Rmu_sc0004757.1_g000013

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004757.1
OG0000072
Physical Location & Seq
Reverse (-)
64046 .. 67134
3089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004757.1_g000013.1.cds

Sequence Viewer

Length: 1362 bp
atggagttccttcgaatccccccttctctgcaacctccaaagcactccctccattatcactccactggaacccctcacccttgggtaccccctcctgttgggagggtaaagatcaacactgatgcagcttgggattcctctttgaattctggtattgcggcaattgctcgggattcttccggaaaccttactggtggctcagctagaagcacccttgcttcttctcctctggctgcggatgctcaagctatttctcttgggctcgagctagctatctctctctccctttcttcttttcagcttgaatcagactcccttgtgctgatttcggcccttttgaacccactttcgacggtggactggactgtaattgatggggggactagatggaggatcggagatggaagaagggtgagtattgtagctgacaaatggctgccttatccggtcagtttcagggtagctaccccacttcgtgtcccagtacaacaaaaagtggaatccttgttcaatgagtctggagcatggaatgtgccactgataaagtctacattcttaccacatgaaacggagatgattctaggaatgccaatagggttaagaagtatgccggataagttggtgtggcattttactaagagcggtgaatatagtgttaaatcgggctattgggtagctcgggatttacatgctcgaaggtgtggtgcggaggcgggttcaagctccaatggaagcaaggcagtctgggggaaaatatgggctttaaatgcaccccaaaaaatcaagatgttcatgtggagagctatgcatggctttctaccttgtgccgcaagtttaaaacagaggcagattatcgaaaattcttcctgcgggttttgcagggatccatctgaatcggtattacatgtgttatgggaatgtccgaaagcgaagcagacctggaagcaaacttttttatctggagttcgtaaagtgtggcaggaaccttcttttcttgatttggtgcaacatgtgggctctacttcaacaggtgatgaatttgagaatttctgttttacggcgtggtggatatggagaaataggaatttgagtaggcatggtgaaaagacatcggagcctgttgaggtagcgagattggcattggagtggcagtatgagtacatgaagttgaatagcttgaattatgatattaaagctccaagtgccaagccacgggtcaattggcaacccccacaacaaggaaacatcaaactaaattttgatggggcttgtgattccagaaccttttttaattttcatgaactcttggagaaagtgactacaaatgtcattgtattaaggccaataacagcagagatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

453

Amino Acids

50.65

Weight (kDa)

