Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 137, 288 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 46 |
| AluBI | AGCT | 1 cut(s) | 164 |
| AluI | AGCT | 1 cut(s) | 164 |
| Alw21I | GWGCWC | 1 cut(s) | 287 |
| Alw26I | GTCTC | 1 cut(s) | 96 |
| Alw44I | GTGCAC | 1 cut(s) | 283 |
| ApaLI | GTGCAC | 1 cut(s) | 283 |
| AspS9I | GGNCC | 1 cut(s) | 201 |
| AsuHPI | GGTGA | 2 cut(s) | 44, 242 |
| AvaII | GGWCC | 1 cut(s) | 201 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| Bbv12I | GWGCWC | 1 cut(s) | 287 |
| BbvCI | CCTCAGC | 1 cut(s) | 45 |
| BcoDI | GTCTC | 1 cut(s) | 96 |
| BisI | GCNGC | 1 cut(s) | 138 |
| BlsI | GCNGC | 1 cut(s) | 139 |
| Bme18I | GGWCC | 1 cut(s) | 201 |
| BmgT120I | GGNCC | 1 cut(s) | 201 |
| BmiI | GGNNCC | 1 cut(s) | 202 |
| Bpu10I | CCTNAGC | 1 cut(s) | 45 |
| BsaJI | CCNNGG | 1 cut(s) | 119 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 46 |
| Bse118I | RCCGGY | 1 cut(s) | 290 |
| Bse1I | ACTGG | 1 cut(s) | 250 |
| BseDI | CCNNGG | 1 cut(s) | 119 |
| BseGI | GGATG | 1 cut(s) | 223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BseMII | CTCAG | 1 cut(s) | 36 |
| BseNI | ACTGG | 1 cut(s) | 250 |
| BseRI | GAGGAG | 1 cut(s) | 278 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseYI | CCCAGC | 1 cut(s) | 82 |
| BsiHKAI | GWGCWC | 1 cut(s) | 287 |
| BsiSI | CCGG | 1 cut(s) | 291 |
| BslFI | GGGAC | 1 cut(s) | 214 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BsmAI | GTCTC | 1 cut(s) | 96 |
| BsmFI | GGGAC | 1 cut(s) | 214 |
| BsmI | GAATGC | 1 cut(s) | 41 |
| Bsp1286I | GDGCHC | 1 cut(s) | 287 |
| BspACI | CCGC | 2 cut(s) | 137, 288 |
| BspCNI | CTCAG | 1 cut(s) | 37 |
| BspHI | TCATGA | 1 cut(s) | 142 |
| BspLI | GGNNCC | 1 cut(s) | 202 |
| BsrFI | RCCGGY | 1 cut(s) | 290 |
| BsrI | ACTGG | 1 cut(s) | 250 |
| BssAI | RCCGGY | 1 cut(s) | 290 |
| BssECI | CCNNGG | 1 cut(s) | 119 |
| BssT1I | CCWWGG | 1 cut(s) | 119 |
| BstDEI | CTNAG | 2 cut(s) | 45, 226 |
| BstEII | GGTNACC | 1 cut(s) | 230 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 44 |
| BstF5I | GGATG | 1 cut(s) | 223 |
| BstMAI | GTCTC | 1 cut(s) | 96 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstPI | GGTNACC | 1 cut(s) | 230 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| BtsCI | GGATG | 1 cut(s) | 223 |
| BtsI | GCAGTG | 1 cut(s) | 15 |
| BtsIMutI | CAGTG | 1 cut(s) | 15 |
| CciI | TCATGA | 1 cut(s) | 142 |
| Cfr10I | RCCGGY | 1 cut(s) | 290 |
| Cfr13I | GGNCC | 1 cut(s) | 201 |
| CviAII | CATG | 2 cut(s) | 143, 214 |
| CviJI | RGCY | 3 cut(s) | 140, 164, 211 |
| CviKI_1 | RGCY | 3 cut(s) | 140, 164, 211 |
| DdeI | CTNAG | 2 cut(s) | 45, 226 |
| Eco130I | CCWWGG | 1 cut(s) | 119 |
| Eco47I | GGWCC | 1 cut(s) | 201 |
