Prupe.3G063400_v2.0.a1

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000072
Physical Location & Seq
Reverse (-)
4544446 .. 4545734
1289 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G063400.1

Sequence Viewer

Length: 1161 bp
ATGCTGTGGGGAGATGGGGCAGATACTTTAGTTTATGGAGATGCTTGGATTCCTAGGCCTACTTCTTTTCGCTCTATCTCTCCTCCCGTGCTGGATCAAGAAACCAAAATAATTGCTTTTATTTTTCCTAATGGGGTATGGAATATTGAATTGTTAAAACTGTGTTTCTATGAGGAAGATGTCAGGGCCAGTGCTAATTATCATAAGGATAGATGGATATGGCACTATACTAATAATGGAATTTATTCTGTGAAAAACTGCAATGGGGATGCTGGCTCCTCTTCGGATCCAAGAGCCCAAAATTCTTTTTGGAGGAAAGTTTGGTCCCTAGAGATACCACAAAAACTCATCTTTTTTAATTGGAGAGCTATCCACAAGTCTCGTCCTTGCAAAGCTAATCTTCTTAAGAGGAAAATTGTTTCTGATGACGCTTGCCCCATCTGTATTGTAAATTCTGAAAATCTAATACATGTAGTTTGGAGTTGTCCTGGGGCCCAAAAAGTTTGGAAGAAAGTGAGATTCATGGAGGTTTTTAAAGGGCTGCAGTTGTCCACTTATGGTGATTTCTTTGAAGCTTGTTCTAAAAAAGAAGAAATGATTTTTAATGGAGCAGTTCATTTGACTGAGGAATATGGAGATCTAATGAGAAGAGAATCTAATATAGTTATTGAAAAGGCTTCCAAATGGTCTCACCCTCCTGTTGGTAAGTTTAAACTCAATGTAGATGCTGCTTATATTCCTGATACGGGTGTGGGTGGAATTGGTGCTGTCATTAGAAATGAGAAAGGGGAAGTGATGGTGGCTACGGCCCTTCCCCTTCACACTGCCACCTCCCCCAAACATGCCGAGATCATGGCACTTCAATTCGGGTTGAACTTTGCTTGGGATGCAGGCTTCTCTTCTATCCTGGTTGAGTCTGATTCACAAACAGTGGTTAACAATTTAAATACTGATGAGGAGTCTTTCGCACCAAAAGGGCATCTCATTGATGATGTCAAGAGGAGTTTGCAACAGTTAGAGAATGCTACCGTCTCTTTCATTCCAAGCGGATGTAATCAGGTTGGAATAATTTTACCAAAAGAAATGACAGCTTTCTATGAGCATTCAGGAAAGCAGAAAATTAAGATAGGAAGAGGAGCAGGCATCCAACTTTGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

387

Amino Acids

43.35

Weight (kDa)