9.08

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 85
AccB1I GGYRCC 1 cut(s) 85
AccBSI CCGCTC 1 cut(s) 642
AccI GTMKAC 1 cut(s) 548
AccIII TCCGGA 1 cut(s) 179
AciI CCGC 7 cut(s) 158, 236, 642, 707, 713, 828, 870
AclWI GGATC 3 cut(s) 401, 878, 891
AcsI RAATTY 6 cut(s) 145, 859, 1037, 1045, 1084, 1255
AdeI CACNNNGTG 1 cut(s) 476
AfaI GTAC 3 cut(s) 87, 486, 1160
AfiI CCNNNNNNNGG 3 cut(s) 98, 1212, 1238
AflIII ACRYGT 2 cut(s) 904, 1009
AgsI TTSAA 8 cut(s) 145, 305, 340, 511, 720, 1026, 1171, 1180
AjnI CCWGG 1 cut(s) 938
AloI GAACNNNNNNTCC 2 cut(s) 491, 523
AlwI GGATC 3 cut(s) 401, 878, 891
Ama87I CYCGRG 3 cut(s) 168, 263, 678
Aor13HI TCCGGA 1 cut(s) 179
AoxI GGCC 2 cut(s) 330, 1340
ApeKI GCWGC 3 cut(s) 125, 233, 436
ApoI RAATTY 6 cut(s) 145, 859, 1037, 1045, 1084, 1255
Asp718I GGTACC 1 cut(s) 85
AspS9I GGNCC 1 cut(s) 331
AsuHPI GGTGA 5 cut(s) 68, 424, 656, 1043, 1112
AsuII TTCGAA 1 cut(s) 13
AsuNHI GCTAGC 1 cut(s) 268
AvaI CYCGRG 3 cut(s) 168, 263, 678
BamHI GGATCC 1 cut(s) 883
BanI GGYRCC 1 cut(s) 85
BanII GRGCYC 2 cut(s) 264, 1019
BbvI GCAGC 3 cut(s) 137, 220, 423
BccI CCATC 5 cut(s) 368, 381, 395, 895, 1256
BceAI ACGGC 1 cut(s) 1074
BciT130I CCWGG 1 cut(s) 940
BfaI CTAG 4 cut(s) 204, 269, 384, 581
BisI GCNGC 5 cut(s) 126, 159, 234, 437, 828
BlpI GCTNAGC 1 cut(s) 199
BlsI GCNGC 5 cut(s) 127, 160, 235, 438, 829
Bme1390I CCNGG 1 cut(s) 940
BmeT110I CYCGRG 3 cut(s) 168, 263, 678
BmgT120I GGNCC 1 cut(s) 331
BmiI GGNNCC 5 cut(s) 70, 87, 885, 984, 1116
BmrFI CCNGG 1 cut(s) 940
BmrI ACTGGG 1 cut(s) 476
BmsI GCATC 2 cut(s) 112, 229
BmtI GCTAGC 1 cut(s) 272
BmuI ACTGGG 1 cut(s) 476
BpmI CTGGAG 2 cut(s) 540, 981
Bpu1102I GCTNAGC 1 cut(s) 199
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 1 cut(s) 228
BsaJI CCNNGG 2 cut(s) 80, 1211
BsaWI WCCGGW 2 cut(s) 179, 445
BsaXI ACNNNNNCTCC 2 cut(s) 1136, 1166
Bsc4I CCNNNNNNNGG 3 cut(s) 98, 1212, 1238
Bse1I ACTGG 4 cut(s) 70, 196, 365, 482
BseAI TCCGGA 1 cut(s) 179
BseBI CCWGG 1 cut(s) 940
BseDI CCNNGG 2 cut(s) 80, 1211
BseGI GGATG 1 cut(s) 244
BseLI CCNNNNNNNGG 3 cut(s) 98, 1212, 1238
BseMII CTCAG 1 cut(s) 213
BseNI ACTGG 4 cut(s) 70, 196, 365, 482
BseRI GAGGAG 1 cut(s) 216
BseXI GCAGC 3 cut(s) 137, 220, 423
BshFI GGCC 2 cut(s) 332, 1342
BshNI GGYRCC 1 cut(s) 85
BsiHKCI CYCGRG 3 cut(s) 168, 263, 678
BsiSI CCGG 3 cut(s) 180, 446, 611
BslFI GGGAC 2 cut(s) 394, 464
BslI CCNNNNNNNGG 3 cut(s) 98, 1212, 1238
BsmFI GGGAC 2 cut(s) 394, 464
BsmI GAATGC 1 cut(s) 591
BsnI GGCC 2 cut(s) 332, 1342
BsoBI CYCGRG 3 cut(s) 168, 263, 678
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 2 cut(s) 264, 1019
Bsp13I TCCGGA 1 cut(s) 179
Bsp143I GATC 3 cut(s) 111, 393, 883
Bsp1720I GCTNAGC 1 cut(s) 199
BspACI CCGC 7 cut(s) 158, 236, 642, 707, 713, 828, 870
BspANI GGCC 2 cut(s) 332, 1342
BspCNI CTCAG 1 cut(s) 212
