Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 310 |
| AciI | CCGC | 2 cut(s) | 45, 167 |
| AclWI | GGATC | 3 cut(s) | 164, 177, 359 |
| AcuI | CTGAAG | 2 cut(s) | 153, 399 |
| AfaI | GTAC | 1 cut(s) | 143 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 179, 274, 275 |
| AgsI | TTSAA | 5 cut(s) | 32, 85, 323, 418, 448 |
| AluBI | AGCT | 2 cut(s) | 226, 252 |
| AluI | AGCT | 2 cut(s) | 226, 252 |
| AlwI | GGATC | 3 cut(s) | 164, 177, 359 |
| Aor13HI | TCCGGA | 1 cut(s) | 310 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 3 cut(s) | 71, 113, 433 |
| AsuII | TTCGAA | 1 cut(s) | 208 |
| BamHI | GGATCC | 1 cut(s) | 169 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BccI | CCATC | 1 cut(s) | 152 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| BmiI | GGNNCC | 2 cut(s) | 171, 260 |
| BmsI | GCATC | 1 cut(s) | 245 |
| Bpu14I | TTCGAA | 1 cut(s) | 208 |
| BpuEI | CTTGAG | 1 cut(s) | 319 |
| BsaWI | WCCGGW | 1 cut(s) | 310 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 179, 274, 275 |
| Bse1I | ACTGG | 2 cut(s) | 260, 341 |
| Bse3DI | GCAATG | 2 cut(s) | 144, 442 |
| BseAI | TCCGGA | 1 cut(s) | 310 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 179, 274, 275 |
| BseMI | GCAATG | 2 cut(s) | 144, 442 |
| BseNI | ACTGG | 2 cut(s) | 260, 341 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| BsgI | GTGCAG | 1 cut(s) | 225 |
| BsiSI | CCGG | 1 cut(s) | 311 |
| BslFI | GGGAC | 1 cut(s) | 102 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 179, 274, 275 |
| BsmFI | GGGAC | 1 cut(s) | 102 |
| Bsp119I | TTCGAA | 1 cut(s) | 208 |
| Bsp13I | TCCGGA | 1 cut(s) | 310 |
| Bsp1407I | TGTACA | 1 cut(s) | 141 |
| Bsp143I | GATC | 2 cut(s) | 169, 364 |
| BspACI | CCGC | 2 cut(s) | 45, 167 |
| BspEI | TCCGGA | 1 cut(s) | 310 |
| BspLI | GGNNCC | 2 cut(s) | 171, 260 |
| BspPI | GGATC | 3 cut(s) | 164, 177, 359 |
| BspT104I | TTCGAA | 1 cut(s) | 208 |
| BsrDI | GCAATG | 2 cut(s) | 144, 442 |
| BsrGI | TGTACA | 1 cut(s) | 141 |
| BsrI | ACTGG | 2 cut(s) | 260, 341 |
| BssMI | GATC | 2 cut(s) | 169, 364 |
| Bst4CI | ACNGT | 1 cut(s) | 274 |
| Bst6I | CTCTTC | 2 cut(s) | 132, 181 |
| BstAUI | TGTACA | 1 cut(s) | 141 |
| BstBI | TTCGAA | 1 cut(s) | 208 |
| BstC8I | GCNNGC | 1 cut(s) | 433 |
| BstKTI | GATC | 2 cut(s) | 172, 367 |
| BstMBI | GATC | 2 cut(s) | 169, 364 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 161, 432 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BstX2I | RGATCY | 1 cut(s) | 169 |
| BstYI | RGATCY | 1 cut(s) | 169 |
| BtsI | GCAGTG | 1 cut(s) | 433 |
| BtsIMutI | CAGTG | 3 cut(s) | 270, 348, 433 |
| Cac8I | GCNNGC | 1 cut(s) | 433 |
| CseI | GACGC | 1 cut(s) | 335 |
| Csp6I | GTAC | 1 cut(s) | 142 |
| CviJI | RGCY | 5 cut(s) | 74, 192, 226, 252, 340 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 192, 226, 252, 340 |
| CviQI | GTAC | 1 cut(s) | 142 |
| DpnI | GATC | 2 cut(s) | 171, 366 |
| DpnII | GATC | 2 cut(s) | 169, 364 |
| DraI | TTTAAA | 1 cut(s) | 115 |