8.0

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 1047
AclWI GGATC 3 cut(s) 102, 281, 294
AcsI RAATTY 3 cut(s) 240, 301, 451
AfiI CCNNNNNNNGG 2 cut(s) 701, 746
AflII CTTAAG 1 cut(s) 404
AflIII ACRYGT 1 cut(s) 469
AgsI TTSAA 5 cut(s) 149, 572, 671, 863, 874
AjnI CCWGG 2 cut(s) 487, 906
AluBI AGCT 4 cut(s) 368, 395, 575, 1091
AluI AGCT 4 cut(s) 368, 395, 575, 1091
Alw26I GTCTC 3 cut(s) 384, 693, 1036
AlwI GGATC 3 cut(s) 102, 281, 294
AoxI GGCC 4 cut(s) 56, 186, 492, 807
ApaI GGGCCC 1 cut(s) 496
ApeKI GCWGC 2 cut(s) 541, 728
ApoI RAATTY 3 cut(s) 240, 301, 451
Asp700I GAANNNNTTC 1 cut(s) 244
AspA2I CCTAGG 1 cut(s) 53
AspS9I GGNCC 5 cut(s) 186, 324, 492, 493, 808
AsuHPI GGTGA 2 cut(s) 572, 683
AvaII GGWCC 1 cut(s) 324
AvrII CCTAGG 1 cut(s) 53
BaeGI GKGCMC 1 cut(s) 496
BaeI ACNNNNGTAYC 4 cut(s) 15, 48, 735, 768
BamHI GGATCC 1 cut(s) 286
BanII GRGCYC 2 cut(s) 298, 496
BbvI GCAGC 2 cut(s) 528, 715
BccI CCATC 4 cut(s) 8, 207, 446, 790
BceAI ACGGC 1 cut(s) 822
BciT130I CCWGG 2 cut(s) 489, 908
BcoDI GTCTC 3 cut(s) 384, 693, 1036
BfaI CTAG 2 cut(s) 54, 329
BfmI CTRYAG 1 cut(s) 542
BfrI CTTAAG 1 cut(s) 404
BglII AGATCT 1 cut(s) 637
BisI GCNGC 2 cut(s) 542, 729
BlnI CCTAGG 1 cut(s) 53
BlsI GCNGC 2 cut(s) 543, 730
Bme1390I CCNGG 2 cut(s) 489, 908
Bme18I GGWCC 1 cut(s) 324
BmgT120I GGNCC 5 cut(s) 186, 324, 492, 493, 808
BmiI GGNNCC 5 cut(s) 277, 288, 326, 493, 494
BmrFI CCNGG 2 cut(s) 489, 908
BmsI GCATC 6 cut(s) 31, 259, 715, 877, 988, 1152
BsaI GGTCTC 1 cut(s) 693
BsaJI CCNNGG 2 cut(s) 53, 488
Bsc4I CCNNNNNNNGG 2 cut(s) 701, 746
Bse1I ACTGG 1 cut(s) 189
Bse3DI GCAATG 1 cut(s) 268
BseBI CCWGG 2 cut(s) 489, 908
BseDI CCNNGG 2 cut(s) 53, 488
BseGI GGATG 4 cut(s) 274, 892, 1055, 1143
BseLI CCNNNNNNNGG 2 cut(s) 701, 746
BseMI GCAATG 1 cut(s) 268
BseMII CTCAG 1 cut(s) 615
BseNI ACTGG 1 cut(s) 189
BseRI GAGGAG 5 cut(s) 72, 268, 971, 1015, 1149
BseSI GKGCMC 1 cut(s) 496
BseXI GCAGC 2 cut(s) 528, 715
BshFI GGCC 4 cut(s) 58, 188, 494, 809
BslFI GGGAC 1 cut(s) 310
BslI CCNNNNNNNGG 2 cut(s) 701, 746
BsmAI GTCTC 3 cut(s) 384, 693, 1036
BsmBI CGTCTC 1 cut(s) 1036
BsmFI GGGAC 1 cut(s) 310
BsmI GAATGC 2 cut(s) 1027, 1102
BsnI GGCC 4 cut(s) 58, 188, 494, 809
Bso31I GGTCTC 1 cut(s) 693
Bsp120I GGGCCC 1 cut(s) 492
Bsp1286I GDGCHC 2 cut(s) 298, 496
Bsp143I GATC 4 cut(s) 94, 286, 637, 849
BspACI CCGC 1 cut(s) 1047
BspANI GGCC 4 cut(s) 58, 188, 494, 809
BspCNI CTCAG 1 cut(s) 616
BspLI GGNNCC 5 cut(s) 277, 288, 326, 493, 494
BspMAI CTGCAG 1 cut(s) 546
BspPI GGATC 3 cut(s) 102, 281, 294
BspTI CTTAAG 1 cut(s) 404
BspTNI GGTCTC 1 cut(s) 693
BsrDI GCAATG 1 cut(s) 268
BsrI ACTGG 1 cut(s) 189
BssECI CCNNGG 2 cut(s) 53, 488
