Rorug02G0326900

ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
40079357 .. 40084073
4717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0326900.1

Sequence Viewer

Length: 2112 bp
ATGCAAAACCAAAACACTTTATTGCTGCGTACTCTAAACCACCACAGACGTCTCCTGCACTGCACACAATCCCAATCCCAACTCTTTCACAGACCAATTAGACCAAGCACATGCATATCGCTGATAAAGCAATGCAACACCCTTCAGTCCCTCAAAGCTGTCCATGCCTCTATCCTCAGAACCTACCTTCACTTCAATATCTTCTTTTGCACCAACCTCATTGCCCACTATGCCTCTTTGGGCTCAACCTCTCACGCCTATACCCTCTTCTCTGCCTTCTCTTCCTCTGACGTTTTTCTTTGGAATGTAATGATCAAAGGCTTTGTTGACAATGGCCTGTACAACAGAGCCATTGCTTTGTATAGTCAAATGTGGGAATTGGGTGTTCACCCTGATCACTTTACATTCCCTTTTGTTCTTAAGGCTTGTGGTTATGTTTGTGATCATAAGGTTGGTGTAAAGGTTCATGGAGATGTGATTCAATGTGGTTATGCGGCAGATTTGTTTGTAGGTAATTCACTCATTGCACTTTACGGTAAACTGGGGCAGATCGAGGCTGCAAGAAAGGTGTTTGATAAAATTCCTAACCGTACTGTGATTTCCTGGAGTTCAATGATTGGTGCGTATGCACAAAATGGGTATTTTGAGGAAGGATTATTTTTGTTTGTGATGATGTTGAATGACAGATTGATACCCAACAGGGCTGCAATTTTGAATGTGATGGCTTGTGTTTTAAGAAGCAAGGAGGCTGATGAGGTTCGTGCAGTTTTGATAGATAATGGACTTCAGTGTGATAGATCTGTTCAAAATGCTGCAATGCAGATGTATGCACGCTGCGGAAGAATTGATGTTGCTCGAGGTTTCTTTGATGGAATCATTGATAAAGACTTGGTGAGTTGGGCATCCATGATTGAAGCATATGCGCAAGTTAATTTGCCTCTTGAAGCCTTGGAGCTCTTTAAAAGTATGATGGTGCAAAGGATTCGCCCTGATTTGGTGGCACTTTTGAGTGTGATTCGCACTTGTTCAAATCTAGCATCATATAAGCAAGCACGCTGGATTCACGGAGTTGTTATTCGTTCCTTTTTTGGGCACCATGTCACGCTTGAAACTTCTCTAGTTGATCTATATGTAAAATGTGGAAGTTTGGTATATGCTAGAAAAGTTTTTGATAAGATGCAAGAAAGAAATATAATATCGTGGAGCACCATGATTTCAGGATATGGGATGCATGGTCATGGAAGAGAAGCAGTCAACCTCTTTCATCAGATGAAGGCTCTAACAAAACCAGACCACGTTGCATTTCTATCAGTGTTGTCGGCATGCAGTCATGGTGGTTTGATTGCCGAAGGATGGGACTGCTTCAATTCTATGGGTAGGGATTTTCACATCACACCAAGACCCGAACATTATGCATGTATGGTTGATCTGTTGGGTCGATCTGGTCGACTGAATGAAGCCTTTGAGTTTATTGAGAGAATGCCAGTAAGGCCAGATGCTGGTGTTTGGGGAGCACTTCTCGGGGCATGTAGAATTCATTCAAACATAGAACTGGCAAAAACTGCTGCAAAGAATTTATTTGAATTGGATGCGGAGAACCCAGGTCGATATGTCCTCATGTCCAATATTTATGCATCTTCTGGTAAACAGAAGGATGCTGATAAAATTAGAGATTTAATGAAACAAAGAGGAGTGAGGAAGGTTGCTGGTCATACTAGTATAGAGATTAGAAACAAGGTCTACACATTTGTGGCTGGAGACAAGTCACATGCTCAATCTGATTTAATCTATTCAGAGTTGGAGAAAGTTATAAACAGGATTCGGCAAGAAGGTTACAGGCCAGATTTGAACTTTGTATTGCACGATGTGGAGGAAGAGATGAAGGAAACAATGTTGTATGTGCATAGTGAGAAGCTTGCAATAGTTTTTGGACTTTTAAATTCAGGACCAGGAAGTGTTATTAGAATTAATAAGAATCTTAGAGTCTGTGGGGATTGTCATACAGCTTCCAAGTTTATCTCTAAGGTTATGGGAAGGGAAATTGTAATGAGAGATGCTCATAGATTCCACCATTTCAATAATGGTGCATGCTCTTGTGGGGATTATTGGTGA

