ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 122 |
| AciI | CCGC | 3 cut(s) | 36, 99, 139 |
| AcoI | YGGCCR | 1 cut(s) | 158 |
| AfaI | GTAC | 1 cut(s) | 170 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 32, 122, 135, 254 |
| AgsI | TTSAA | 2 cut(s) | 110, 281 |
| AjnI | CCWGG | 3 cut(s) | 31, 206, 249 |
| AluBI | AGCT | 2 cut(s) | 262, 284 |
| AluI | AGCT | 2 cut(s) | 262, 284 |
| Alw21I | GWGCWC | 2 cut(s) | 63, 226 |
| Alw26I | GTCTC | 1 cut(s) | 308 |
| AoxI | GGCC | 2 cut(s) | 158, 234 |
| AseI | ATTAAT | 1 cut(s) | 377 |
| AspS9I | GGNCC | 2 cut(s) | 211, 234 |
| AsuHPI | GGTGA | 2 cut(s) | 140, 362 |
| AvaII | GGWCC | 1 cut(s) | 211 |
| BalI | TGGCCA | 1 cut(s) | 160 |
| BanII | GRGCYC | 1 cut(s) | 130 |
| Bbv12I | GWGCWC | 2 cut(s) | 63, 226 |
| BccI | CCATC | 1 cut(s) | 222 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 45, 79 |
| BciT130I | CCWGG | 3 cut(s) | 33, 208, 251 |
| BciVI | GTATCC | 1 cut(s) | 14 |
| BcoDI | GTCTC | 1 cut(s) | 308 |
| BfaI | CTAG | 1 cut(s) | 177 |
| BfuI | GTATCC | 1 cut(s) | 14 |
| BisI | GCNGC | 2 cut(s) | 37, 99 |
| BlsI | GCNGC | 2 cut(s) | 38, 100 |
| Bme1390I | CCNGG | 3 cut(s) | 33, 208, 251 |
| Bme18I | GGWCC | 1 cut(s) | 211 |
| BmgT120I | GGNCC | 2 cut(s) | 211, 234 |
| BmiI | GGNNCC | 3 cut(s) | 127, 212, 235 |
| BmrFI | CCNGG | 3 cut(s) | 33, 208, 251 |
| BmsI | GCATC | 3 cut(s) | 57, 207, 343 |
| BsaI | GGTCTC | 1 cut(s) | 308 |
| BsaJI | CCNNGG | 6 cut(s) | 16, 31, 207, 237, 249, 298 |
| BsaWI | WCCGGW | 1 cut(s) | 306 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 32, 122, 135, 254 |
| Bse118I | RCCGGY | 2 cut(s) | 52, 135 |
| Bse1I | ACTGG | 1 cut(s) | 161 |
| BseBI | CCWGG | 3 cut(s) | 33, 208, 251 |
| BseDI | CCNNGG | 6 cut(s) | 16, 31, 207, 237, 249, 298 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 32, 122, 135, 254 |
| BseNI | ACTGG | 1 cut(s) | 161 |
| BshFI | GGCC | 2 cut(s) | 160, 236 |
| BsiHKAI | GWGCWC | 2 cut(s) | 63, 226 |
| BsiSI | CCGG | 3 cut(s) | 53, 136, 307 |
| BslFI | GGGAC | 2 cut(s) | 224, 230 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 32, 122, 135, 254 |
| BsmAI | GTCTC | 1 cut(s) | 308 |
| BsmFI | GGGAC | 2 cut(s) | 224, 230 |
| BsnI | GGCC | 2 cut(s) | 160, 236 |
| Bso31I | GGTCTC | 1 cut(s) | 308 |
| Bsp1286I | GDGCHC | 3 cut(s) | 63, 130, 226 |
| Bsp143I | GATC | 2 cut(s) | 272, 316 |
| Bsp19I | CCATGG | 2 cut(s) | 237, 298 |
| BspACI | CCGC | 3 cut(s) | 36, 99, 139 |
| BspANI | GGCC | 2 cut(s) | 160, 236 |
| BspLI | GGNNCC | 3 cut(s) | 127, 212, 235 |
| BspTNI | GGTCTC | 1 cut(s) | 308 |
| BsrFI | RCCGGY | 2 cut(s) | 52, 135 |
| BsrI | ACTGG | 1 cut(s) | 161 |
| BssAI | RCCGGY | 2 cut(s) | 52, 135 |
| BssECI | CCNNGG | 6 cut(s) | 16, 31, 207, 237, 249, 298 |