BssMI GATC 4 cut(s) 94, 286, 637, 849
BssT1I CCWWGG 1 cut(s) 53
Bst2UI CCWGG 2 cut(s) 489, 908
Bst4CI ACNGT 4 cut(s) 162, 931, 1014, 1030
Bst6I CTCTTC 4 cut(s) 286, 643, 904, 1126
BstAFI CTTAAG 1 cut(s) 404
BstC8I GCNNGC 4 cut(s) 274, 433, 892, 1141
BstDEI CTNAG 1 cut(s) 624
BstF5I GGATG 4 cut(s) 274, 892, 1055, 1143
BstKTI GATC 4 cut(s) 97, 289, 640, 852
BstMAI GTCTC 3 cut(s) 384, 693, 1036
BstMBI GATC 4 cut(s) 94, 286, 637, 849
BstMWI GCNNNNNNNGC 1 cut(s) 887
BstNI CCWGG 2 cut(s) 489, 908
BstNSI RCATGY 2 cut(s) 473, 845
BstSCI CCNGG 2 cut(s) 487, 906
BstSFI CTRYAG 1 cut(s) 542
BstSLI GKGCMC 1 cut(s) 496
BstV1I GCAGC 2 cut(s) 528, 715
BstX2I RGATCY 2 cut(s) 286, 637
BstYI RGATCY 2 cut(s) 286, 637
BsuRI GGCC 4 cut(s) 58, 188, 494, 809
BtsCI GGATG 4 cut(s) 274, 892, 1055, 1143
BtsI GCAGTG 1 cut(s) 822
BtsIMutI CAGTG 3 cut(s) 196, 822, 936
Cac8I GCNNGC 4 cut(s) 274, 433, 892, 1141
Cfr13I GGNCC 5 cut(s) 186, 324, 492, 493, 808
CseI GACGC 1 cut(s) 437
CviAII CATG 4 cut(s) 470, 523, 842, 853
DdeI CTNAG 1 cut(s) 624
DpnI GATC 4 cut(s) 96, 288, 639, 851
DpnII GATC 4 cut(s) 94, 286, 637, 849
DraI TTTAAA 3 cut(s) 535, 712, 945
Eam1104I CTCTTC 4 cut(s) 286, 643, 904, 1126
EarI CTCTTC 4 cut(s) 286, 643, 904, 1126
Eco130I CCWWGG 1 cut(s) 53
Eco147I AGGCCT 1 cut(s) 58
Eco24I GRGCYC 2 cut(s) 298, 496
Eco31I GGTCTC 1 cut(s) 693
Eco47I GGWCC 1 cut(s) 324
EcoO109I RGGNCCY 1 cut(s) 492
EcoRII CCWGG 2 cut(s) 487, 906
EcoT14I CCWWGG 1 cut(s) 53
EcoT38I GRGCYC 2 cut(s) 298, 496
ErhI CCWWGG 1 cut(s) 53
Esp3I CGTCTC 1 cut(s) 1036
FaeI CATG 4 cut(s) 473, 526, 845, 856
FalI AAGNNNNNCTT 2 cut(s) 384, 416
FaqI GGGAC 1 cut(s) 310
FatI CATG 4 cut(s) 469, 522, 841, 852
Fnu4HI GCNGC 2 cut(s) 542, 729
FokI GGATG 4 cut(s) 281, 899, 1062, 1130
FriOI GRGCYC 2 cut(s) 298, 496
Fsp4HI GCNGC 2 cut(s) 542, 729
FspBI CTAG 2 cut(s) 54, 329
GluI GCNGC 2 cut(s) 542, 729
HaeIII GGCC 4 cut(s) 58, 188, 494, 809
HgaI GACGC 1 cut(s) 437
Hin1II CATG 4 cut(s) 473, 526, 845, 856
HincII GTYRAC 1 cut(s) 937
HindII GTYRAC 1 cut(s) 937
HindIII AAGCTT 1 cut(s) 573
HinfI GANTC 6 cut(s) 49, 519, 653, 914, 920, 959
HpaI GTTAAC 1 cut(s) 937
HphI GGTGA 2 cut(s) 572, 683
Hpy166II GTNNAC 2 cut(s) 552, 937
Hpy188I TCNGA 4 cut(s) 286, 424, 457, 919
Hpy188III TCNNGA 4 cut(s) 98, 740, 997, 1107
Hpy8I GTNNAC 2 cut(s) 552, 937
HpyAV CCTTC 2 cut(s) 821, 827
HpyCH4III ACNGT 4 cut(s) 162, 931, 1014, 1030
HpyCH4V TGCA 6 cut(s) 261, 390, 544, 890, 1009, 1155
HpyF10VI GCNNNNNNNGC 1 cut(s) 887
HpyF3I CTNAG 1 cut(s) 624
Hsp92II CATG 4 cut(s) 473, 526, 845, 856
KspAI GTTAAC 1 cut(s) 937
Kzo9I GATC 4 cut(s) 94, 286, 637, 849
LmnI GCTCC 3 cut(s) 281, 608, 1136
