ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 220 |
| AcsI | RAATTY | 1 cut(s) | 65 |
| AfaI | GTAC | 1 cut(s) | 87 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AgsI | TTSAA | 3 cut(s) | 38, 64, 196 |
| AjnI | CCWGG | 2 cut(s) | 233, 248 |
| AluBI | AGCT | 1 cut(s) | 79 |
| AluI | AGCT | 1 cut(s) | 79 |
| ApeKI | GCWGC | 3 cut(s) | 76, 113, 128 |
| ApoI | RAATTY | 1 cut(s) | 65 |
| AspLEI | GCGC | 1 cut(s) | 221 |
| AsuHPI | GGTGA | 1 cut(s) | 184 |
| BbvI | GCAGC | 3 cut(s) | 88, 115, 125 |
| BccI | CCATC | 1 cut(s) | 169 |
| BciT130I | CCWGG | 2 cut(s) | 235, 250 |
| BisI | GCNGC | 3 cut(s) | 77, 114, 129 |
| BlsI | GCNGC | 3 cut(s) | 78, 115, 130 |
| Bme1390I | CCNGG | 2 cut(s) | 235, 250 |
| BmrFI | CCNGG | 2 cut(s) | 235, 250 |
| BmsI | GCATC | 2 cut(s) | 100, 169 |
| BsaJI | CCNNGG | 1 cut(s) | 133 |
| BseBI | CCWGG | 2 cut(s) | 235, 250 |
| BseDI | CCNNGG | 1 cut(s) | 133 |
| BseGI | GGATG | 2 cut(s) | 115, 184 |
| BseMII | CTCAG | 1 cut(s) | 34 |
| BseXI | GCAGC | 3 cut(s) | 88, 115, 125 |
| Bsp143I | GATC | 1 cut(s) | 151 |
| BspCNI | CTCAG | 1 cut(s) | 33 |
| BssECI | CCNNGG | 1 cut(s) | 133 |
| BssMI | GATC | 1 cut(s) | 151 |
| BssT1I | CCWWGG | 1 cut(s) | 133 |
| Bst2UI | CCWGG | 2 cut(s) | 235, 250 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 110 |
| BstC8I | GCNNGC | 1 cut(s) | 223 |
| BstDEI | CTNAG | 2 cut(s) | 20, 155 |
| BstF5I | GGATG | 2 cut(s) | 115, 184 |
| BstHHI | GCGC | 1 cut(s) | 221 |
| BstKTI | GATC | 1 cut(s) | 154 |
| BstMBI | GATC | 1 cut(s) | 151 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 38, 110 |
| BstNI | CCWGG | 2 cut(s) | 235, 250 |
| BstNSI | RCATGY | 1 cut(s) | 217 |
| BstSCI | CCNGG | 2 cut(s) | 233, 248 |
| BstV1I | GCAGC | 3 cut(s) | 88, 115, 125 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 249 |
| BtsCI | GGATG | 2 cut(s) | 115, 184 |
| Cac8I | GCNNGC | 1 cut(s) | 223 |
| CfoI | GCGC | 1 cut(s) | 221 |
| CseI | GACGC | 1 cut(s) | 214 |
| CsiI | ACCWGGT | 1 cut(s) | 233 |
| Csp6I | GTAC | 1 cut(s) | 86 |
| CviAII | CATG | 3 cut(s) | 29, 56, 214 |
| CviJI | RGCY | 2 cut(s) | 47, 79 |
| CviKI_1 | RGCY | 2 cut(s) | 47, 79 |
| CviQI | GTAC | 1 cut(s) | 86 |
| DdeI | CTNAG | 2 cut(s) | 20, 155 |
| DpnI | GATC | 1 cut(s) | 153 |
| DpnII | GATC | 1 cut(s) | 151 |
| Eco130I | CCWWGG | 1 cut(s) | 133 |
| EcoRII | CCWGG | 2 cut(s) | 233, 248 |
| EcoT14I | CCWWGG | 1 cut(s) | 133 |
| ErhI | CCWWGG | 1 cut(s) | 133 |
| FaeI | CATG | 3 cut(s) | 32, 59, 217 |
| FaiI | YATR | 5 cut(s) | 8, 30, 57, 215, 244 |
| FatI | CATG | 3 cut(s) | 28, 55, 213 |
| Fnu4HI | GCNGC | 3 cut(s) | 77, 114, 129 |
