Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 298 |
| Acc65I | GGTACC | 1 cut(s) | 539 |
| AccB1I | GGYRCC | 2 cut(s) | 211, 539 |
| AccI | GTMKAC | 1 cut(s) | 233 |
| AciI | CCGC | 5 cut(s) | 121, 218, 222, 248, 392 |
| AcoI | YGGCCR | 1 cut(s) | 219 |
| AcsI | RAATTY | 1 cut(s) | 295 |
| AcyI | GRCGYC | 1 cut(s) | 212 |
| AfaI | GTAC | 2 cut(s) | 541, 571 |
| AflII | CTTAAG | 1 cut(s) | 404 |
| AgsI | TTSAA | 4 cut(s) | 23, 74, 91, 326 |
| AluBI | AGCT | 5 cut(s) | 38, 329, 403, 496, 658 |
| AluI | AGCT | 5 cut(s) | 38, 329, 403, 496, 658 |
| Alw21I | GWGCWC | 1 cut(s) | 639 |
| Alw26I | GTCTC | 1 cut(s) | 614 |
| AoxI | GGCC | 3 cut(s) | 219, 389, 588 |
| ApoI | RAATTY | 1 cut(s) | 295 |
| Asp718I | GGTACC | 1 cut(s) | 539 |
| AspLEI | GCGC | 1 cut(s) | 214 |
| AspS9I | GGNCC | 1 cut(s) | 307 |
| AsuHPI | GGTGA | 2 cut(s) | 99, 148 |
| AvaII | GGWCC | 1 cut(s) | 307 |
| BanI | GGYRCC | 2 cut(s) | 211, 539 |
| BauI | CACGAG | 1 cut(s) | 395 |
| BbsI | GAAGAC | 1 cut(s) | 261 |
| Bbv12I | GWGCWC | 1 cut(s) | 639 |
| BccI | CCATC | 2 cut(s) | 324, 500 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 127, 161 |
| BcoDI | GTCTC | 1 cut(s) | 614 |
| BfmI | CTRYAG | 1 cut(s) | 127 |
| BfoI | RGCGCY | 1 cut(s) | 215 |
| BfrI | CTTAAG | 1 cut(s) | 404 |
| BisI | GCNGC | 4 cut(s) | 219, 222, 249, 392 |
| BlsI | GCNGC | 4 cut(s) | 220, 223, 250, 393 |
| Bme18I | GGWCC | 1 cut(s) | 307 |
| BmgT120I | GGNCC | 1 cut(s) | 307 |
| BmiI | GGNNCC | 3 cut(s) | 213, 435, 541 |
| BmrI | ACTGGG | 1 cut(s) | 537 |
| BmsI | GCATC | 2 cut(s) | 192, 508 |
| BmuI | ACTGGG | 1 cut(s) | 537 |
| BpiI | GAAGAC | 1 cut(s) | 261 |
| Bpu10I | CCTNAGC | 1 cut(s) | 386 |
| BsaHI | GRCGYC | 1 cut(s) | 212 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 160, 190 |
| Bse118I | RCCGGY | 1 cut(s) | 244 |
| Bse1I | ACTGG | 2 cut(s) | 532, 605 |
| BseGI | GGATG | 2 cut(s) | 523, 651 |
| BseMII | CTCAG | 1 cut(s) | 377 |
| BseNI | ACTGG | 2 cut(s) | 532, 605 |
| BseRI | GAGGAG | 2 cut(s) | 152, 302 |
| BseX3I | CGGCCG | 1 cut(s) | 219 |
| BseYI | CCCAGC | 1 cut(s) | 188 |
| Bsh1285I | CGRYCG | 1 cut(s) | 222 |
| BshFI | GGCC | 3 cut(s) | 221, 391, 590 |
| BshNI | GGYRCC | 2 cut(s) | 211, 539 |
| BsiEI | CGRYCG | 1 cut(s) | 222 |
| BsiHKAI | GWGCWC | 1 cut(s) | 639 |
| BsiSI | CCGG | 2 cut(s) | 135, 245 |
| BslFI | GGGAC | 1 cut(s) | 544 |
| BsmAI | GTCTC | 1 cut(s) | 614 |
| BsmFI | GGGAC | 1 cut(s) | 544 |
| BsnI | GGCC | 3 cut(s) | 221, 391, 590 |
| Bsp1286I | GDGCHC | 1 cut(s) | 639 |
| BspACI | CCGC | 5 cut(s) | 121, 218, 222, 248, 392 |
| BspANI | GGCC | 3 cut(s) | 221, 391, 590 |
| BspCNI | CTCAG | 1 cut(s) | 376 |
| BspLI | GGNNCC | 3 cut(s) | 213, 435, 541 |
| BspMAI | CTGCAG | 1 cut(s) | 131 |
| BspT107I | GGYRCC | 2 cut(s) | 211, 539 |
| BspTI | CTTAAG | 1 cut(s) | 404 |
| BsrFI | RCCGGY | 1 cut(s) | 244 |
| BsrI | ACTGG | 2 cut(s) | 532, 605 |
| BssAI | RCCGGY | 1 cut(s) | 244 |
| BssNI | GRCGYC | 1 cut(s) | 212 |