Protein Analysis

703

Amino Acids

79.37

Weight (kDa)

8.9

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 143 7.7e-10 PPR repeat family
PPR_2 PF13041 396 - 443 5.3e-07 PPR repeat family
PPR PF01535 399 - 425 1.1e-06 PPR repeat
E_motif PF20431 513 - 575 8.1e-20 E motif
Eplus_motif PF20430 580 - 607 1.2e-07 E+ motif
DYW_deaminase PF14432 611 - 703 6.4e-44 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1811
AatII GACGTC 1 cut(s) 52
Acc16I TGCGCA 1 cut(s) 924
AccB1I GGYRCC 1 cut(s) 1092
AccB7I CCANNNNNTGG 1 cut(s) 1499
AccI GTMKAC 2 cut(s) 1447, 1740
AciI CCGC 3 cut(s) 494, 837, 1592
AcsI RAATTY 4 cut(s) 579, 1533, 1573, 1939
AcuI CTGAAG 2 cut(s) 128, 770
AcyI GRCGYC 1 cut(s) 49
AdeI CACNNNGTG 1 cut(s) 1867
AfaI GTAC 3 cut(s) 31, 341, 592
AfiI CCNNNNNNNGG 4 cut(s) 994, 1089, 1353, 1499
AflII CTTAAG 1 cut(s) 419
AhlI ACTAGT 1 cut(s) 1715
AjnI CCWGG 3 cut(s) 602, 1600, 1948
AleI CACNNNNGTG 1 cut(s) 1748
AluBI AGCT 4 cut(s) 158, 955, 1915, 2006
AluI AGCT 4 cut(s) 158, 955, 1915, 2006
Alw21I GWGCWC 3 cut(s) 957, 1208, 1516
Alw26I GTCTC 2 cut(s) 56, 1752
AlwNI CAGNNNCTG 1 cut(s) 1499
Ama87I CYCGRG 2 cut(s) 855, 1520
AoxI GGCC 3 cut(s) 334, 1490, 1838
ApeKI GCWGC 6 cut(s) 25, 557, 704, 812, 834, 1565
ApoI RAATTY 4 cut(s) 579, 1533, 1573, 1939
AseI ATTAAT 1 cut(s) 1968
Asp700I GAANNNNTTC 1 cut(s) 1537
AspLEI GCGC 1 cut(s) 925
AspS9I GGNCC 1 cut(s) 1946
AsuHPI GGTGA 2 cut(s) 380, 904
AvaI CYCGRG 2 cut(s) 855, 1520
AvaII GGWCC 1 cut(s) 1946
BaeGI GKGCMC 1 cut(s) 1095
BanI GGYRCC 1 cut(s) 1092
BanII GRGCYC 2 cut(s) 245, 957
Bbv12I GWGCWC 3 cut(s) 957, 1208, 1516
BbvI GCAGC 6 cut(s) 12, 544, 691, 799, 821, 1552
BccI CCATC 4 cut(s) 715, 863, 964, 1347
BcgI CGANNNNNNTGC 4 cut(s) 965, 999, 1394, 1428
BciT130I CCWGG 3 cut(s) 604, 1602, 1950
BclI TGATCA 3 cut(s) 312, 394, 442
BcoDI GTCTC 2 cut(s) 56, 1752
BcuI ACTAGT 1 cut(s) 1715
BfaI CTAG 4 cut(s) 1034, 1118, 1158, 1716
BfrI CTTAAG 1 cut(s) 419
BglI GCCNNNNNGGC 1 cut(s) 1489
BglII AGATCT 1 cut(s) 797
BisI GCNGC 7 cut(s) 26, 495, 558, 705, 813, 835, 1566
BlsI GCNGC 7 cut(s) 27, 496, 559, 706, 814, 836, 1567
Bme1390I CCNGG 3 cut(s) 604, 1602, 1950
Bme18I GGWCC 1 cut(s) 1946
BmeT110I CYCGRG 2 cut(s) 855, 1520
BmgT120I GGNCC 1 cut(s) 1946
BmiI GGNNCC 1 cut(s) 1094
BmrFI CCNGG 3 cut(s) 604, 1602, 1950
