zinc-binding in reverse transcriptase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 437 |
| AccI | GTMKAC | 1 cut(s) | 221 |
| AciI | CCGC | 1 cut(s) | 119 |
| AcsI | RAATTY | 2 cut(s) | 460, 502 |
| AdeI | CACNNNGTG | 1 cut(s) | 499 |
| AfaI | GTAC | 1 cut(s) | 693 |
| AfeI | AGCGCT | 1 cut(s) | 724 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 294, 437 |
| AgsI | TTSAA | 1 cut(s) | 596 |
| AleI | CACNNNNGTG | 1 cut(s) | 377 |
| AluBI | AGCT | 7 cut(s) | 26, 101, 184, 314, 356, 532, 792 |
| AluI | AGCT | 7 cut(s) | 26, 101, 184, 314, 356, 532, 792 |
| Alw26I | GTCTC | 1 cut(s) | 131 |
| Ama87I | CYCGRG | 1 cut(s) | 231 |
| Aor51HI | AGCGCT | 1 cut(s) | 724 |
| ApeKI | GCWGC | 4 cut(s) | 98, 353, 482, 532 |
| ApoI | RAATTY | 2 cut(s) | 460, 502 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 116, 148 |
| AspLEI | GCGC | 1 cut(s) | 725 |
| AsuHPI | GGTGA | 1 cut(s) | 511 |
| AvaI | CYCGRG | 1 cut(s) | 231 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 40, 72 |
| BbvI | GCAGC | 4 cut(s) | 110, 365, 469, 519 |
| BccI | CCATC | 3 cut(s) | 401, 757, 837 |
| BcoDI | GTCTC | 1 cut(s) | 131 |
| BfaI | CTAG | 5 cut(s) | 9, 110, 375, 608, 871 |
| BfoI | RGCGCY | 1 cut(s) | 726 |
| BglII | AGATCT | 1 cut(s) | 682 |
| BisI | GCNGC | 4 cut(s) | 99, 354, 483, 533 |
| BlsI | GCNGC | 4 cut(s) | 100, 355, 484, 534 |
| BmeT110I | CYCGRG | 1 cut(s) | 231 |
| BmiI | GGNNCC | 1 cut(s) | 321 |
| Bpu10I | CCTNAGC | 1 cut(s) | 315 |
| BpuEI | CTTGAG | 1 cut(s) | 450 |
| Bsa29I | ATCGAT | 1 cut(s) | 699 |
| BsaAI | YACGTR | 1 cut(s) | 695 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 31, 33, 61 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 294, 437 |
| BseCI | ATCGAT | 1 cut(s) | 699 |
| BseGI | GGATG | 4 cut(s) | 412, 646, 694, 779 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 294, 437 |
| BseMII | CTCAG | 1 cut(s) | 469 |
| BseRI | GAGGAG | 1 cut(s) | 642 |
| BseXI | GCAGC | 4 cut(s) | 110, 365, 469, 519 |
| BsgI | GTGCAG | 1 cut(s) | 741 |
| Bsh1285I | CGRYCG | 1 cut(s) | 228 |
| BshVI | ATCGAT | 1 cut(s) | 699 |
| BsiEI | CGRYCG | 1 cut(s) | 228 |
| BsiHKCI | CYCGRG | 1 cut(s) | 231 |
| BslFI | GGGAC | 1 cut(s) | 290 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 294, 437 |
| BsmAI | GTCTC | 1 cut(s) | 131 |
| BsmFI | GGGAC | 1 cut(s) | 290 |
| BsoBI | CYCGRG | 1 cut(s) | 231 |
| Bsp143I | GATC | 2 cut(s) | 682, 838 |
| BspACI | CCGC | 1 cut(s) | 119 |
| BspCNI | CTCAG | 1 cut(s) | 468 |
| BspDI | ATCGAT | 1 cut(s) | 699 |
| BspLI | GGNNCC | 1 cut(s) | 321 |
| BssMI | GATC | 2 cut(s) | 682, 838 |
| BssNAI | GTATAC | 1 cut(s) | 222 |
| Bst1107I | GTATAC | 1 cut(s) | 222 |
| Bst4CI | ACNGT | 5 cut(s) | 130, 226, 551, 605, 812 |
| Bst6I | CTCTTC | 1 cut(s) | 795 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 571 |
| BstBAI | YACGTR | 1 cut(s) | 695 |
| BstC8I | GCNNGC | 3 cut(s) | 28, 351, 537 |
| BstDEI | CTNAG | 3 cut(s) | 315, 455, 656 |