| FokI | GGATG | 2 cut(s) | 122, 191 |
| Fsp4HI | GCNGC | 3 cut(s) | 77, 114, 129 |
| FspI | TGCGCA | 1 cut(s) | 220 |
| GlaI | GCGC | 1 cut(s) | 220 |
| GluI | GCNGC | 3 cut(s) | 77, 114, 129 |
| HgaI | GACGC | 1 cut(s) | 214 |
| HhaI | GCGC | 1 cut(s) | 221 |
| Hin1II | CATG | 3 cut(s) | 32, 59, 217 |
| Hin6I | GCGC | 1 cut(s) | 219 |
| HinP1I | GCGC | 1 cut(s) | 219 |
| HincII | GTYRAC | 1 cut(s) | 99 |
| HindII | GTYRAC | 1 cut(s) | 99 |
| HphI | GGTGA | 1 cut(s) | 184 |
| Hpy166II | GTNNAC | 2 cut(s) | 86, 99 |
| Hpy188I | TCNGA | 2 cut(s) | 23, 260 |
| Hpy8I | GTNNAC | 2 cut(s) | 86, 99 |
| Hpy99I | CGWCG | 1 cut(s) | 192 |
| HpyCH4IV | ACGT | 1 cut(s) | 120 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 113, 182 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 38, 110 |
| HpyF3I | CTNAG | 2 cut(s) | 20, 155 |
| HpySE526I | ACGT | 1 cut(s) | 120 |
| Hsp92II | CATG | 3 cut(s) | 32, 59, 217 |
| HspAI | GCGC | 1 cut(s) | 219 |
| Kzo9I | GATC | 1 cut(s) | 151 |
| LpnPI | CCDG | 5 cut(s) | 90, 129, 220, 235, 247 |
| Lsp1109I | GCAGC | 3 cut(s) | 88, 115, 125 |
| LweI | GCATC | 2 cut(s) | 100, 169 |
| MabI | ACCWGGT | 1 cut(s) | 233 |
| MaeII | ACGT | 1 cut(s) | 120 |
| MaeIII | GTNAC | 2 cut(s) | 201, 226 |
| MalI | GATC | 1 cut(s) | 153 |
| MboI | GATC | 1 cut(s) | 151 |
| MfeI | CAATTG | 1 cut(s) | 33 |
| MluCI | AATT | 3 cut(s) | 33, 65, 162 |
| MnlI | CCTC | 1 cut(s) | 161 |
| MspR9I | CCNGG | 2 cut(s) | 235, 250 |
| MunI | CAATTG | 1 cut(s) | 33 |
| MvaI | CCWGG | 2 cut(s) | 235, 250 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 38, 110 |
| NdeII | GATC | 1 cut(s) | 151 |
| NlaIII | CATG | 3 cut(s) | 32, 59, 217 |
| NmuCI | GTSAC | 1 cut(s) | 226 |
| NsbI | TGCGCA | 1 cut(s) | 220 |
| NspI | RCATGY | 1 cut(s) | 217 |
| PciI | ACATGT | 1 cut(s) | 213 |
| PkrI | GCNGC | 3 cut(s) | 78, 115, 130 |
| PscI | ACATGT | 1 cut(s) | 213 |
| Psp6I | CCWGG | 2 cut(s) | 233, 248 |
| PspGI | CCWGG | 2 cut(s) | 233, 248 |
| RsaI | GTAC | 1 cut(s) | 87 |
| RsaNI | GTAC | 1 cut(s) | 86 |
| SatI | GCNGC | 3 cut(s) | 77, 114, 129 |
| Sau3AI | GATC | 1 cut(s) | 151 |
| ScrFI | CCNGG | 2 cut(s) | 235, 250 |
| SetI | ASST | 4 cut(s) | 81, 91, 123, 236 |
| SexAI | ACCWGGT | 1 cut(s) | 233 |
| SfaNI | GCATC | 2 cut(s) | 100, 169 |
| Sse9I | AATT | 3 cut(s) | 33, 65, 162 |
| StyD4I | CCNGG | 2 cut(s) | 233, 248 |
| StyI | CCWWGG | 1 cut(s) | 133 |
| TaiI | ACGT | 1 cut(s) | 123 |
| TasI | AATT | 3 cut(s) | 33, 65, 162 |
| TseFI | GTSAC | 1 cut(s) | 226 |
| TseI | GCWGC | 3 cut(s) | 76, 113, 128 |
| Tsp45I | GTSAC | 1 cut(s) | 226 |
| XapI | RAATTY | 1 cut(s) | 65 |
| XceI | RCATGY | 1 cut(s) | 217 |