BspEI TCCGGA 1 cut(s) 179
BspHI TCATGA 1 cut(s) 1297
BspLI GGNNCC 5 cut(s) 70, 87, 885, 984, 1116
BspOI GCTAGC 1 cut(s) 272
BspPI GGATC 3 cut(s) 401, 878, 891
BspT104I TTCGAA 1 cut(s) 13
BspT107I GGYRCC 1 cut(s) 85
BsrBI CCGCTC 1 cut(s) 642
BsrI ACTGG 4 cut(s) 70, 196, 365, 482
BssECI CCNNGG 2 cut(s) 80, 1211
BssMI GATC 3 cut(s) 111, 393, 883
BssT1I CCWWGG 1 cut(s) 80
Bst2UI CCWGG 1 cut(s) 940
Bst4CI ACNGT 2 cut(s) 355, 367
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 270
BstDEI CTNAG 2 cut(s) 199, 636
BstDSI CCRYGG 1 cut(s) 1211
BstF5I GGATG 1 cut(s) 244
BstKTI GATC 3 cut(s) 114, 396, 886
BstMBI GATC 3 cut(s) 111, 393, 883
BstMWI GCNNNNNNNGC 6 cut(s) 164, 239, 767, 876, 1136, 1202
BstNI CCWGG 1 cut(s) 940
BstNSI RCATGY 3 cut(s) 692, 908, 1013
BstSCI CCNGG 1 cut(s) 938
BstV1I GCAGC 3 cut(s) 137, 220, 423
BstX2I RGATCY 1 cut(s) 883
BstYI RGATCY 1 cut(s) 883
BsuRI GGCC 2 cut(s) 332, 1342
BtgI CCRYGG 1 cut(s) 1211
BtsCI GGATG 1 cut(s) 244
BtsIMutI CAGTG 3 cut(s) 63, 117, 536
Cac8I GCNNGC 1 cut(s) 270
CciI TCATGA 1 cut(s) 1297
Cfr13I GGNCC 1 cut(s) 331
Csp6I GTAC 3 cut(s) 86, 485, 1159
CviQI GTAC 3 cut(s) 86, 485, 1159
DdeI CTNAG 2 cut(s) 199, 636
DpnI GATC 3 cut(s) 113, 395, 885
DpnII GATC 3 cut(s) 111, 393, 883
DraI TTTAAA 2 cut(s) 765, 837
DraIII CACNNNGTG 1 cut(s) 476
Eco130I CCWWGG 1 cut(s) 80
Eco24I GRGCYC 2 cut(s) 264, 1019
Eco88I CYCGRG 3 cut(s) 168, 263, 678
EcoRI GAATTC 1 cut(s) 145
EcoRII CCWGG 1 cut(s) 938
EcoT14I CCWWGG 1 cut(s) 80
EcoT22I ATGCAT 1 cut(s) 810
EcoT38I GRGCYC 2 cut(s) 264, 1019
ErhI CCWWGG 1 cut(s) 80
FaqI GGGAC 2 cut(s) 394, 464
FauI CCCGC 2 cut(s) 706, 863
FblI GTMKAC 1 cut(s) 548
Fnu4HI GCNGC 5 cut(s) 126, 159, 234, 437, 828
FokI GGATG 1 cut(s) 251
FriOI GRGCYC 2 cut(s) 264, 1019
Fsp4HI GCNGC 5 cut(s) 126, 159, 234, 437, 828
FspBI CTAG 4 cut(s) 204, 269, 384, 581
GluI GCNGC 5 cut(s) 126, 159, 234, 437, 828
GsuI CTGGAG 2 cut(s) 540, 981
HaeIII GGCC 2 cut(s) 332, 1342
HapII CCGG 3 cut(s) 180, 446, 611
HpaII CCGG 3 cut(s) 180, 446, 611
HphI GGTGA 5 cut(s) 68, 424, 656, 1043, 1112
Hpy166II GTNNAC 2 cut(s) 358, 549
Hpy188I TCNGA 5 cut(s) 310, 398, 892, 924, 1114
Hpy188III TCNNGA 9 cut(s) 170, 180, 519, 680, 784, 960, 995, 1278, 1298
Hpy8I GTNNAC 2 cut(s) 358, 549
Hpy99I CGWCG 1 cut(s) 355
HpyAV CCTTC 5 cut(s) 20, 33, 402, 690, 996
HpyCH4III ACNGT 2 cut(s) 355, 367
HpyCH4V TGCA 6 cut(s) 31, 125, 770, 808, 879, 1006
HpyF10VI GCNNNNNNNGC 6 cut(s) 164, 239, 767, 876, 1136, 1202
HpyF3I CTNAG 2 cut(s) 199, 636
Kpn2I TCCGGA 1 cut(s) 179
KpnI GGTACC 1 cut(s) 89
Kzo9I GATC 3 cut(s) 111, 393, 883
LmnI GCTCC 4 cut(s) 521, 728, 1114, 1201
Lsp1109I GCAGC 3 cut(s) 137, 220, 423
LweI GCATC 2 cut(s) 112, 229
MaeI CTAG 4 cut(s) 204, 269, 384, 581
MaeIII GTNAC 1 cut(s) 1315
MalI GATC 3 cut(s) 113, 395, 885