| BssMI | GATC | 2 cut(s) | 272, 316 |
| BssT1I | CCWWGG | 3 cut(s) | 16, 237, 298 |
| Bst2UI | CCWGG | 3 cut(s) | 33, 208, 251 |
| Bst6I | CTCTTC | 1 cut(s) | 182 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstDSI | CCRYGG | 2 cut(s) | 237, 298 |
| BstKTI | GATC | 2 cut(s) | 275, 319 |
| BstMAI | GTCTC | 1 cut(s) | 308 |
| BstMBI | GATC | 2 cut(s) | 272, 316 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 58, 67 |
| BstNI | CCWGG | 3 cut(s) | 33, 208, 251 |
| BstSCI | CCNGG | 3 cut(s) | 31, 206, 249 |
| BsuI | GTATCC | 1 cut(s) | 14 |
| BsuRI | GGCC | 2 cut(s) | 160, 236 |
| BtgI | CCRYGG | 2 cut(s) | 237, 298 |
| BtsI | GCAGTG | 1 cut(s) | 63 |
| BtsIMutI | CAGTG | 1 cut(s) | 63 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| Cfr10I | RCCGGY | 2 cut(s) | 52, 135 |
| Cfr13I | GGNCC | 2 cut(s) | 211, 234 |
| Csp6I | GTAC | 1 cut(s) | 169 |
| CviAII | CATG | 3 cut(s) | 238, 299, 320 |
| CviJI | RGCY | 9 cut(s) | 39, 52, 98, 128, 160, 180, 236, 262, 284 |
| CviKI_1 | RGCY | 9 cut(s) | 39, 52, 98, 128, 160, 180, 236, 262, 284 |
| CviQI | GTAC | 1 cut(s) | 169 |
| DpnI | GATC | 2 cut(s) | 274, 318 |
| DpnII | GATC | 2 cut(s) | 272, 316 |
| EaeI | YGGCCR | 1 cut(s) | 158 |
| Eam1104I | CTCTTC | 1 cut(s) | 182 |
| EarI | CTCTTC | 1 cut(s) | 182 |
| Eco130I | CCWWGG | 3 cut(s) | 16, 237, 298 |
| Eco24I | GRGCYC | 1 cut(s) | 130 |
| Eco31I | GGTCTC | 1 cut(s) | 308 |
| Eco47I | GGWCC | 1 cut(s) | 211 |
| EcoRII | CCWGG | 3 cut(s) | 31, 206, 249 |
| EcoT14I | CCWWGG | 3 cut(s) | 16, 237, 298 |
| EcoT38I | GRGCYC | 1 cut(s) | 130 |
| ErhI | CCWWGG | 3 cut(s) | 16, 237, 298 |
| FaeI | CATG | 3 cut(s) | 241, 302, 323 |
| FaiI | YATR | 7 cut(s) | 9, 42, 73, 239, 300, 321, 398 |
| FaqI | GGGAC | 2 cut(s) | 224, 230 |
| FatI | CATG | 3 cut(s) | 237, 298, 319 |
| Fnu4HI | GCNGC | 2 cut(s) | 37, 99 |
| FriOI | GRGCYC | 1 cut(s) | 130 |
| Fsp4HI | GCNGC | 2 cut(s) | 37, 99 |
| FspBI | CTAG | 1 cut(s) | 177 |
| GluI | GCNGC | 2 cut(s) | 37, 99 |
| HaeIII | GGCC | 2 cut(s) | 160, 236 |
| HapII | CCGG | 3 cut(s) | 53, 136, 307 |
| Hin1II | CATG | 3 cut(s) | 241, 302, 323 |
| HinfI | GANTC | 1 cut(s) | 145 |
| HpaII | CCGG | 3 cut(s) | 53, 136, 307 |
| HphI | GGTGA | 2 cut(s) | 140, 362 |
| Hpy166II | GTNNAC | 1 cut(s) | 47 |
| Hpy188III | TCNNGA | 1 cut(s) | 64 |
| Hpy8I | GTNNAC | 1 cut(s) | 47 |
| HpyAV | CCTTC | 1 cut(s) | 341 |
| HpyCH4IV | ACGT | 1 cut(s) | 265 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 58, 67 |
| HpySE526I | ACGT | 1 cut(s) | 265 |
| Hsp92II | CATG | 3 cut(s) | 241, 302, 323 |
| KroI | GCCGGC | 1 cut(s) | 52 |
| KroNI | GCCGGC | 1 cut(s) | 54 |
| Kzo9I | GATC | 2 cut(s) | 272, 316 |
| LmnI | GCTCC | 3 cut(s) | 125, 221, 300 |
| LweI | GCATC | 3 cut(s) | 57, 207, 343 |
