Rw7G009640

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000072
Physical Location & Seq
Reverse (-)
9005270 .. 9006307
1038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G009640.1

Sequence Viewer

Length: 846 bp
ATGGAGTTGAAGCAGATGGGTGTGAGAACTGAGTATAGTGGGGGGAATAGTGATTTAAACTTCAAAAATATCTGGAGTATTATTTGGGGGCTAGGGGTCCCTAACAAAGTCAAGCTCTTTCTTTGGAGAGCTTGCCATTCATTCCTTCCTTGTGTTGAGCGCCTGTTTACGCGCAAAATTTGTTCTCATGACGGTTGTGGTAGGTGTGGTAAGTCAGTTGAAACGGTGCTGCATAGTCTTTGGGAGTGTTTTAAAGCCCAAACGGTGTGGAAATGTATGTGGAATGAGGGGCTACATGGGAAGGTGGCCTTAAGGGCGGACCAGATCGTTCAAAGAAGTGTGGAGTGGCAATCTGAGCTTGCCAGGGTGAAGGCAGGTCATAATAATTTGCAGGTTGGACAACATGTAGGGGTTTCTGCTACTGTTCCGGAGGAATGTGTTGGGATGGGTGCAGTGATTGTGAGTGATGAAGGACGGCTGCTGGGTGCTTTATCTATTCCTTTGCATGCTTCCATTAAACCTGCTACAACTGAGGCATTAGCTTTGTGGCATGGGTTAAAGTACTGTAGAGAATTGGGATTAAGAAATGTGGCAGTTTATGGTGATGCTCTCAATGTGCTTAATGGATTGACTGTTTCTGGATGGGATCTTAGTGATATTGGAGGAGTACTAGATGCAGTTAGATTGATGATGAGAGAGTTTGATATGGTCTCTTGGAAGCATGTGAAGAAACGCTTTAACTTGGTGGCTCACAAATTGGCAAGATCTGCTTTGTCTTTGGTGCAAGCTATGTTTTGCAAAGATGTAGGGCCTCCTTGGCTCCATGATTTAATTGATGCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

281

Amino Acids

31.26

Weight (kDa)

8.8

Isoelectric Point (pI)

