ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 395 |
| AclWI | GGATC | 1 cut(s) | 425 |
| AcsI | RAATTY | 1 cut(s) | 385 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 42, 368 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AgsI | TTSAA | 1 cut(s) | 214 |
| AjnI | CCWGG | 1 cut(s) | 310 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 111, 143 |
| AleI | CACNNNNGTG | 1 cut(s) | 404 |
| AluBI | AGCT | 4 cut(s) | 40, 146, 239, 288 |
| AluI | AGCT | 4 cut(s) | 40, 146, 239, 288 |
| Alw26I | GTCTC | 1 cut(s) | 30 |
| AlwI | GGATC | 1 cut(s) | 425 |
| AoxI | GGCC | 1 cut(s) | 308 |
| ApeKI | GCWGC | 4 cut(s) | 233, 236, 266, 340 |
| ApoI | RAATTY | 1 cut(s) | 385 |
| AspS9I | GGNCC | 1 cut(s) | 308 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| BanI | GGYRCC | 1 cut(s) | 395 |
| BbvI | GCAGC | 4 cut(s) | 220, 248, 253, 352 |
| BccI | CCATC | 1 cut(s) | 386 |
| BciT130I | CCWGG | 1 cut(s) | 312 |
| BcoDI | GTCTC | 1 cut(s) | 30 |
| BfaI | CTAG | 1 cut(s) | 41 |
| BfmI | CTRYAG | 1 cut(s) | 234 |
| BisI | GCNGC | 4 cut(s) | 234, 237, 267, 341 |
| BlsI | GCNGC | 4 cut(s) | 235, 238, 268, 342 |
| Bme1390I | CCNGG | 1 cut(s) | 312 |
| BmgT120I | GGNCC | 1 cut(s) | 308 |
| BmiI | GGNNCC | 2 cut(s) | 185, 397 |
| BmrFI | CCNGG | 1 cut(s) | 312 |
| BmsI | GCATC | 2 cut(s) | 243, 253 |
| BpmI | CTGGAG | 1 cut(s) | 261 |
| BpuEI | CTTGAG | 1 cut(s) | 362 |
| BsaAI | YACGTR | 1 cut(s) | 61 |
| BsaWI | WCCGGW | 1 cut(s) | 217 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 42, 368 |
| BseBI | CCWGG | 1 cut(s) | 312 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 42, 368 |
| BseXI | GCAGC | 4 cut(s) | 220, 248, 253, 352 |
| BseYI | CCCAGC | 1 cut(s) | 427 |
| BsgI | GTGCAG | 1 cut(s) | 359 |
| BshFI | GGCC | 1 cut(s) | 310 |
| BshNI | GGYRCC | 1 cut(s) | 395 |
| BsiSI | CCGG | 1 cut(s) | 218 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 42, 368 |
| BsmAI | GTCTC | 1 cut(s) | 30 |
| BsnI | GGCC | 1 cut(s) | 310 |
| Bsp143I | GATC | 2 cut(s) | 363, 417 |
| BspANI | GGCC | 1 cut(s) | 310 |
| BspHI | TCATGA | 1 cut(s) | 28 |
| BspLI | GGNNCC | 2 cut(s) | 185, 397 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BspPI | GGATC | 1 cut(s) | 425 |
| BspT107I | GGYRCC | 1 cut(s) | 395 |
| BssMI | GATC | 2 cut(s) | 363, 417 |
| Bst2UI | CCWGG | 1 cut(s) | 312 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| Bst6I | CTCTTC | 1 cut(s) | 310 |
| BstBAI | YACGTR | 1 cut(s) | 61 |
| BstKTI | GATC | 2 cut(s) | 366, 420 |
| BstMAI | GTCTC | 1 cut(s) | 30 |
| BstMBI | GATC | 2 cut(s) | 363, 417 |
| BstNI | CCWGG | 1 cut(s) | 312 |
| BstSCI | CCNGG | 1 cut(s) | 310 |
| BstSFI | CTRYAG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 4 cut(s) | 220, 248, 253, 352 |
| BstX2I | RGATCY | 1 cut(s) | 417 |
| BstYI | RGATCY | 1 cut(s) | 417 |
| BsuRI | GGCC | 1 cut(s) | 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 399 |
| CciI | TCATGA | 1 cut(s) | 28 |
| Cfr13I | GGNCC | 1 cut(s) | 308 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviAII | CATG | 3 cut(s) | 29, 160, 197 |
| CviJI | RGCY | 9 cut(s) | 40, 146, 153, 239, 288, 310, 343, 358, 427 |
| CviKI_1 | RGCY | 9 cut(s) | 40, 146, 153, 239, 288, 310, 343, 358, 427 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DpnI | GATC | 2 cut(s) | 365, 419 |
| DpnII | GATC | 2 cut(s) | 363, 417 |
| Eam1104I | CTCTTC | 1 cut(s) | 310 |
| EarI | CTCTTC | 1 cut(s) | 310 |
| EcoRII | CCWGG | 1 cut(s) | 310 |
| FaeI | CATG | 3 cut(s) | 32, 163, 200 |
| FaiI | YATR | 8 cut(s) | 30, 66, 68, 161, 198, 306, 330, 332 |