| Eam1104I | CTCTTC | 2 cut(s) | 132, 181 |
| EarI | CTCTTC | 2 cut(s) | 132, 181 |
| Eco57I | CTGAAG | 2 cut(s) | 153, 399 |
| FaiI | YATR | 2 cut(s) | 230, 375 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 210, 242 |
| FaqI | GGGAC | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 105 |
| GluI | GCNGC | 1 cut(s) | 165 |
| HapII | CCGG | 1 cut(s) | 311 |
| HgaI | GACGC | 1 cut(s) | 335 |
| HinfI | GANTC | 2 cut(s) | 177, 205 |
| HpaII | CCGG | 1 cut(s) | 311 |
| HphI | GGTGA | 3 cut(s) | 71, 113, 433 |
| Hpy188I | TCNGA | 2 cut(s) | 182, 364 |
| Hpy188III | TCNNGA | 2 cut(s) | 131, 311 |
| HpyAV | CCTTC | 3 cut(s) | 38, 272, 454 |
| HpyCH4III | ACNGT | 1 cut(s) | 274 |
| HpyCH4V | TGCA | 4 cut(s) | 94, 242, 426, 431 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 161, 432 |
| Kpn2I | TCCGGA | 1 cut(s) | 310 |
| Kzo9I | GATC | 2 cut(s) | 169, 364 |
| LmnI | GCTCC | 1 cut(s) | 233 |
| LpnPI | CCDG | 4 cut(s) | 144, 241, 324, 354 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| LweI | GCATC | 1 cut(s) | 245 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MaeIII | GTNAC | 3 cut(s) | 100, 119, 439 |
| MalI | GATC | 2 cut(s) | 171, 366 |
| MboI | GATC | 2 cut(s) | 169, 364 |
| MboII | GAAGA | 5 cut(s) | 51, 119, 195, 198, 392 |
| MflI | RGATCY | 1 cut(s) | 169 |
| MluCI | AATT | 1 cut(s) | 150 |
| MmeI | TCCRAC | 1 cut(s) | 376 |
| MnlI | CCTC | 7 cut(s) | 22, 55, 64, 135, 182, 307, 370 |
| MroI | TCCGGA | 1 cut(s) | 310 |
| MseI | TTAA | 2 cut(s) | 66, 114 |
| MspI | CCGG | 1 cut(s) | 311 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 161, 432 |
| NdeII | GATC | 2 cut(s) | 169, 364 |
| NlaIV | GGNNCC | 2 cut(s) | 171, 260 |
| NmuCI | GTSAC | 3 cut(s) | 100, 119, 439 |
| NspV | TTCGAA | 1 cut(s) | 208 |
| PfeI | GAWTC | 2 cut(s) | 177, 205 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| PspN4I | GGNNCC | 2 cut(s) | 171, 260 |
| PsuI | RGATCY | 1 cut(s) | 169 |
| RsaI | GTAC | 1 cut(s) | 143 |
| RsaNI | GTAC | 1 cut(s) | 142 |
| SaqAI | TTAA | 2 cut(s) | 66, 114 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau3AI | GATC | 2 cut(s) | 169, 364 |
| SetI | ASST | 7 cut(s) | 30, 66, 228, 254, 264, 318, 446 |
| SfaNI | GCATC | 1 cut(s) | 245 |
| SfuI | TTCGAA | 1 cut(s) | 208 |
| SmlI | CTYRAG | 1 cut(s) | 298 |
| SmoI | CTYRAG | 1 cut(s) | 298 |
| Sse9I | AATT | 1 cut(s) | 150 |
| SsiI | CCGC | 2 cut(s) | 45, 167 |
| SspMI | CTAG | 1 cut(s) | 105 |
| TaaI | ACNGT | 1 cut(s) | 274 |
| TaqI | TCGA | 1 cut(s) | 208 |
| TasI | AATT | 1 cut(s) | 150 |
| TatI | WGTACW | 1 cut(s) | 141 |
| TfiI | GAWTC | 2 cut(s) | 177, 205 |
| Tru1I | TTAA | 2 cut(s) | 66, 114 |
| Tru9I | TTAA | 2 cut(s) | 66, 114 |
| TscAI | CASTG | 3 cut(s) | 277, 348, 433 |
| TseFI | GTSAC | 3 cut(s) | 100, 119, 439 |
| TseI | GCWGC | 1 cut(s) | 164 |
| Tsp45I | GTSAC | 3 cut(s) | 100, 119, 439 |
| TspRI | CASTG | 3 cut(s) | 277, 348, 433 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 313 |
| XspI | CTAG | 1 cut(s) | 105 |