ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 5 - 114 | 2e-21 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 77 |
| AccII | CGCG | 1 cut(s) | 334 |
| AcsI | RAATTY | 1 cut(s) | 254 |
| AcuI | CTGAAG | 2 cut(s) | 123, 281 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 77, 226 |
| AgsI | TTSAA | 3 cut(s) | 170, 245, 284 |
| AluBI | AGCT | 4 cut(s) | 49, 59, 236, 269 |
| AluI | AGCT | 4 cut(s) | 49, 59, 236, 269 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| AoxI | GGCC | 1 cut(s) | 89 |
| ApeKI | GCWGC | 3 cut(s) | 49, 179, 191 |
| ApoI | RAATTY | 1 cut(s) | 254 |
| AspLEI | GCGC | 1 cut(s) | 334 |
| AsuHPI | GGTGA | 1 cut(s) | 175 |
| BanII | GRGCYC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BbvI | GCAGC | 3 cut(s) | 36, 191, 203 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BfmI | CTRYAG | 1 cut(s) | 344 |
| BisI | GCNGC | 3 cut(s) | 50, 180, 192 |
| BlsI | GCNGC | 3 cut(s) | 51, 181, 193 |
| BmsI | GCATC | 2 cut(s) | 76, 166 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 77, 226 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 77, 226 |
| BseXI | GCAGC | 3 cut(s) | 36, 191, 203 |
| BsgI | GTGCAG | 1 cut(s) | 42 |
| Bsh1236I | CGCG | 1 cut(s) | 334 |
| BshFI | GGCC | 1 cut(s) | 91 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 77, 226 |
| BsnI | GGCC | 1 cut(s) | 91 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| BspANI | GGCC | 1 cut(s) | 91 |
| BspFNI | CGCG | 1 cut(s) | 334 |
| BspHI | TCATGA | 1 cut(s) | 208 |
| BspMAI | CTGCAG | 1 cut(s) | 348 |
| BstC8I | GCNNGC | 1 cut(s) | 267 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstFNI | CGCG | 1 cut(s) | 334 |
| BstHHI | GCGC | 1 cut(s) | 334 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 20, 104, 188, 338 |
| BstSFI | CTRYAG | 1 cut(s) | 344 |
| BstUI | CGCG | 1 cut(s) | 334 |
| BstV1I | GCAGC | 3 cut(s) | 36, 191, 203 |
| BsuRI | GGCC | 1 cut(s) | 91 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 1 cut(s) | 267 |
| CciI | TCATGA | 1 cut(s) | 208 |
| CfoI | GCGC | 1 cut(s) | 334 |
| CviAII | CATG | 1 cut(s) | 209 |
| CviJI | RGCY | 9 cut(s) | 49, 59, 91, 113, 150, 236, 269, 320, 341 |
| CviKI_1 | RGCY | 9 cut(s) | 49, 59, 91, 113, 150, 236, 269, 320, 341 |
| Ecl136II | GAGCTC | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 61 |
| Eco53kI | GAGCTC | 1 cut(s) | 59 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 281 |
| EcoICRI | GAGCTC | 1 cut(s) | 59 |
| EcoT22I | ATGCAT | 1 cut(s) | 69 |
| EcoT38I | GRGCYC | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 212 |
| FaiI | YATR | 4 cut(s) | 123, 210, 227, 358 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 122, 154 |
| FatI | CATG | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 3 cut(s) | 50, 180, 192 |
| FokI | GGATG | 1 cut(s) | 54 |
| FriOI | GRGCYC | 1 cut(s) | 61 |
| Fsp4HI | GCNGC | 3 cut(s) | 50, 180, 192 |
| FspBI | CTAG | 1 cut(s) | 300 |
| GlaI | GCGC | 1 cut(s) | 333 |
| GluI | GCNGC | 3 cut(s) | 50, 180, 192 |
| HaeIII | GGCC | 1 cut(s) | 91 |
| HhaI | GCGC | 1 cut(s) | 334 |
| Hin1II | CATG | 1 cut(s) | 212 |
| Hin6I | GCGC | 1 cut(s) | 332 |
| HinP1I | GCGC | 1 cut(s) | 332 |
| HindIII | AAGCTT | 1 cut(s) | 267 |
| HinfI | GANTC | 2 cut(s) | 28, 295 |
| HphI | GGTGA | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 1 cut(s) | 261 |
| Hpy188III | TCNNGA | 2 cut(s) | 32, 209 |
| HpyAV | CCTTC | 2 cut(s) | 35, 224 |
| HpyCH4V | TGCA | 6 cut(s) | 23, 52, 67, 179, 309, 346 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 20, 104, 188, 338 |
| Hsp92II | CATG | 1 cut(s) | 212 |
| HspAI | GCGC | 1 cut(s) | 332 |
| LmnI | GCTCC | 2 cut(s) | 56, 233 |
| LpnPI | CCDG | 1 cut(s) | 63 |
| Lsp1109I | GCAGC | 3 cut(s) | 36, 191, 203 |
| LweI | GCATC | 2 cut(s) | 76, 166 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MboII | GAAGA | 3 cut(s) | 257, 301, 304 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MluCI | AATT | 3 cut(s) | 198, 249, 254 |
| MnlI | CCTC | 4 cut(s) | 81, 230, 268, 331 |
| Mph1103I | ATGCAT | 1 cut(s) | 69 |
| MseI | TTAA | 2 cut(s) | 140, 252 |
| MvnI | CGCG | 1 cut(s) | 334 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 20, 104, 188, 338 |
| NlaIII | CATG | 1 cut(s) | 212 |
| NsiI | ATGCAT | 1 cut(s) | 69 |
| PagI | TCATGA | 1 cut(s) | 208 |
| PfeI | GAWTC | 2 cut(s) | 28, 295 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 77 |
| PkrI | GCNGC | 3 cut(s) | 51, 181, 193 |
| Psp124BI | GAGCTC | 1 cut(s) | 61 |
| PstI | CTGCAG | 1 cut(s) | 348 |
| SacI | GAGCTC | 1 cut(s) | 61 |
| SaqAI | TTAA | 2 cut(s) | 140, 252 |
| SatI | GCNGC | 3 cut(s) | 50, 180, 192 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 5 cut(s) | 51, 61, 222, 238, 271 |
| SfaNI | GCATC | 2 cut(s) | 76, 166 |
| SfcI | CTRYAG | 1 cut(s) | 344 |
| Sse9I | AATT | 3 cut(s) | 198, 249, 254 |
| SspMI | CTAG | 1 cut(s) | 300 |
| SstI | GAGCTC | 1 cut(s) | 61 |
| TaqI | TCGA | 1 cut(s) | 31 |
| TasI | AATT | 3 cut(s) | 198, 249, 254 |
| TfiI | GAWTC | 2 cut(s) | 28, 295 |
| Tru1I | TTAA | 2 cut(s) | 140, 252 |
| Tru9I | TTAA | 2 cut(s) | 140, 252 |
| TscAI | CASTG | 1 cut(s) | 30 |
| TseI | GCWGC | 3 cut(s) | 49, 179, 191 |
| TspDTI | ATGAA | 1 cut(s) | 143 |
| TspRI | CASTG | 1 cut(s) | 30 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 77 |
| XapI | RAATTY | 1 cut(s) | 254 |
| XspI | CTAG | 1 cut(s) | 300 |
| Zsp2I | ATGCAT | 1 cut(s) | 69 |