MbiI CCGCTC 1 cut(s) 642
MboI GATC 3 cut(s) 111, 393, 883
MboII GAAGA 5 cut(s) 168, 213, 282, 417, 855
MfeI CAATTG 2 cut(s) 162, 1219
MflI RGATCY 1 cut(s) 883
MhlI GDGCHC 2 cut(s) 264, 1019
MlyI GAGTC 2 cut(s) 305, 524
Mph1103I ATGCAT 1 cut(s) 810
MroI TCCGGA 1 cut(s) 179
MseI TTAA 7 cut(s) 599, 657, 764, 836, 1191, 1290, 1337
MslI CAYNNNNRTG 1 cut(s) 1144
MspI CCGG 3 cut(s) 180, 446, 611
MspR9I CCNGG 1 cut(s) 940
MunI CAATTG 2 cut(s) 162, 1219
Mva1269I GAATGC 1 cut(s) 591
MvaI CCWGG 1 cut(s) 940
MwoI GCNNNNNNNGC 6 cut(s) 164, 239, 767, 876, 1136, 1202
NdeII GATC 3 cut(s) 111, 393, 883
NheI GCTAGC 1 cut(s) 268
NlaIV GGNNCC 5 cut(s) 70, 87, 885, 984, 1116
NmuCI GTSAC 1 cut(s) 1315
NsiI ATGCAT 1 cut(s) 810
NspI RCATGY 3 cut(s) 692, 908, 1013
NspV TTCGAA 1 cut(s) 13
PaeR7I CTCGAG 1 cut(s) 263
PagI TCATGA 1 cut(s) 1297
PciI ACATGT 2 cut(s) 904, 1009
PctI GAATGC 1 cut(s) 591
PfeI GAWTC 8 cut(s) 15, 134, 173, 305, 500, 577, 893, 1274
PkrI GCNGC 5 cut(s) 127, 160, 235, 438, 829
PleI GAGTC 2 cut(s) 305, 523
PpsI GAGTC 2 cut(s) 305, 523
PscI ACATGT 2 cut(s) 904, 1009
Psp6I CCWGG 1 cut(s) 938
PspGI CCWGG 1 cut(s) 938
PspN4I GGNNCC 5 cut(s) 70, 87, 885, 984, 1116
PspPI GGNCC 1 cut(s) 331
PspXI VCTCGAGB 1 cut(s) 263
PsuI RGATCY 1 cut(s) 883
RsaI GTAC 3 cut(s) 87, 486, 1160
RsaNI GTAC 3 cut(s) 86, 485, 1159
RseI CAYNNNNRTG 1 cut(s) 1144
SaqAI TTAA 7 cut(s) 599, 657, 764, 836, 1191, 1290, 1337
SatI GCNGC 5 cut(s) 126, 159, 234, 437, 828
Sau3AI GATC 3 cut(s) 111, 393, 883
Sau96I GGNCC 1 cut(s) 331
SchI GAGTC 2 cut(s) 305, 524
ScrFI CCNGG 1 cut(s) 940
SduI GDGCHC 2 cut(s) 264, 1019
SfaNI GCATC 2 cut(s) 112, 229
Sfr274I CTCGAG 1 cut(s) 263
SfuI TTCGAA 1 cut(s) 13
SlaI CTCGAG 1 cut(s) 263
SmiMI CAYNNNNRTG 1 cut(s) 1144
SmlI CTYRAG 2 cut(s) 243, 263
SmoI CTYRAG 2 cut(s) 243, 263
SsiI CCGC 7 cut(s) 158, 236, 642, 707, 713, 828, 870
SspMI CTAG 4 cut(s) 204, 269, 384, 581
StyD4I CCNGG 1 cut(s) 938
StyI CCWWGG 1 cut(s) 80
TaaI ACNGT 2 cut(s) 355, 367
TaqI TCGA 5 cut(s) 13, 264, 350, 694, 855
TatI WGTACW 2 cut(s) 484, 1158
TauI GCSGC 2 cut(s) 161, 830
TfiI GAWTC 8 cut(s) 15, 134, 173, 305, 500, 577, 893, 1274
Tru1I TTAA 7 cut(s) 599, 657, 764, 836, 1191, 1290, 1337
Tru9I TTAA 7 cut(s) 599, 657, 764, 836, 1191, 1290, 1337
TscAI CASTG 3 cut(s) 70, 124, 543
TseFI GTSAC 1 cut(s) 1315
TseI GCWGC 3 cut(s) 125, 233, 436
Tsp45I GTSAC 1 cut(s) 1315
TspDTI ATGAA 6 cut(s) 579, 781, 1050, 1178, 1286, 1314
TspGWI ACGGA 1 cut(s) 584
TspRI CASTG 3 cut(s) 70, 124, 543
XapI RAATTY 6 cut(s) 145, 859, 1037, 1045, 1084, 1255
XceI RCATGY 3 cut(s) 692, 908, 1013
XcmI CCANNNNNNNNNTGG 1 cut(s) 1218
XhoI CTCGAG 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 548
XspI CTAG 4 cut(s) 204, 269, 384, 581
Zsp2I ATGCAT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.