| Eco91I | GGTNACC | 1 cut(s) | 230 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 44 |
| EcoO109I | RGGNCCY | 1 cut(s) | 201 |
| EcoO65I | GGTNACC | 1 cut(s) | 230 |
| EcoT14I | CCWWGG | 1 cut(s) | 119 |
| ErhI | CCWWGG | 1 cut(s) | 119 |
| FaeI | CATG | 2 cut(s) | 146, 217 |
| FaiI | YATR | 4 cut(s) | 114, 144, 215, 303 |
| FaqI | GGGAC | 1 cut(s) | 214 |
| FatI | CATG | 2 cut(s) | 142, 213 |
| Fnu4HI | GCNGC | 1 cut(s) | 138 |
| FokI | GGATG | 1 cut(s) | 230 |
| Fsp4HI | GCNGC | 1 cut(s) | 138 |
| GluI | GCNGC | 1 cut(s) | 138 |
| GsaI | CCCAGC | 1 cut(s) | 86 |
| HapII | CCGG | 1 cut(s) | 291 |
| Hin1II | CATG | 2 cut(s) | 146, 217 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HinfI | GANTC | 3 cut(s) | 75, 237, 275 |
| HpaII | CCGG | 1 cut(s) | 291 |
| HphI | GGTGA | 2 cut(s) | 44, 242 |
| Hpy166II | GTNNAC | 2 cut(s) | 64, 285 |
| Hpy188III | TCNNGA | 2 cut(s) | 101, 143 |
| Hpy8I | GTNNAC | 2 cut(s) | 64, 285 |
| HpyAV | CCTTC | 1 cut(s) | 44 |
| HpyCH4V | TGCA | 1 cut(s) | 285 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 2 cut(s) | 45, 226 |
| Hsp92II | CATG | 2 cut(s) | 146, 217 |
| LpnPI | CCDG | 4 cut(s) | 68, 138, 231, 304 |
| MaeIII | GTNAC | 1 cut(s) | 230 |
| MhlI | GDGCHC | 1 cut(s) | 287 |
| MluCI | AATT | 1 cut(s) | 69 |
| MnlI | CCTC | 4 cut(s) | 40, 214, 256, 265 |
| MspI | CCGG | 1 cut(s) | 291 |
| Mva1269I | GAATGC | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NlaIII | CATG | 2 cut(s) | 146, 217 |
| NlaIV | GGNNCC | 1 cut(s) | 202 |
| NmuCI | GTSAC | 1 cut(s) | 230 |
| PagI | TCATGA | 1 cut(s) | 142 |
| PctI | GAATGC | 1 cut(s) | 41 |
| PfeI | GAWTC | 3 cut(s) | 75, 237, 275 |
| PkrI | GCNGC | 1 cut(s) | 139 |
| PpuMI | RGGWCCY | 1 cut(s) | 201 |
| Psp5II | RGGWCCY | 1 cut(s) | 201 |
| PspEI | GGTNACC | 1 cut(s) | 230 |
| PspFI | CCCAGC | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 202 |
| PspPI | GGNCC | 1 cut(s) | 201 |
| PspPPI | RGGWCCY | 1 cut(s) | 201 |
| SatI | GCNGC | 1 cut(s) | 138 |
| Sau96I | GGNCC | 1 cut(s) | 201 |
| SduI | GDGCHC | 1 cut(s) | 287 |
| SetI | ASST | 4 cut(s) | 55, 166, 206, 232 |
| SinI | GGWCC | 1 cut(s) | 201 |
| Sse9I | AATT | 1 cut(s) | 69 |
| SsiI | CCGC | 2 cut(s) | 137, 288 |
| StyI | CCWWGG | 1 cut(s) | 119 |
| TaqI | TCGA | 1 cut(s) | 100 |
| TaqII | GACCGA | 1 cut(s) | 249 |
| TasI | AATT | 1 cut(s) | 69 |
| TauI | GCSGC | 1 cut(s) | 140 |
| TfiI | GAWTC | 3 cut(s) | 75, 237, 275 |
| TscAI | CASTG | 1 cut(s) | 15 |
| TseFI | GTSAC | 1 cut(s) | 230 |
| Tsp45I | GTSAC | 1 cut(s) | 230 |
| TspDTI | ATGAA | 3 cut(s) | 98, 159, 267 |
| TspRI | CASTG | 1 cut(s) | 15 |
| VneI | GTGCAC | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 1 cut(s) | 201 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 44 |