| BstF5I | GGATG | 4 cut(s) | 412, 646, 694, 779 |
| BstH2I | RGCGCY | 1 cut(s) | 726 |
| BstHHI | GCGC | 1 cut(s) | 725 |
| BstKTI | GATC | 2 cut(s) | 685, 841 |
| BstMAI | GTCTC | 1 cut(s) | 131 |
| BstMBI | GATC | 2 cut(s) | 682, 838 |
| BstMCI | CGRYCG | 1 cut(s) | 228 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 571 |
| BstNSI | RCATGY | 1 cut(s) | 574 |
| BstSNI | TACGTA | 1 cut(s) | 695 |
| BstV1I | GCAGC | 4 cut(s) | 110, 365, 469, 519 |
| BstX2I | RGATCY | 1 cut(s) | 682 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 379 |
| BstYI | RGATCY | 1 cut(s) | 682 |
| BstZ17I | GTATAC | 1 cut(s) | 222 |
| Bsu15I | ATCGAT | 1 cut(s) | 699 |
| BsuTUI | ATCGAT | 1 cut(s) | 699 |
| BtsCI | GGATG | 4 cut(s) | 412, 646, 694, 779 |
| BtsIMutI | CAGTG | 2 cut(s) | 126, 817 |
| Cac8I | GCNNGC | 3 cut(s) | 28, 351, 537 |
| CfoI | GCGC | 1 cut(s) | 725 |
| ClaI | ATCGAT | 1 cut(s) | 699 |
| CseI | GACGC | 1 cut(s) | 730 |
| Csp6I | GTAC | 1 cut(s) | 692 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 312, 347, 570, 605 |
| CviAII | CATG | 7 cut(s) | 168, 177, 425, 571, 745, 784, 854 |
| CviQI | GTAC | 1 cut(s) | 692 |
| DdeI | CTNAG | 3 cut(s) | 315, 455, 656 |
| DpnI | GATC | 2 cut(s) | 684, 840 |
| DpnII | GATC | 2 cut(s) | 682, 838 |
| DraI | TTTAAA | 2 cut(s) | 393, 543 |
| DraIII | CACNNNGTG | 1 cut(s) | 499 |
| Eam1104I | CTCTTC | 1 cut(s) | 795 |
| EarI | CTCTTC | 1 cut(s) | 795 |
| Eco105I | TACGTA | 1 cut(s) | 695 |
| Eco47III | AGCGCT | 1 cut(s) | 724 |
| Eco88I | CYCGRG | 1 cut(s) | 231 |
| EcoRI | GAATTC | 1 cut(s) | 460 |
| FaeI | CATG | 7 cut(s) | 171, 180, 428, 574, 748, 787, 857 |
| FaqI | GGGAC | 1 cut(s) | 290 |
| FatI | CATG | 7 cut(s) | 167, 176, 424, 570, 744, 783, 853 |
| FauNDI | CATATG | 1 cut(s) | 433 |
| FblI | GTMKAC | 1 cut(s) | 221 |
| Fnu4HI | GCNGC | 4 cut(s) | 99, 354, 483, 533 |
| FokI | GGATG | 4 cut(s) | 419, 653, 701, 766 |
| Fsp4HI | GCNGC | 4 cut(s) | 99, 354, 483, 533 |
| FspBI | CTAG | 5 cut(s) | 9, 110, 375, 608, 871 |
| GlaI | GCGC | 1 cut(s) | 724 |
| GluI | GCNGC | 4 cut(s) | 99, 354, 483, 533 |
| HaeII | RGCGCY | 1 cut(s) | 726 |
| HgaI | GACGC | 1 cut(s) | 730 |
| HhaI | GCGC | 1 cut(s) | 725 |
| Hin1II | CATG | 7 cut(s) | 171, 180, 428, 574, 748, 787, 857 |
| Hin6I | GCGC | 1 cut(s) | 723 |
| HinP1I | GCGC | 1 cut(s) | 723 |
| HincII | GTYRAC | 1 cut(s) | 216 |
| HindII | GTYRAC | 1 cut(s) | 216 |
| HinfI | GANTC | 1 cut(s) | 803 |
| HphI | GGTGA | 1 cut(s) | 511 |
| Hpy166II | GTNNAC | 3 cut(s) | 216, 222, 847 |
| Hpy188I | TCNGA | 3 cut(s) | 148, 387, 868 |
| Hpy188III | TCNNGA | 4 cut(s) | 205, 457, 686, 820 |
| Hpy8I | GTNNAC | 3 cut(s) | 216, 222, 847 |
| Hpy99I | CGWCG | 1 cut(s) | 800 |
| HpyAV | CCTTC | 1 cut(s) | 292 |
| HpyCH4III | ACNGT | 5 cut(s) | 130, 226, 551, 605, 812 |
| HpyCH4IV | ACGT | 4 cut(s) | 218, 694, 709, 717 |
| HpyCH4V | TGCA | 5 cut(s) | 98, 176, 565, 574, 758 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 571 |