31.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 21 - 90 2.6e-12 zinc-binding in reverse transcriptase
RVT_3 PF13456 148 - 257 3.2e-18 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 365, 382, 529
AccII CGCG 1 cut(s) 172
AccIII TCCGGA 1 cut(s) 427
AciI CCGC 1 cut(s) 317
AclWI GGATC 1 cut(s) 654
AcsI RAATTY 1 cut(s) 177
AfaI GTAC 2 cut(s) 563, 669
AflII CTTAAG 1 cut(s) 310
AflIII ACRYGT 1 cut(s) 403
AgsI TTSAA 4 cut(s) 10, 64, 221, 332
AjnI CCWGG 1 cut(s) 362
AluBI AGCT 5 cut(s) 115, 131, 358, 542, 788
AluI AGCT 5 cut(s) 115, 131, 358, 542, 788
Alw26I GTCTC 1 cut(s) 715
AlwI GGATC 1 cut(s) 654
Aor13HI TCCGGA 1 cut(s) 427
AoxI GGCC 2 cut(s) 306, 809
ApeKI GCWGC 2 cut(s) 229, 478
ApoI RAATTY 1 cut(s) 177
AspLEI GCGC 2 cut(s) 162, 174
AspS9I GGNCC 3 cut(s) 97, 319, 809
AsuHPI GGTGA 2 cut(s) 379, 614
AvaII GGWCC 2 cut(s) 97, 319
BbvI GCAGC 2 cut(s) 216, 465
BccI CCATC 3 cut(s) 10, 439, 636
BceAI ACGGC 1 cut(s) 491
BciT130I CCWGG 1 cut(s) 364
BcoDI GTCTC 1 cut(s) 715
BfaI CTAG 2 cut(s) 92, 671
BfmI CTRYAG 1 cut(s) 565
BfoI RGCGCY 1 cut(s) 163
BfrI CTTAAG 1 cut(s) 310
BfuAI ACCTGC 3 cut(s) 365, 382, 529
BglI GCCNNNNNGGC 2 cut(s) 314, 817
BglII AGATCT 1 cut(s) 764
BisI GCNGC 2 cut(s) 230, 479
BlsI GCNGC 2 cut(s) 231, 480
BmcAI AGTACT 2 cut(s) 563, 669
Bme1390I CCNGG 1 cut(s) 364
Bme18I GGWCC 2 cut(s) 97, 319
BmgT120I GGNCC 3 cut(s) 97, 319, 809
BmiI GGNNCC 3 cut(s) 98, 99, 821
BmrFI CCNGG 1 cut(s) 364
BmsI GCATC 3 cut(s) 595, 664, 826
BpmI CTGGAG 1 cut(s) 94
BsaI GGTCTC 1 cut(s) 715
BsaJI CCNNGG 2 cut(s) 363, 815
BsaWI WCCGGW 1 cut(s) 427
BseAI TCCGGA 1 cut(s) 427
BseBI CCWGG 1 cut(s) 364
BseDI CCNNGG 2 cut(s) 363, 815
BseGI GGATG 2 cut(s) 450, 647
BseMII CTCAG 3 cut(s) 21, 345, 522
BseRI GAGGAG 1 cut(s) 678
BseXI GCAGC 2 cut(s) 216, 465
BseYI CCCAGC 1 cut(s) 481
BsgI GTGCAG 1 cut(s) 471
Bsh1236I CGCG 1 cut(s) 172
BshFI GGCC 2 cut(s) 308, 811
BsiSI CCGG 1 cut(s) 428
BslFI GGGAC 1 cut(s) 83
BsmAI GTCTC 1 cut(s) 715
BsmFI GGGAC 1 cut(s) 83
BsnI GGCC 2 cut(s) 308, 811
Bso31I GGTCTC 1 cut(s) 715
Bsp13I TCCGGA 1 cut(s) 427
Bsp143I GATC 3 cut(s) 324, 646, 764
BspACI CCGC 1 cut(s) 317
BspANI GGCC 2 cut(s) 308, 811
BspCNI CTCAG 3 cut(s) 22, 346, 523
BspEI TCCGGA 1 cut(s) 427
BspFNI CGCG 1 cut(s) 172
BspHI TCATGA 1 cut(s) 187
BspLI GGNNCC 3 cut(s) 98, 99, 821
BspMI ACCTGC 3 cut(s) 365, 382, 529
BspPI GGATC 1 cut(s) 654
BspTI CTTAAG 1 cut(s) 310
BspTNI GGTCTC 1 cut(s) 715
BssECI CCNNGG 2 cut(s) 363, 815
BssMI GATC 3 cut(s) 324, 646, 764
BssT1I CCWWGG 1 cut(s) 815
Bst2UI CCWGG 1 cut(s) 364