BmrI ACTGGG 1 cut(s) 551
BmsI GCATC 9 cut(s) 911, 1046, 1167, 1218, 1486, 1579, 1643, 1645, 2044
BmuI ACTGGG 1 cut(s) 551
BplI GAGNNNNNCTC 4 cut(s) 1503, 1535, 2041, 2073
BpmI CTGGAG 2 cut(s) 625, 1776
BsaHI GRCGYC 1 cut(s) 49
BsaJI CCNNGG 2 cut(s) 948, 1600
Bsc4I CCNNNNNNNGG 4 cut(s) 994, 1089, 1353, 1499
Bse1I ACTGG 3 cut(s) 546, 1484, 1557
Bse3DI GCAATG 5 cut(s) 137, 219, 351, 522, 822
BseBI CCWGG 3 cut(s) 604, 1602, 1950
BseDI CCNNGG 2 cut(s) 948, 1600
BseGI GGATG 5 cut(s) 902, 1233, 1358, 1594, 1660
BseLI CCNNNNNNNGG 4 cut(s) 994, 1089, 1353, 1499
BseMI GCAATG 5 cut(s) 137, 219, 351, 522, 822
BseMII CTCAG 1 cut(s) 190
BseNI ACTGG 3 cut(s) 546, 1484, 1557
BseRI GAGGAG 1 cut(s) 1704
BseSI GKGCMC 1 cut(s) 1095
BseXI GCAGC 6 cut(s) 12, 544, 691, 799, 821, 1552
BsgI GTGCAG 3 cut(s) 41, 46, 783
BshFI GGCC 3 cut(s) 336, 1492, 1840
BshNI GGYRCC 1 cut(s) 1092
BsiHKAI GWGCWC 3 cut(s) 957, 1208, 1516
BsiHKCI CYCGRG 2 cut(s) 855, 1520
BslFI GGGAC 2 cut(s) 133, 1370
BslI CCNNNNNNNGG 4 cut(s) 994, 1089, 1353, 1499
BsmAI GTCTC 2 cut(s) 56, 1752
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 2 cut(s) 133, 1370
BsmI GAATGC 1 cut(s) 1485
BsnI GGCC 3 cut(s) 336, 1492, 1840
BsoBI CYCGRG 2 cut(s) 855, 1520
Bsp1286I GDGCHC 5 cut(s) 245, 957, 1095, 1208, 1516
Bsp1407I TGTACA 1 cut(s) 339
Bsp143I GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
BspACI CCGC 3 cut(s) 494, 837, 1592
BspANI GGCC 3 cut(s) 336, 1492, 1840
BspCNI CTCAG 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 1094
BspT107I GGYRCC 1 cut(s) 1092
BspTI CTTAAG 1 cut(s) 419
BsrDI GCAATG 5 cut(s) 137, 219, 351, 522, 822
BsrGI TGTACA 1 cut(s) 339
BsrI ACTGG 3 cut(s) 546, 1484, 1557
BssECI CCNNGG 2 cut(s) 948, 1600
BssMI GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
BssNI GRCGYC 1 cut(s) 49
BssT1I CCWWGG 1 cut(s) 948
Bst2UI CCWGG 3 cut(s) 604, 1602, 1950
Bst4CI ACNGT 3 cut(s) 536, 590, 595
Bst6I CTCTTC 4 cut(s) 272, 286, 1237, 1869
BstACI GRCGYC 1 cut(s) 49
BstAFI CTTAAG 1 cut(s) 419
BstAPI GCANNNNNTGC 1 cut(s) 1562
BstAUI TGTACA 1 cut(s) 339
BstC8I GCNNGC 6 cut(s) 832, 1050, 1054, 1324, 1917, 2089
BstDEI CTNAG 3 cut(s) 176, 1979, 2022
BstF5I GGATG 5 cut(s) 902, 1233, 1358, 1594, 1660
BstHHI GCGC 1 cut(s) 925
BstKTI GATC 8 cut(s) 315, 397, 445, 552, 800, 1126, 1429, 1442
BstMAI GTCTC 2 cut(s) 56, 1752
