | GGCC | 1 cut(s) | 427 |
| Bsp143I | GATC | 2 cut(s) | 92, 258 |
| BspANI | GGCC | 1 cut(s) | 427 |
| BspCNI | CTCAG | 2 cut(s) | 109, 301 |
| BssMI | GATC | 2 cut(s) | 92, 258 |
| Bst2UI | CCWGG | 1 cut(s) | 380 |
| Bst4CI | ACNGT | 2 cut(s) | 54, 190 |
| BstC8I | GCNNGC | 1 cut(s) | 160 |
| BstDEI | CTNAG | 5 cut(s) | 100, 117, 125, 309, 422 |
| BstF5I | GGATG | 4 cut(s) | 39, 205, 361, 417 |
| BstH2I | RGCGCY | 1 cut(s) | 316 |
| BstHHI | GCGC | 1 cut(s) | 315 |
| BstKTI | GATC | 2 cut(s) | 95, 261 |
| BstMBI | GATC | 2 cut(s) | 92, 258 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 88 |
| BstNI | CCWGG | 1 cut(s) | 380 |
| BstSCI | CCNGG | 1 cut(s) | 378 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BsuI | GTATCC | 1 cut(s) | 368 |
| BsuRI | GGCC | 1 cut(s) | 427 |
| BtsCI | GGATG | 4 cut(s) | 39, 205, 361, 417 |
| BtsI | GCAGTG | 1 cut(s) | 18 |
| BtsIMutI | CAGTG | 3 cut(s) | 18, 186, 306 |
| Cac8I | GCNNGC | 1 cut(s) | 160 |
| CfoI | GCGC | 1 cut(s) | 315 |
| CviJI | RGCY | 7 cut(s) | 82, 116, 245, 278, 301, 421, 427 |
| CviKI_1 | RGCY | 7 cut(s) | 82, 116, 245, 278, 301, 421, 427 |
| DdeI | CTNAG | 5 cut(s) | 100, 117, 125, 309, 422 |
| DpnI | GATC | 2 cut(s) | 94, 260 |
| DpnII | GATC | 2 cut(s) | 92, 258 |
| Eco147I | AGGCCT | 1 cut(s) | 427 |
| Eco57I | CTGAAG | 2 cut(s) | 51, 93 |
| EcoRII | CCWGG | 1 cut(s) | 378 |
| FaiI | YATR | 3 cut(s) | 213, 234, 333 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 135, 167 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| FokI | GGATG | 4 cut(s) | 26, 212, 368, 424 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| FspBI | CTAG | 2 cut(s) | 110, 242 |
| GlaI | GCGC | 1 cut(s) | 314 |
| GluI | GCNGC | 1 cut(s) | 83 |
| GsuI | CTGGAG | 1 cut(s) | 401 |
| HaeII | RGCGCY | 1 cut(s) | 316 |
| HaeIII | GGCC | 1 cut(s) | 427 |
| HhaI | GCGC | 1 cut(s) | 315 |
| Hin6I | GCGC | 1 cut(s) | 313 |
| HinP1I | GCGC | 1 cut(s) | 313 |
| HinfI | GANTC | 2 cut(s) | 121, 402 |
| HphI | GGTGA | 1 cut(s) | 268 |
| Hpy166II | GTNNAC | 2 cut(s) | 175, 184 |
| Hpy188I | TCNGA | 2 cut(s) | 31, 253 |
| Hpy188III | TCNNGA | 4 cut(s) | 295, 323, 353, 406 |
| Hpy8I | GTNNAC | 2 cut(s) | 175, 184 |
| HpyAV | CCTTC | 3 cut(s) | 26, 277, 364 |
| HpyCH4III | ACNGT | 2 cut(s) | 54, 190 |
| HpyCH4IV | ACGT | 1 cut(s) | 288 |
| HpyCH4V | TGCA | 1 cut(s) | 85 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 5 cut(s) | 100, 117, 125, 309, 422 |
| HpySE526I | ACGT | 1 cut(s) | 288 |
| HspAI | GCGC | 1 cut(s) | 313 |
| Kzo9I | GATC | 2 cut(s) | 92, 258 |
| LmnI | GCTCC | 1 cut(s) | 113 |
| LpnPI | CCDG | 6 cut(s) | 81, 172, 308, 338, 365, 392 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| LweI | GCATC | 1 cut(s) | 216 |
| MaeI | CTAG | 2 cut(s) | 110, 242 |
| MaeII | ACGT | 1 cut(s) | 288 |
| MalI | GATC | 2 cut(s) | 94, 260 |
| MboI | GATC | 2 cut(s) | 92, 258 |
| MboII | GAAGA | 3 cut(s) | 86, 148, 155 |
| MluCI | AATT | 3 cut(s) | 339, 360, 437 |
| MnlI | CCTC | 5 cut(s) | 122, 247, 312, 402, 438 |
| MspA1I | CMGCKG | 1 cut(s) | 278 |
| MspR9I | CCNGG | 1 cut(s) | 380 |
| MvaI | CCWGG | 1 cut(s) | 380 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 88 |
| NdeII | GATC | 2 cut(s) | 92, 258 |
| PceI | AGGCCT | 1 cut(s) | 427 |
| PfeI | GAWTC | 2 cut(s) | 121, 402 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| Psp6I | CCWGG | 1 cut(s) | 378 |
| PspGI | CCWGG | 1 cut(s) | 378 |
| PvuII | CAGCTG | 1 cut(s) | 278 |
| SatI | GCNGC | 1 cut(s) | 83 |
| Sau3AI | GATC | 2 cut(s) | 92, 258 |
| ScrFI | CCNGG | 1 cut(s) | 380 |
| SetI | ASST | 6 cut(s) | 118, 133, 258, 280, 291, 381 |
| SfaNI | GCATC | 1 cut(s) | 216 |
| Sse9I | AATT | 3 cut(s) | 339, 360, 437 |
| SseBI | AGGCCT | 1 cut(s) | 427 |
| SspMI | CTAG | 2 cut(s) | 110, 242 |
| StuI | AGGCCT | 1 cut(s) | 427 |
| StyD4I | CCNGG | 1 cut(s) | 378 |
| TaaI | ACNGT | 2 cut(s) | 54, 190 |
| TaiI | ACGT | 1 cut(s) | 291 |
| TasI | AATT | 3 cut(s) | 339, 360, 437 |
| TfiI | GAWTC | 2 cut(s) | 121, 402 |
| TscAI | CASTG | 3 cut(s) | 18, 193, 313 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 3 cut(s) | 156, 252, 372 |
| TspRI | CASTG | 3 cut(s) | 18, 193, 313 |
| XapI | RAATTY | 2 cut(s) | 339, 437 |
| XspI | CTAG | 2 cut(s) | 110, 242 |