Bst4CI ACNGT 6 cut(s) 194, 226, 265, 424, 566, 634
BstAFI CTTAAG 1 cut(s) 310
BstAPI GCANNNNNTGC 1 cut(s) 767
BstC8I GCNNGC 4 cut(s) 133, 360, 507, 786
BstDEI CTNAG 4 cut(s) 30, 354, 531, 650
BstF5I GGATG 2 cut(s) 450, 647
BstFNI CGCG 1 cut(s) 172
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 2 cut(s) 162, 174
BstKTI GATC 3 cut(s) 327, 649, 767
BstMAI GTCTC 1 cut(s) 715
BstMBI GATC 3 cut(s) 324, 646, 764
BstMWI GCNNNNNNNGC 4 cut(s) 314, 355, 767, 817
BstNI CCWGG 1 cut(s) 364
BstNSI RCATGY 3 cut(s) 407, 509, 725
BstSCI CCNGG 1 cut(s) 362
BstSFI CTRYAG 1 cut(s) 565
BstUI CGCG 1 cut(s) 172
BstV1I GCAGC 2 cut(s) 216, 465
BstX2I RGATCY 2 cut(s) 646, 764
BstYI RGATCY 2 cut(s) 646, 764
BsuRI GGCC 2 cut(s) 308, 811
BtsCI GGATG 2 cut(s) 450, 647
BtsI GCAGTG 1 cut(s) 459
BtsIMutI CAGTG 1 cut(s) 459
BveI ACCTGC 3 cut(s) 365, 382, 529
Cac8I GCNNGC 4 cut(s) 133, 360, 507, 786
CciI TCATGA 1 cut(s) 187
CfoI GCGC 2 cut(s) 162, 174
Cfr13I GGNCC 3 cut(s) 97, 319, 809
Csp6I GTAC 2 cut(s) 562, 668
CspCI CAANNNNNGTGG 2 cut(s) 248, 283
CviAII CATG 7 cut(s) 188, 296, 404, 506, 551, 722, 824
CviQI GTAC 2 cut(s) 562, 668
DdeI CTNAG 4 cut(s) 30, 354, 531, 650
DpnI GATC 3 cut(s) 326, 648, 766
DpnII GATC 3 cut(s) 324, 646, 764
DraI TTTAAA 2 cut(s) 57, 253
EciI GGCGGA 1 cut(s) 332
Eco130I CCWWGG 1 cut(s) 815
Eco31I GGTCTC 1 cut(s) 715
Eco47I GGWCC 2 cut(s) 97, 319
EcoO109I RGGNCCY 2 cut(s) 97, 809
EcoRII CCWGG 1 cut(s) 362
EcoT14I CCWWGG 1 cut(s) 815
ErhI CCWWGG 1 cut(s) 815
FaeI CATG 7 cut(s) 191, 299, 407, 509, 554, 725, 827
FalI AAGNNNNNCTT 6 cut(s) 293, 325, 719, 751, 754, 786
FaqI GGGAC 1 cut(s) 83
FatI CATG 7 cut(s) 187, 295, 403, 505, 550, 721, 823
Fnu4HI GCNGC 2 cut(s) 230, 479
FokI GGATG 2 cut(s) 457, 654
Fsp4HI GCNGC 2 cut(s) 230, 479
FspBI CTAG 2 cut(s) 92, 671
GlaI GCGC 2 cut(s) 161, 173
GluI GCNGC 2 cut(s) 230, 479
GsaI CCCAGC 1 cut(s) 485
GsuI CTGGAG 1 cut(s) 94
HaeII RGCGCY 1 cut(s) 163
HaeIII GGCC 2 cut(s) 308, 811
HapII CCGG 1 cut(s) 428
HhaI GCGC 2 cut(s) 162, 174
Hin1II CATG 7 cut(s) 191, 299, 407, 509, 554, 725, 827
Hin6I GCGC 2 cut(s) 160, 172
HinP1I GCGC 2 cut(s) 160, 172
HpaII CCGG 1 cut(s) 428
HphI GGTGA 2 cut(s) 379, 614
Hpy166II GTNNAC 1 cut(s) 168
Hpy188I TCNGA 1 cut(s) 355
Hpy188III TCNNGA 4 cut(s) 73, 188, 428, 639
Hpy8I GTNNAC 1 cut(s) 168
HpyAV CCTTC 4 cut(s) 155, 295, 364, 464
HpyCH4III ACNGT 6 cut(s) 194, 226, 265, 424, 566, 634
HpyCH4V TGCA 7 cut(s) 232, 391, 452, 505, 677, 784, 798
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 355, 767, 817
HpyF3I CTNAG 4 cut(s) 30, 354, 531, 650