BstMBI GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
BstMWI GCNNNNNNNGC 5 cut(s) 127, 164, 230, 1489, 1562
BstNI CCWGG 3 cut(s) 604, 1602, 1950
BstNSI RCATGY 6 cut(s) 114, 1326, 1419, 1530, 1772, 2091
BstSCI CCNGG 3 cut(s) 602, 1600, 1948
BstSLI GKGCMC 1 cut(s) 1095
BstV1I GCAGC 6 cut(s) 12, 544, 691, 799, 821, 1552
BstX2I RGATCY 1 cut(s) 797
BstYI RGATCY 1 cut(s) 797
BsuRI GGCC 3 cut(s) 336, 1492, 1840
BtsCI GGATG 5 cut(s) 902, 1233, 1358, 1594, 1660
BtsI GCAGTG 1 cut(s) 58
BtsIMutI CAGTG 3 cut(s) 58, 794, 1317
Cac8I GCNNGC 6 cut(s) 832, 1050, 1054, 1324, 1917, 2089
CaiI CAGNNNCTG 1 cut(s) 1499
CfoI GCGC 1 cut(s) 925
Cfr13I GGNCC 1 cut(s) 1946
Csp6I GTAC 3 cut(s) 30, 340, 591
CviQI GTAC 3 cut(s) 30, 340, 591
DdeI CTNAG 3 cut(s) 176, 1979, 2022
DpnI GATC 8 cut(s) 314, 396, 444, 551, 799, 1125, 1428, 1441
DpnII GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
DraI TTTAAA 2 cut(s) 961, 1938
DraIII CACNNNGTG 1 cut(s) 1867
Eam1104I CTCTTC 4 cut(s) 272, 286, 1237, 1869
EarI CTCTTC 4 cut(s) 272, 286, 1237, 1869
Ecl136II GAGCTC 1 cut(s) 955
Eco130I CCWWGG 1 cut(s) 948
Eco24I GRGCYC 2 cut(s) 245, 957
Eco47I GGWCC 1 cut(s) 1946
Eco53kI GAGCTC 1 cut(s) 955
Eco57I CTGAAG 2 cut(s) 128, 770
Eco88I CYCGRG 2 cut(s) 855, 1520
EcoICRI GAGCTC 1 cut(s) 955
EcoRI GAATTC 1 cut(s) 1533
EcoRII CCWGG 3 cut(s) 602, 1600, 1948
EcoT14I CCWWGG 1 cut(s) 948
EcoT22I ATGCAT 4 cut(s) 116, 1233, 1417, 1636
EcoT38I GRGCYC 2 cut(s) 245, 957
ErhI CCWWGG 1 cut(s) 948
Esp3I CGTCTC 1 cut(s) 56
FaqI GGGAC 2 cut(s) 133, 1370
FauNDI CATATG 1 cut(s) 919
FbaI TGATCA 3 cut(s) 312, 394, 442
FblI GTMKAC 2 cut(s) 1447, 1740
Fnu4HI GCNGC 7 cut(s) 26, 495, 558, 705, 813, 835, 1566
FokI GGATG 5 cut(s) 889, 1240, 1365, 1601, 1667
FriOI GRGCYC 2 cut(s) 245, 957
Fsp4HI GCNGC 7 cut(s) 26, 495, 558, 705, 813, 835, 1566
FspBI CTAG 4 cut(s) 1034, 1118, 1158, 1716
FspI TGCGCA 1 cut(s) 924
GlaI GCGC 1 cut(s) 924
GluI GCNGC 7 cut(s) 26, 495, 558, 705, 813, 835, 1566
GsuI CTGGAG 2 cut(s) 625, 1776
HaeIII GGCC 3 cut(s) 336, 1492, 1840
HhaI GCGC 1 cut(s) 925
Hin1I GRCGYC 1 cut(s) 49
Hin6I GCGC 1 cut(s) 923
HinP1I GCGC 1 cut(s) 923
HincII GTYRAC 3 cut(s) 328, 1255, 1448
HindII GTYRAC 3 cut(s) 328, 1255, 1448
HindIII AAGCTT 1 cut(s) 1913
HinfI GANTC 9 cut(s) 478, 873, 982, 1015, 1060, 1819, 1975, 1983, 2064
