ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 23, 111 |
| AfaI | GTAC | 2 cut(s) | 278, 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 62 |
| AflIII | ACRYGT | 1 cut(s) | 241 |
| AgsI | TTSAA | 3 cut(s) | 155, 169, 178 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 72 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 29, 61 |
| AluBI | AGCT | 3 cut(s) | 92, 98, 130 |
| AluI | AGCT | 3 cut(s) | 92, 98, 130 |
| ApoI | RAATTY | 2 cut(s) | 23, 111 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| BccI | CCATC | 3 cut(s) | 56, 241, 256 |
| BfaI | CTAG | 1 cut(s) | 141 |
| BfmI | CTRYAG | 1 cut(s) | 93 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 72 |
| BmsI | GCATC | 1 cut(s) | 151 |
| BpuEI | CTTGAG | 1 cut(s) | 226 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 62 |
| BseGI | GGATG | 2 cut(s) | 39, 238 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BseYI | CCCAGC | 1 cut(s) | 130 |
| BsgI | GTGCAG | 1 cut(s) | 27 |
| BslFI | GGGAC | 1 cut(s) | 79 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BsmFI | GGGAC | 1 cut(s) | 79 |
| Bst4CI | ACNGT | 1 cut(s) | 191 |
| BstDEI | CTNAG | 1 cut(s) | 71 |
| BstF5I | GGATG | 2 cut(s) | 39, 238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 89 |
| BstNSI | RCATGY | 1 cut(s) | 245 |
| BstSFI | CTRYAG | 1 cut(s) | 93 |
| BtsCI | GGATG | 2 cut(s) | 39, 238 |
| Csp6I | GTAC | 2 cut(s) | 277, 292 |
| CviAII | CATG | 1 cut(s) | 242 |
| CviJI | RGCY | 7 cut(s) | 50, 92, 98, 130, 182, 198, 221 |
| CviKI_1 | RGCY | 7 cut(s) | 50, 92, 98, 130, 182, 198, 221 |
| CviQI | GTAC | 2 cut(s) | 277, 292 |
| DdeI | CTNAG | 1 cut(s) | 71 |
| DriI | GACNNNNNGTC | 1 cut(s) | 72 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 72 |
| EcoRI | GAATTC | 1 cut(s) | 111 |
| FaeI | CATG | 1 cut(s) | 245 |
| FaiI | YATR | 2 cut(s) | 108, 243 |
| FaqI | GGGAC | 1 cut(s) | 79 |
| FatI | CATG | 1 cut(s) | 241 |
| FokI | GGATG | 2 cut(s) | 46, 245 |
| FspBI | CTAG | 1 cut(s) | 141 |
| GsaI | CCCAGC | 1 cut(s) | 134 |
| Hin1II | CATG | 1 cut(s) | 245 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy188III | TCNNGA | 1 cut(s) | 17 |
| HpyAV | CCTTC | 4 cut(s) | 24, 31, 149, 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 191 |
| HpyCH4IV | ACGT | 1 cut(s) | 279 |
| HpyCH4V | TGCA | 2 cut(s) | 8, 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 89 |
| HpyF3I | CTNAG | 1 cut(s) | 71 |
| HpySE526I | ACGT | 1 cut(s) | 279 |
| Hsp92II | CATG | 1 cut(s) | 245 |
| LpnPI | CCDG | 2 cut(s) | 69, 116 |
| LweI | GCATC | 1 cut(s) | 151 |
| MaeI | CTAG | 1 cut(s) | 141 |
| MaeII | ACGT | 1 cut(s) | 279 |
| MluCI | AATT | 3 cut(s) | 23, 111, 295 |
| MmeI | TCCRAC | 1 cut(s) | 237 |
| MnlI | CCTC | 1 cut(s) | 223 |
| MseI | TTAA | 3 cut(s) | 101, 237, 267 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 89 |
| NlaIII | CATG | 1 cut(s) | 245 |
| NspI | RCATGY | 1 cut(s) | 245 |
| PciI | ACATGT | 1 cut(s) | 241 |
| PscI | ACATGT | 1 cut(s) | 241 |
| PspFI | CCCAGC | 1 cut(s) | 130 |
| RsaI | GTAC | 2 cut(s) | 278, 293 |
| RsaNI | GTAC | 2 cut(s) | 277, 292 |
| SaqAI | TTAA | 3 cut(s) | 101, 237, 267 |
| SetI | ASST | 5 cut(s) | 94, 100, 132, 160, 282 |
| SfaNI | GCATC | 1 cut(s) | 151 |
| SfcI | CTRYAG | 1 cut(s) | 93 |
| SgeI | CNNG | 7 cut(s) | 29, 68, 143, 153, 178, 217, 254 |
| SmlI | CTYRAG | 1 cut(s) | 205 |
| SmoI | CTYRAG | 1 cut(s) | 205 |
| Sse9I | AATT | 3 cut(s) | 23, 111, 295 |
| SspMI | CTAG | 1 cut(s) | 141 |
| TaaI | ACNGT | 1 cut(s) | 191 |
| TaiI | ACGT | 1 cut(s) | 282 |
| TasI | AATT | 3 cut(s) | 23, 111, 295 |
| TatI | WGTACW | 1 cut(s) | 291 |
| Tru1I | TTAA | 3 cut(s) | 101, 237, 267 |
| Tru9I | TTAA | 3 cut(s) | 101, 237, 267 |
| TspDTI | ATGAA | 2 cut(s) | 36, 50 |
| TspGWI | ACGGA | 1 cut(s) | 66 |
| XapI | RAATTY | 2 cut(s) | 23, 111 |
| XceI | RCATGY | 1 cut(s) | 245 |
| XspI | CTAG | 1 cut(s) | 141 |