Lsp1109I GCAGC 2 cut(s) 528, 715
LweI GCATC 6 cut(s) 31, 259, 715, 877, 988, 1152
MaeI CTAG 2 cut(s) 54, 329
MalI GATC 4 cut(s) 96, 288, 639, 851
MboI GATC 4 cut(s) 94, 286, 637, 849
MboII GAAGA 8 cut(s) 188, 273, 392, 520, 602, 660, 891, 1143
MflI RGATCY 2 cut(s) 286, 637
MhlI GDGCHC 2 cut(s) 298, 496
MlyI GAGTC 2 cut(s) 923, 968
MmeI TCCRAC 1 cut(s) 1042
MroXI GAANNNNTTC 1 cut(s) 244
MseI TTAA 9 cut(s) 155, 357, 405, 534, 603, 711, 936, 944, 1122
MspCI CTTAAG 1 cut(s) 404
MspR9I CCNGG 2 cut(s) 489, 908
MssI GTTTAAAC 1 cut(s) 712
Mva1269I GAATGC 2 cut(s) 1027, 1102
MvaI CCWGG 2 cut(s) 489, 908
MwoI GCNNNNNNNGC 1 cut(s) 887
NdeII GATC 4 cut(s) 94, 286, 637, 849
NlaIII CATG 4 cut(s) 473, 526, 845, 856
NlaIV GGNNCC 5 cut(s) 277, 288, 326, 493, 494
NmeAIII GCCGAG 1 cut(s) 871
NspI RCATGY 2 cut(s) 473, 845
PceI AGGCCT 1 cut(s) 58
PciI ACATGT 1 cut(s) 469
PctI GAATGC 2 cut(s) 1027, 1102
PdmI GAANNNNTTC 1 cut(s) 244
PfeI GAWTC 4 cut(s) 49, 519, 653, 920
PkrI GCNGC 2 cut(s) 543, 730
PleI GAGTC 2 cut(s) 922, 967
PmeI GTTTAAAC 1 cut(s) 712
PpsI GAGTC 2 cut(s) 922, 967
PscI ACATGT 1 cut(s) 469
Psp6I CCWGG 2 cut(s) 487, 906
PspGI CCWGG 2 cut(s) 487, 906
PspN4I GGNNCC 5 cut(s) 277, 288, 326, 493, 494
PspOMI GGGCCC 1 cut(s) 492
PspPI GGNCC 5 cut(s) 186, 324, 492, 493, 808
PstI CTGCAG 1 cut(s) 546
PsuI RGATCY 2 cut(s) 286, 637
SaqAI TTAA 9 cut(s) 155, 357, 405, 534, 603, 711, 936, 944, 1122
SatI GCNGC 2 cut(s) 542, 729
Sau3AI GATC 4 cut(s) 94, 286, 637, 849
Sau96I GGNCC 5 cut(s) 186, 324, 492, 493, 808
SchI GAGTC 2 cut(s) 923, 968
ScrFI CCNGG 2 cut(s) 489, 908
SduI GDGCHC 2 cut(s) 298, 496
SetI ASST 7 cut(s) 370, 397, 531, 577, 833, 1062, 1093
SfaNI GCATC 6 cut(s) 31, 259, 715, 877, 988, 1152
SfcI CTRYAG 1 cut(s) 542
SinI GGWCC 1 cut(s) 324
SmiI ATTTAAAT 1 cut(s) 945
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
SseBI AGGCCT 1 cut(s) 58
SsiI CCGC 1 cut(s) 1047
SspI AATATT 1 cut(s) 145
SspMI CTAG 2 cut(s) 54, 329
StuI AGGCCT 1 cut(s) 58
StyD4I CCNGG 2 cut(s) 487, 906
StyI CCWWGG 1 cut(s) 53
SwaI ATTTAAAT 1 cut(s) 945
TaaI ACNGT 4 cut(s) 162, 931, 1014, 1030
TfiI GAWTC 4 cut(s) 49, 519, 653, 920
Tru1I TTAA 9 cut(s) 155, 357, 405, 534, 603, 711, 936, 944, 1122
Tru9I TTAA 9 cut(s) 155, 357, 405, 534, 603, 711, 936, 944, 1122
TscAI CASTG 3 cut(s) 196, 829, 936
TseI GCWGC 2 cut(s) 541, 728
TspDTI ATGAA 3 cut(s) 511, 605, 1027
TspRI CASTG 3 cut(s) 196, 829, 936
Vha464I CTTAAG 1 cut(s) 404
VpaK11BI GGWCC 1 cut(s) 324
XapI RAATTY 3 cut(s) 240, 301, 451
XceI RCATGY 2 cut(s) 473, 845
XmaJI CCTAGG 1 cut(s) 53
XmnI GAANNNNTTC 1 cut(s) 244
XspI CTAG 2 cut(s) 54, 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.