HphI GGTGA 2 cut(s) 380, 904
Hpy166II GTNNAC 7 cut(s) 328, 388, 539, 1255, 1448, 1646, 1741
Hpy188I TCNGA 5 cut(s) 179, 289, 1269, 1780, 1795
Hpy188III TCNNGA 3 cut(s) 941, 1218, 1944
Hpy8I GTNNAC 7 cut(s) 328, 388, 539, 1255, 1448, 1646, 1741
HpyCH4III ACNGT 3 cut(s) 536, 590, 595
HpyCH4IV ACGT 3 cut(s) 49, 291, 1296
HpyF10VI GCNNNNNNNGC 5 cut(s) 127, 164, 230, 1489, 1562
HpyF3I CTNAG 3 cut(s) 176, 1979, 2022
HpySE526I ACGT 3 cut(s) 49, 291, 1296
Hsp92I GRCGYC 1 cut(s) 49
HspAI GCGC 1 cut(s) 923
Ksp22I TGATCA 3 cut(s) 312, 394, 442
Kzo9I GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
LmnI GCTCC 3 cut(s) 952, 1203, 1511
Lsp1109I GCAGC 6 cut(s) 12, 544, 691, 799, 821, 1552
LweI GCATC 9 cut(s) 911, 1046, 1167, 1218, 1486, 1579, 1643, 1645, 2044
MaeI CTAG 4 cut(s) 1034, 1118, 1158, 1716
MaeII ACGT 3 cut(s) 49, 291, 1296
MaeIII GTNAC 3 cut(s) 1099, 1764, 1832
MalI GATC 8 cut(s) 314, 396, 444, 551, 799, 1125, 1428, 1441
MboI GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
MboII GAAGA 7 cut(s) 193, 259, 273, 852, 1254, 1629, 1886
MflI RGATCY 1 cut(s) 797
MhlI GDGCHC 5 cut(s) 245, 957, 1095, 1208, 1516
MlyI GAGTC 1 cut(s) 1992
MmeI TCCRAC 1 cut(s) 1779
Mph1103I ATGCAT 4 cut(s) 116, 1233, 1417, 1636
MroXI GAANNNNTTC 1 cut(s) 1537
MseI TTAA 8 cut(s) 420, 734, 930, 960, 1676, 1784, 1937, 1968
MslI CAYNNNNRTG 3 cut(s) 471, 1236, 1748
MspCI CTTAAG 1 cut(s) 419
MspR9I CCNGG 3 cut(s) 604, 1602, 1950
Mva1269I GAATGC 1 cut(s) 1485
MvaI CCWGG 3 cut(s) 604, 1602, 1950
MwoI GCNNNNNNNGC 5 cut(s) 127, 164, 230, 1489, 1562
NdeI CATATG 1 cut(s) 919
NdeII GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
NlaIV GGNNCC 1 cut(s) 1094
NmuCI GTSAC 2 cut(s) 1099, 1764
NsbI TGCGCA 1 cut(s) 924
NsiI ATGCAT 4 cut(s) 116, 1233, 1417, 1636
NspI RCATGY 6 cut(s) 114, 1326, 1419, 1530, 1772, 2091
OliI CACNNNNGTG 1 cut(s) 1748
PaeI GCATGC 2 cut(s) 1326, 2091
PaeR7I CTCGAG 1 cut(s) 855
PcsI WCGNNNNNNNCGW 1 cut(s) 1444
PctI GAATGC 1 cut(s) 1485
PdmI GAANNNNTTC 1 cut(s) 1537
PfeI GAWTC 8 cut(s) 478, 873, 982, 1015, 1060, 1819, 1975, 2064
PflMI CCANNNNNTGG 1 cut(s) 1499
PfoI TCCNGGA 1 cut(s) 602
PkrI GCNGC 7 cut(s) 27, 496, 559, 706, 814, 836, 1567
PleI GAGTC 1 cut(s) 1991
PpsI GAGTC 1 cut(s) 1991
PshBI ATTAAT 1 cut(s) 1968
PsiI TTATAA 1 cut(s) 1811
Psp124BI GAGCTC 1 cut(s) 957