| HpyF3I | CTNAG | 3 cut(s) | 315, 455, 656 |
| HpySE526I | ACGT | 4 cut(s) | 218, 694, 709, 717 |
| Hsp92II | CATG | 7 cut(s) | 171, 180, 428, 574, 748, 787, 857 |
| HspAI | GCGC | 1 cut(s) | 723 |
| Kzo9I | GATC | 2 cut(s) | 682, 838 |
| LmnI | GCTCC | 1 cut(s) | 797 |
| LpnPI | CCDG | 8 cut(s) | 12, 135, 442, 481, 521, 575, 671, 745 |
| Lsp1109I | GCAGC | 4 cut(s) | 110, 365, 469, 519 |
| MaeI | CTAG | 5 cut(s) | 9, 110, 375, 608, 871 |
| MaeII | ACGT | 4 cut(s) | 218, 694, 709, 717 |
| MaeIII | GTNAC | 1 cut(s) | 577 |
| MalI | GATC | 2 cut(s) | 684, 840 |
| MboI | GATC | 2 cut(s) | 682, 838 |
| MboII | GAAGA | 7 cut(s) | 48, 76, 193, 255, 356, 359, 812 |
| MflI | RGATCY | 1 cut(s) | 682 |
| MluCI | AATT | 6 cut(s) | 42, 141, 460, 502, 666, 775 |
| MlyI | GAGTC | 1 cut(s) | 812 |
| MnlI | CCTC | 4 cut(s) | 188, 432, 663, 667 |
| MseI | TTAA | 5 cut(s) | 210, 392, 542, 627, 678 |
| MslI | CAYNNNNRTG | 3 cut(s) | 377, 834, 852 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 571 |
| NdeI | CATATG | 1 cut(s) | 433 |
| NdeII | GATC | 2 cut(s) | 682, 838 |
| NlaIII | CATG | 7 cut(s) | 171, 180, 428, 574, 748, 787, 857 |
| NlaIV | GGNNCC | 1 cut(s) | 321 |
| NspI | RCATGY | 1 cut(s) | 574 |
| OliI | CACNNNNGTG | 1 cut(s) | 377 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 437 |
| PkrI | GCNGC | 4 cut(s) | 100, 355, 484, 534 |
| PleI | GAGTC | 1 cut(s) | 811 |
| PpsI | GAGTC | 1 cut(s) | 811 |
| Ppu21I | YACGTR | 1 cut(s) | 695 |
| PspN4I | GGNNCC | 1 cut(s) | 321 |
| PsuI | RGATCY | 1 cut(s) | 682 |
| RsaI | GTAC | 1 cut(s) | 693 |
| RsaNI | GTAC | 1 cut(s) | 692 |
| RseI | CAYNNNNRTG | 3 cut(s) | 377, 834, 852 |
| SaqAI | TTAA | 5 cut(s) | 210, 392, 542, 627, 678 |
| SatI | GCNGC | 4 cut(s) | 99, 354, 483, 533 |
| Sau3AI | GATC | 2 cut(s) | 682, 838 |
| SchI | GAGTC | 1 cut(s) | 812 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 377, 834, 852 |
| SmlI | CTYRAG | 1 cut(s) | 465 |
| SmoI | CTYRAG | 1 cut(s) | 465 |
| SnaBI | TACGTA | 1 cut(s) | 695 |
| Sse9I | AATT | 6 cut(s) | 42, 141, 460, 502, 666, 775 |
| SsiI | CCGC | 1 cut(s) | 119 |
| SspMI | CTAG | 5 cut(s) | 9, 110, 375, 608, 871 |
| TaaI | ACNGT | 5 cut(s) | 130, 226, 551, 605, 812 |
| TaiI | ACGT | 4 cut(s) | 221, 697, 712, 720 |
| TaqI | TCGA | 7 cut(s) | 186, 206, 528, 699, 765, 798, 806 |
| TasI | AATT | 6 cut(s) | 42, 141, 460, 502, 666, 775 |
| Tru1I | TTAA | 5 cut(s) | 210, 392, 542, 627, 678 |
| Tru9I | TTAA | 5 cut(s) | 210, 392, 542, 627, 678 |
| TscAI | CASTG | 2 cut(s) | 133, 817 |
| TseI | GCWGC | 4 cut(s) | 98, 353, 482, 532 |
| TspDTI | ATGAA | 6 cut(s) | 156, 255, 648, 760, 768, 839 |
| TspGWI | ACGGA | 2 cut(s) | 419, 784 |
| TspRI | CASTG | 2 cut(s) | 133, 817 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 437 |
| XapI | RAATTY | 2 cut(s) | 460, 502 |
| XceI | RCATGY | 1 cut(s) | 574 |
| XmiI | GTMKAC | 1 cut(s) | 221 |
| XspI | CTAG | 5 cut(s) | 9, 110, 375, 608, 871 |