| MaeI | CTAG | 1 cut(s) | 177 |
| MaeII | ACGT | 1 cut(s) | 265 |
| MaeIII | GTNAC | 1 cut(s) | 146 |
| MalI | GATC | 2 cut(s) | 274, 318 |
| MboI | GATC | 2 cut(s) | 272, 316 |
| MboII | GAAGA | 2 cut(s) | 199, 345 |
| MhlI | GDGCHC | 3 cut(s) | 63, 130, 226 |
| MlsI | TGGCCA | 1 cut(s) | 160 |
| MluCI | AATT | 1 cut(s) | 378 |
| MluNI | TGGCCA | 1 cut(s) | 160 |
| MlyI | GAGTC | 1 cut(s) | 154 |
| MnlI | CCTC | 2 cut(s) | 15, 87 |
| Mox20I | TGGCCA | 1 cut(s) | 160 |
| MroNI | GCCGGC | 1 cut(s) | 52 |
| MscI | TGGCCA | 1 cut(s) | 160 |
| MseI | TTAA | 2 cut(s) | 377, 406 |
| Msp20I | TGGCCA | 1 cut(s) | 160 |
| MspI | CCGG | 3 cut(s) | 53, 136, 307 |
| MspR9I | CCNGG | 3 cut(s) | 33, 208, 251 |
| MvaI | CCWGG | 3 cut(s) | 33, 208, 251 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 58, 67 |
| NaeI | GCCGGC | 1 cut(s) | 54 |
| NcoI | CCATGG | 2 cut(s) | 237, 298 |
| NdeII | GATC | 2 cut(s) | 272, 316 |
| NgoMIV | GCCGGC | 1 cut(s) | 52 |
| NlaIII | CATG | 3 cut(s) | 241, 302, 323 |
| NlaIV | GGNNCC | 3 cut(s) | 127, 212, 235 |
| NmuCI | GTSAC | 1 cut(s) | 146 |
| PdiI | GCCGGC | 1 cut(s) | 54 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 122 |
| PkrI | GCNGC | 2 cut(s) | 38, 100 |
| PleI | GAGTC | 1 cut(s) | 153 |
| PpsI | GAGTC | 1 cut(s) | 153 |
| PshBI | ATTAAT | 1 cut(s) | 377 |
| Psp6I | CCWGG | 3 cut(s) | 31, 206, 249 |
| PspGI | CCWGG | 3 cut(s) | 31, 206, 249 |
| PspN4I | GGNNCC | 3 cut(s) | 127, 212, 235 |
| PspPI | GGNCC | 2 cut(s) | 211, 234 |
| RsaI | GTAC | 1 cut(s) | 170 |
| RsaNI | GTAC | 1 cut(s) | 169 |
| SaqAI | TTAA | 2 cut(s) | 377, 406 |
| SatI | GCNGC | 2 cut(s) | 37, 99 |
| Sau3AI | GATC | 2 cut(s) | 272, 316 |
| Sau96I | GGNCC | 2 cut(s) | 211, 234 |
| SchI | GAGTC | 1 cut(s) | 154 |
| ScrFI | CCNGG | 3 cut(s) | 33, 208, 251 |
| SduI | GDGCHC | 3 cut(s) | 63, 130, 226 |
| SetI | ASST | 8 cut(s) | 108, 153, 255, 264, 268, 286, 352, 390 |
| SfaNI | GCATC | 3 cut(s) | 57, 207, 343 |
| SinI | GGWCC | 1 cut(s) | 211 |
| Sse9I | AATT | 1 cut(s) | 378 |
| SsiI | CCGC | 3 cut(s) | 36, 99, 139 |
| SspMI | CTAG | 1 cut(s) | 177 |
| StyD4I | CCNGG | 3 cut(s) | 31, 206, 249 |
| StyI | CCWWGG | 3 cut(s) | 16, 237, 298 |
| TaiI | ACGT | 1 cut(s) | 268 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TasI | AATT | 1 cut(s) | 378 |
| TauI | GCSGC | 2 cut(s) | 39, 101 |
| Tru1I | TTAA | 2 cut(s) | 377, 406 |
| Tru9I | TTAA | 2 cut(s) | 377, 406 |
| TscAI | CASTG | 1 cut(s) | 63 |
| TseFI | GTSAC | 1 cut(s) | 146 |
| Tsp45I | GTSAC | 1 cut(s) | 146 |
| TspRI | CASTG | 1 cut(s) | 63 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 122 |
| VpaK11BI | GGWCC | 1 cut(s) | 211 |
| VspI | ATTAAT | 1 cut(s) | 377 |
| XspI | CTAG | 1 cut(s) | 177 |