Psp6I CCWGG 3 cut(s) 602, 1600, 1948
PspGI CCWGG 3 cut(s) 602, 1600, 1948
PspN4I GGNNCC 1 cut(s) 1094
PspPI GGNCC 1 cut(s) 1946
PspXI VCTCGAGB 1 cut(s) 855
PstNI CAGNNNCTG 1 cut(s) 1499
PsuI RGATCY 1 cut(s) 797
RsaI GTAC 3 cut(s) 31, 341, 592
RsaNI GTAC 3 cut(s) 30, 340, 591
RseI CAYNNNNRTG 3 cut(s) 471, 1236, 1748
SacI GAGCTC 1 cut(s) 957
SalI GTCGAC 1 cut(s) 1446
SaqAI TTAA 8 cut(s) 420, 734, 930, 960, 1676, 1784, 1937, 1968
SatI GCNGC 7 cut(s) 26, 495, 558, 705, 813, 835, 1566
Sau3AI GATC 8 cut(s) 312, 394, 442, 549, 797, 1123, 1426, 1439
Sau96I GGNCC 1 cut(s) 1946
SchI GAGTC 1 cut(s) 1992
ScrFI CCNGG 3 cut(s) 604, 1602, 1950
SduI GDGCHC 5 cut(s) 245, 957, 1095, 1208, 1516
SfaNI GCATC 9 cut(s) 911, 1046, 1167, 1218, 1486, 1579, 1643, 1645, 2044
Sfr274I CTCGAG 1 cut(s) 855
SinI GGWCC 1 cut(s) 1946
SlaI CTCGAG 1 cut(s) 855
SmiMI CAYNNNNRTG 3 cut(s) 471, 1236, 1748
SmlI CTYRAG 2 cut(s) 419, 855
SmoI CTYRAG 2 cut(s) 419, 855
SpeI ACTAGT 1 cut(s) 1715
SphI GCATGC 2 cut(s) 1326, 2091
SsiI CCGC 3 cut(s) 494, 837, 1592
SspI AATATT 1 cut(s) 1627
SspMI CTAG 4 cut(s) 1034, 1118, 1158, 1716
SstI GAGCTC 1 cut(s) 957
StyD4I CCNGG 3 cut(s) 602, 1600, 1948
StyI CCWWGG 1 cut(s) 948
TaaI ACNGT 3 cut(s) 536, 590, 595
TaiI ACGT 3 cut(s) 52, 294, 1299
TaqI TCGA 5 cut(s) 552, 856, 1438, 1447, 1606
TatI WGTACW 1 cut(s) 339
TauI GCSGC 1 cut(s) 497
TfiI GAWTC 8 cut(s) 478, 873, 982, 1015, 1060, 1819, 1975, 2064
Tru1I TTAA 8 cut(s) 420, 734, 930, 960, 1676, 1784, 1937, 1968
Tru9I TTAA 8 cut(s) 420, 734, 930, 960, 1676, 1784, 1937, 1968
TscAI CASTG 3 cut(s) 65, 794, 1317
TseFI GTSAC 2 cut(s) 1099, 1764
TseI GCWGC 6 cut(s) 25, 557, 704, 812, 834, 1565
Tsp45I GTSAC 2 cut(s) 1099, 1764
TspDTI ATGAA 7 cut(s) 455, 1253, 1286, 1470, 1526, 1694, 1895
TspGWI ACGGA 1 cut(s) 1080
TspRI CASTG 3 cut(s) 65, 794, 1317
Van91I CCANNNNNTGG 1 cut(s) 1499
Vha464I CTTAAG 1 cut(s) 419
VpaK11BI GGWCC 1 cut(s) 1946
VspI ATTAAT 1 cut(s) 1968
XapI RAATTY 4 cut(s) 579, 1533, 1573, 1939
XceI RCATGY 6 cut(s) 114, 1326, 1419, 1530, 1772, 2091
XcmI CCANNNNNNNNNTGG 1 cut(s) 2078
XhoI CTCGAG 1 cut(s) 855
XmiI GTMKAC 2 cut(s) 1447, 1740
XmnI GAANNNNTTC 1 cut(s) 1537
XspI CTAG 4 cut(s) 1034, 1118, 1158, 1716
ZraI GACGTC 1 cut(s) 50
Zsp2I ATGCAT 4 cut(s) 116, 1233, 1417, 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.