| FatI | CATG | 3 cut(s) | 28, 159, 196 |
| Fnu4HI | GCNGC | 4 cut(s) | 234, 237, 267, 341 |
| Fsp4HI | GCNGC | 4 cut(s) | 234, 237, 267, 341 |
| FspBI | CTAG | 1 cut(s) | 41 |
| GluI | GCNGC | 4 cut(s) | 234, 237, 267, 341 |
| GsaI | CCCAGC | 1 cut(s) | 431 |
| GsuI | CTGGAG | 1 cut(s) | 261 |
| HaeIII | GGCC | 1 cut(s) | 310 |
| HapII | CCGG | 1 cut(s) | 218 |
| Hin1II | CATG | 3 cut(s) | 32, 163, 200 |
| HindIII | AAGCTT | 1 cut(s) | 144 |
| HinfI | GANTC | 2 cut(s) | 23, 119 |
| HpaII | CCGG | 1 cut(s) | 218 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy188I | TCNGA | 3 cut(s) | 22, 363, 443 |
| Hpy188III | TCNNGA | 3 cut(s) | 29, 352, 379 |
| HpyAV | CCTTC | 1 cut(s) | 197 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 3 cut(s) | 236, 256, 340 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92II | CATG | 3 cut(s) | 32, 163, 200 |
| Kzo9I | GATC | 2 cut(s) | 363, 417 |
| LpnPI | CCDG | 7 cut(s) | 225, 231, 263, 297, 324, 337, 413 |
| Lsp1109I | GCAGC | 4 cut(s) | 220, 248, 253, 352 |
| LweI | GCATC | 2 cut(s) | 243, 253 |
| MaeI | CTAG | 1 cut(s) | 41 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MalI | GATC | 2 cut(s) | 365, 419 |
| MboI | GATC | 2 cut(s) | 363, 417 |
| MboII | GAAGA | 2 cut(s) | 327, 421 |
| MflI | RGATCY | 1 cut(s) | 417 |
| MluCI | AATT | 5 cut(s) | 55, 84, 224, 257, 385 |
| MlyI | GAGTC | 1 cut(s) | 32 |
| MmeI | TCCRAC | 1 cut(s) | 304 |
| MnlI | CCTC | 3 cut(s) | 214, 369, 386 |
| MseI | TTAA | 2 cut(s) | 54, 83 |
| MslI | CAYNNNNRTG | 2 cut(s) | 195, 404 |
| MspA1I | CMGCKG | 1 cut(s) | 239 |
| MspI | CCGG | 1 cut(s) | 218 |
| MspR9I | CCNGG | 1 cut(s) | 312 |
| MvaI | CCWGG | 1 cut(s) | 312 |
| NdeII | GATC | 2 cut(s) | 363, 417 |
| NlaIII | CATG | 3 cut(s) | 32, 163, 200 |
| NlaIV | GGNNCC | 2 cut(s) | 185, 397 |
| OliI | CACNNNNGTG | 1 cut(s) | 404 |
| PagI | TCATGA | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 119 |
| PkrI | GCNGC | 4 cut(s) | 235, 238, 268, 342 |
| PleI | GAGTC | 1 cut(s) | 31 |
| PpsI | GAGTC | 1 cut(s) | 31 |
| Ppu21I | YACGTR | 1 cut(s) | 61 |
| Psp6I | CCWGG | 1 cut(s) | 310 |
| PspFI | CCCAGC | 1 cut(s) | 427 |
| PspGI | CCWGG | 1 cut(s) | 310 |
| PspN4I | GGNNCC | 2 cut(s) | 185, 397 |
| PspPI | GGNCC | 1 cut(s) | 308 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| PsuI | RGATCY | 1 cut(s) | 417 |
| PvuII | CAGCTG | 1 cut(s) | 239 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| RseI | CAYNNNNRTG | 2 cut(s) | 195, 404 |
| SaqAI | TTAA | 2 cut(s) | 54, 83 |
| SatI | GCNGC | 4 cut(s) | 234, 237, 267, 341 |
| Sau3AI | GATC | 2 cut(s) | 363, 417 |
| Sau96I | GGNCC | 1 cut(s) | 308 |
| SchI | GAGTC | 1 cut(s) | 32 |
| ScrFI | CCNGG | 1 cut(s) | 312 |
| SetI | ASST | 7 cut(s) | 20, 42, 63, 148, 189, 241, 290 |
| SfaNI | GCATC | 2 cut(s) | 243, 253 |
| SfcI | CTRYAG | 1 cut(s) | 234 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 195, 404 |
| SmlI | CTYRAG | 1 cut(s) | 377 |
| SmoI | CTYRAG | 1 cut(s) | 377 |
| Sse9I | AATT | 5 cut(s) | 55, 84, 224, 257, 385 |
| SspMI | CTAG | 1 cut(s) | 41 |
| StyD4I | CCNGG | 1 cut(s) | 310 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 1 cut(s) | 390 |
| TasI | AATT | 5 cut(s) | 55, 84, 224, 257, 385 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TfiI | GAWTC | 1 cut(s) | 119 |
| Tru1I | TTAA | 2 cut(s) | 54, 83 |
| Tru9I | TTAA | 2 cut(s) | 54, 83 |
| TscAI | CASTG | 1 cut(s) | 406 |
| TseI | GCWGC | 4 cut(s) | 233, 236, 266, 340 |
| TspDTI | ATGAA | 3 cut(s) | 132, 179, 398 |
| TspRI | CASTG | 1 cut(s) | 406 |
| XapI | RAATTY | 1 cut(s) | 385 |
| XspI | CTAG | 1 cut(s) | 41 |