| BssSI | CACGAG | 1 cut(s) | 395 |
| Bst2BI | CACGAG | 1 cut(s) | 395 |
| Bst4CI | ACNGT | 2 cut(s) | 307, 428 |
| Bst6I | CTCTTC | 1 cut(s) | 149 |
| BstACI | GRCGYC | 1 cut(s) | 212 |
| BstAFI | CTTAAG | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 1 cut(s) | 216 |
| BstDEI | CTNAG | 2 cut(s) | 363, 386 |
| BstF5I | GGATG | 2 cut(s) | 523, 651 |
| BstH2I | RGCGCY | 1 cut(s) | 215 |
| BstHHI | GCGC | 1 cut(s) | 214 |
| BstMAI | GTCTC | 1 cut(s) | 614 |
| BstMCI | CGRYCG | 1 cut(s) | 222 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 135, 211, 218, 391, 400 |
| BstSFI | CTRYAG | 1 cut(s) | 127 |
| BstV2I | GAAGAC | 1 cut(s) | 261 |
| BstZI | CGGCCG | 1 cut(s) | 219 |
| BsuRI | GGCC | 3 cut(s) | 221, 391, 590 |
| BtsCI | GGATG | 2 cut(s) | 523, 651 |
| BtsI | GCAGTG | 1 cut(s) | 258 |
| BtsIMutI | CAGTG | 3 cut(s) | 258, 287, 371 |
| Cac8I | GCNNGC | 1 cut(s) | 216 |
| CciNI | GCGGCCGC | 1 cut(s) | 219 |
| CfoI | GCGC | 1 cut(s) | 214 |
| Cfr10I | RCCGGY | 1 cut(s) | 244 |
| Cfr13I | GGNCC | 1 cut(s) | 307 |
| CseI | GACGC | 1 cut(s) | 252 |
| Csp6I | GTAC | 2 cut(s) | 540, 570 |
| CviAII | CATG | 1 cut(s) | 642 |
| CviJI | RGCY | 9 cut(s) | 38, 221, 329, 391, 403, 496, 590, 631, 658 |
| CviKI_1 | RGCY | 9 cut(s) | 38, 221, 329, 391, 403, 496, 590, 631, 658 |
| CviQI | GTAC | 2 cut(s) | 540, 570 |
| DdeI | CTNAG | 2 cut(s) | 363, 386 |
| DinI | GGCGCC | 1 cut(s) | 213 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 298 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 298 |
| EaeI | YGGCCR | 1 cut(s) | 219 |
| EagI | CGGCCG | 1 cut(s) | 219 |
| Eam1104I | CTCTTC | 1 cut(s) | 149 |
| EarI | CTCTTC | 1 cut(s) | 149 |
| EclXI | CGGCCG | 1 cut(s) | 219 |
| Eco47I | GGWCC | 1 cut(s) | 307 |
| Eco52I | CGGCCG | 1 cut(s) | 219 |
| EcoRI | GAATTC | 1 cut(s) | 295 |
| EgeI | GGCGCC | 1 cut(s) | 213 |
| EheI | GGCGCC | 1 cut(s) | 213 |
| FaeI | CATG | 1 cut(s) | 645 |
| FaiI | YATR | 7 cut(s) | 48, 227, 357, 503, 537, 553, 643 |
| FaqI | GGGAC | 1 cut(s) | 544 |
| FatI | CATG | 1 cut(s) | 641 |
| FblI | GTMKAC | 1 cut(s) | 233 |
| Fnu4HI | GCNGC | 4 cut(s) | 219, 222, 249, 392 |
| FokI | GGATG | 2 cut(s) | 530, 658 |
| Fsp4HI | GCNGC | 4 cut(s) | 219, 222, 249, 392 |
| GlaI | GCGC | 1 cut(s) | 213 |
| GluI | GCNGC | 4 cut(s) | 219, 222, 249, 392 |
| GsaI | CCCAGC | 1 cut(s) | 192 |
| HaeII | RGCGCY | 1 cut(s) | 215 |
| HaeIII | GGCC | 3 cut(s) | 221, 391, 590 |
| HapII | CCGG | 2 cut(s) | 135, 245 |
| HgaI | GACGC | 1 cut(s) | 252 |
| HhaI | GCGC | 1 cut(s) | 214 |
| Hin1I | GRCGYC | 1 cut(s) | 212 |
| Hin1II | CATG | 1 cut(s) | 645 |
| Hin6I | GCGC | 1 cut(s) | 212 |
| HinP1I | GCGC | 1 cut(s) | 212 |
| HincII | GTYRAC | 2 cut(s) | 234, 303 |
| HindII | GTYRAC | 2 cut(s) | 234, 303 |
| HindIII | AAGCTT | 2 cut(s) | 401, 656 |
| HinfI | GANTC | 1 cut(s) | 7 |
| HpaII | CCGG | 2 cut(s) | 135, 245 |
| HphI | GGTGA | 2 cut(s) | 99, 148 |
| Hpy166II | GTNNAC | 2 cut(s) | 234, 303 |
| Hpy188I | TCNGA | 2 cut(s) | 379, 598 |