Hsp92II CATG 7 cut(s) 191, 299, 407, 509, 554, 725, 827
HspAI GCGC 2 cut(s) 160, 172
KflI GGGWCCC 1 cut(s) 97
Kpn2I TCCGGA 1 cut(s) 427
Kzo9I GATC 3 cut(s) 324, 646, 764
LmnI GCTCC 1 cut(s) 825
Lsp1109I GCAGC 2 cut(s) 216, 465
LweI GCATC 3 cut(s) 595, 664, 826
MaeI CTAG 2 cut(s) 92, 671
MalI GATC 3 cut(s) 326, 648, 766
MboI GATC 3 cut(s) 324, 646, 764
MboII GAAGA 1 cut(s) 739
MflI RGATCY 2 cut(s) 646, 764
MluCI AATT 5 cut(s) 177, 385, 572, 755, 831
MmeI TCCRAC 1 cut(s) 376
MnlI CCTC 5 cut(s) 280, 424, 526, 656, 822
MroI TCCGGA 1 cut(s) 427
MseI TTAA 9 cut(s) 56, 252, 311, 516, 557, 581, 621, 738, 830
MspCI CTTAAG 1 cut(s) 310
MspI CCGG 1 cut(s) 428
MspR9I CCNGG 1 cut(s) 364
MvaI CCWGG 1 cut(s) 364
MvnI CGCG 1 cut(s) 172
MwoI GCNNNNNNNGC 4 cut(s) 314, 355, 767, 817
NdeII GATC 3 cut(s) 324, 646, 764
NlaIII CATG 7 cut(s) 191, 299, 407, 509, 554, 725, 827
NlaIV GGNNCC 3 cut(s) 98, 99, 821
NspI RCATGY 3 cut(s) 407, 509, 725
PaeI GCATGC 1 cut(s) 509
PagI TCATGA 1 cut(s) 187
PciI ACATGT 1 cut(s) 403
PkrI GCNGC 2 cut(s) 231, 480
PpuMI RGGWCCY 1 cut(s) 97
PscI ACATGT 1 cut(s) 403
Psp5II RGGWCCY 1 cut(s) 97
Psp6I CCWGG 1 cut(s) 362
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 1 cut(s) 362
PspN4I GGNNCC 3 cut(s) 98, 99, 821
PspPI GGNCC 3 cut(s) 97, 319, 809
PspPPI RGGWCCY 1 cut(s) 97
PsuI RGATCY 2 cut(s) 646, 764
RsaI GTAC 2 cut(s) 563, 669
RsaNI GTAC 2 cut(s) 562, 668
SaqAI TTAA 9 cut(s) 56, 252, 311, 516, 557, 581, 621, 738, 830
SatI GCNGC 2 cut(s) 230, 479
Sau3AI GATC 3 cut(s) 324, 646, 764
Sau96I GGNCC 3 cut(s) 97, 319, 809
ScaI AGTACT 2 cut(s) 563, 669
ScrFI CCNGG 1 cut(s) 364
SfaNI GCATC 3 cut(s) 595, 664, 826
SfcI CTRYAG 1 cut(s) 565
SinI GGWCC 2 cut(s) 97, 319
SmlI CTYRAG 1 cut(s) 310
SmoI CTYRAG 1 cut(s) 310
SphI GCATGC 1 cut(s) 509
Sse9I AATT 5 cut(s) 177, 385, 572, 755, 831
SsiI CCGC 1 cut(s) 317
SspMI CTAG 2 cut(s) 92, 671
StyD4I CCNGG 1 cut(s) 362
StyI CCWWGG 1 cut(s) 815
TaaI ACNGT 6 cut(s) 194, 226, 265, 424, 566, 634
TasI AATT 5 cut(s) 177, 385, 572, 755, 831
TatI WGTACW 2 cut(s) 561, 667
Tru1I TTAA 9 cut(s) 56, 252, 311, 516, 557, 581, 621, 738, 830
Tru9I TTAA 9 cut(s) 56, 252, 311, 516, 557, 581, 621, 738, 830
TscAI CASTG 1 cut(s) 459
TseI GCWGC 2 cut(s) 229, 478
TspDTI ATGAA 2 cut(s) 129, 483
TspRI CASTG 1 cut(s) 459
Vha464I CTTAAG 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 97, 319
XapI RAATTY 1 cut(s) 177
XceI RCATGY 3 cut(s) 407, 509, 725
XspI CTAG 2 cut(s) 92, 671
ZrmI AGTACT 2 cut(s) 563, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.