| Hpy188III | TCNNGA | 3 cut(s) | 96, 557, 613 |
| Hpy8I | GTNNAC | 2 cut(s) | 234, 303 |
| Hpy99I | CGWCG | 4 cut(s) | 152, 235, 268, 598 |
| HpyAV | CCTTC | 1 cut(s) | 93 |
| HpyCH4III | ACNGT | 2 cut(s) | 307, 428 |
| HpyCH4IV | ACGT | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 135, 211, 218, 391, 400 |
| HpyF3I | CTNAG | 2 cut(s) | 363, 386 |
| HpySE526I | ACGT | 1 cut(s) | 230 |
| Hsp92I | GRCGYC | 1 cut(s) | 212 |
| Hsp92II | CATG | 1 cut(s) | 645 |
| HspAI | GCGC | 1 cut(s) | 212 |
| KasI | GGCGCC | 1 cut(s) | 211 |
| KpnI | GGTACC | 1 cut(s) | 543 |
| LmnI | GCTCC | 2 cut(s) | 35, 181 |
| LweI | GCATC | 2 cut(s) | 192, 508 |
| MaeII | ACGT | 1 cut(s) | 230 |
| MaeIII | GTNAC | 1 cut(s) | 422 |
| MboII | GAAGA | 5 cut(s) | 33, 136, 261, 361, 628 |
| MhlI | GDGCHC | 1 cut(s) | 639 |
| MluCI | AATT | 4 cut(s) | 91, 283, 295, 480 |
| Mly113I | GGCGCC | 1 cut(s) | 212 |
| MmeI | TCCRAC | 1 cut(s) | 576 |
| MseI | TTAA | 1 cut(s) | 405 |
| MspCI | CTTAAG | 1 cut(s) | 404 |
| MspI | CCGG | 2 cut(s) | 135, 245 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 135, 211, 218, 391, 400 |
| NarI | GGCGCC | 1 cut(s) | 212 |
| NlaIII | CATG | 1 cut(s) | 645 |
| NlaIV | GGNNCC | 3 cut(s) | 213, 435, 541 |
| NmuCI | GTSAC | 1 cut(s) | 422 |
| NotI | GCGGCCGC | 1 cut(s) | 219 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 236 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PkrI | GCNGC | 4 cut(s) | 220, 223, 250, 393 |
| PluTI | GGCGCC | 1 cut(s) | 215 |
| PspFI | CCCAGC | 1 cut(s) | 188 |
| PspN4I | GGNNCC | 3 cut(s) | 213, 435, 541 |
| PspPI | GGNCC | 1 cut(s) | 307 |
| PstI | CTGCAG | 1 cut(s) | 131 |
| RsaI | GTAC | 2 cut(s) | 541, 571 |
| RsaNI | GTAC | 2 cut(s) | 540, 570 |
| SalI | GTCGAC | 1 cut(s) | 232 |
| SaqAI | TTAA | 1 cut(s) | 405 |
| SatI | GCNGC | 4 cut(s) | 219, 222, 249, 392 |
| Sau96I | GGNCC | 1 cut(s) | 307 |
| SduI | GDGCHC | 1 cut(s) | 639 |
| SfaNI | GCATC | 2 cut(s) | 192, 508 |
| SfcI | CTRYAG | 1 cut(s) | 127 |
| SfoI | GGCGCC | 1 cut(s) | 213 |
| SinI | GGWCC | 1 cut(s) | 307 |
| SmlI | CTYRAG | 1 cut(s) | 404 |
| SmoI | CTYRAG | 1 cut(s) | 404 |
| Sse9I | AATT | 4 cut(s) | 91, 283, 295, 480 |
| SsiI | CCGC | 5 cut(s) | 121, 218, 222, 248, 392 |
| SspDI | GGCGCC | 1 cut(s) | 211 |
| SspI | AATATT | 1 cut(s) | 19 |
| TaaI | ACNGT | 2 cut(s) | 307, 428 |
| TaiI | ACGT | 1 cut(s) | 233 |
| TaqI | TCGA | 2 cut(s) | 233, 239 |
| TasI | AATT | 4 cut(s) | 91, 283, 295, 480 |
| TauI | GCSGC | 4 cut(s) | 221, 224, 251, 394 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| Tru1I | TTAA | 1 cut(s) | 405 |
| Tru9I | TTAA | 1 cut(s) | 405 |
| TscAI | CASTG | 3 cut(s) | 265, 294, 371 |
| TseFI | GTSAC | 1 cut(s) | 422 |
| Tsp45I | GTSAC | 1 cut(s) | 422 |
| TspDTI | ATGAA | 1 cut(s) | 362 |
| TspRI | CASTG | 3 cut(s) | 265, 294, 371 |
| Vha464I | CTTAAG | 1 cut(s) | 404 |
| VpaK11BI | GGWCC | 1 cut(s) | 307 |
| XapI | RAATTY | 1 cut(s) | 295 |
| XmiI | GTMKAC | 1 cut(s) | 233 |