FvH4_1g24221

ribonuclease H protein At1g65750-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000072
Physical Location & Seq
Forward (+)
16094142 .. 16096602
2461 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g24221.t1

Sequence Viewer

Length: 1089 bp
ATGACACCTATGGGAAACCATATGGGAAAGATTGGTTGGAGGTTGGTTTGTGATGAGTCTTCCCTGGTGAGCAAAATGCTTAAAGCGAAAGAGTCAAGGAAGCTAGTTTGGGGTTTAGGGAATAAAGCTTTGGTTGCTAAAATTGGTTGGAGGTTGGTTTGTGATGAGTCTTCCCTGGTGAGCAAAATGCTTAAAGCGAAATATTTTCGCAATGAGTCATTCCTTGAAGCTGAAATCGGTAAAAACCCTTCTAGTATCTGGAGAGCAGTGGACCCTTGGGTTCTGGGGATTTCAGAATTCAAAGTCATTTGGAACATTGGTTCTGATTGGAATATGTGTGTAGCTGATCTTATTACAAAGTCAGGATGTTGGAATATGGAGCGGTTGGAGCAGTCACTTCTTATGAAGATGTTCGAAGGGGTTCCTACTGTGTATGGCGACATTATATCAGCGCGGTGTTGGAGAAAGCGAGCTTTATGTCAAAGTTGGATCCGGGGCTATGTTGAGAGAGATGGTTATGGTAGTTTGGTAATGGCTATGAGGGATAGAGTCATGAGTAGATTAAGACCTTGTGCTGCAAAACTAGTTGCTGTTATTACTAGATTGGAGGTTGTTATTCAAGGAGGACGGCATGTTGATAATGTTGAAACGGACTGCCTGGAGGCAGTGAGATTAGTGAATGGGGAGATGGATTGCTTTGCTGAAGAGGGTGTGTTAGTCAGGAAGAGGTTGTGCCCGATTGTGCTCATGGATGTCATCATTGGTGATAGACCCATGACTAGTTCTAGTAGAAGGGAAGAGAGTGAGGATGATTGTTCCACCACCGATATTTACCATGGTTTTATCCAGGCCCAGACCATGGGCTCAAGAAAGCATAAGACCCAATGCCTAAACCTAGTTGGCCCAAGGTCTAAAGGCGCTACGCTGCTGTCATGCCATCCCTCGTCGTTGCTACTGCCCTCGAAATCAATTACACTAGAGAAGGAGTCGTCAACCTCCAGACCACCATTATCTTGTCCATCGGACCCAACAACCAAATCGGGGCCGTTGATGTCGAAAACACCAACAAACCAACACTACGCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3

Protein Analysis

363

Amino Acids

40.57

Weight (kDa)

9.09

Isoelectric Point (pI)

45.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 859
AccBSI CCGCTC 1 cut(s) 382
AccII CGCG 1 cut(s) 454
AciI CCGC 2 cut(s) 382, 454
AclWI GGATC 2 cut(s) 484, 497
AcsI RAATTY 1 cut(s) 296
AcuI CTGAAG 1 cut(s) 723
AfiI CCNNNNNNNGG 2 cut(s) 859, 1041
AgsI TTSAA 4 cut(s) 227, 301, 620, 647
AhlI ACTAGT 2 cut(s) 583, 779
AjnI CCWGG 4 cut(s) 63, 174, 657, 846
AjuI GAANNNNNNNTTGG 4 cut(s) 19, 51, 113, 145
AloI GAACNNNNNNTCC 2 cut(s) 304, 336
AluBI AGCT 5 cut(s) 103, 128, 230, 344, 473
AluI AGCT 5 cut(s) 103, 128, 230, 344, 473
Alw21I GWGCWC 1 cut(s) 747
AlwI GGATC 2 cut(s) 484, 497
AoxI GGCC 3 cut(s) 849, 901, 1043
ApeKI GCWGC 2 cut(s) 575, 925
ApoI RAATTY 1 cut(s) 296
Asp700I GAANNNNTTC 2 cut(s) 410, 420
AspLEI GCGC 2 cut(s) 454, 920
AspS9I GGNCC 5 cut(s) 271, 850, 902, 1024, 1043
AsuC2I CCSGG 1 cut(s) 494
AsuHPI GGTGA 3 cut(s) 79, 190, 776
AsuII TTCGAA 1 cut(s) 414
AvaII GGWCC 2 cut(s) 271, 1024
BaeGI GKGCMC 1 cut(s) 737
BamHI GGATCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 866
BarI GAAGNNNNNNTAC 2 cut(s) 232, 264
BbsI GAAGAC 2 cut(s) 51, 162
Bbv12I GWGCWC 1 cut(s) 747
BbvI GCAGC 2 cut(s) 562, 912
BccI CCATC 4 cut(s) 506, 682, 945, 1027
BceAI ACGGC 2 cut(s) 644, 1030
BciT130I CCWGG 4 cut(s) 65, 176, 659, 848
BcnI CCSGG 1 cut(s) 494
BcuI ACTAGT 2 cut(s) 583, 779
BfaI CTAG 8 cut(s) 104, 252, 584, 600, 780, 786, 896, 977
BfoI RGCGCY 1 cut(s) 921
BisI GCNGC 2 cut(s) 576, 926
BlsI GCNGC 2 cut(s) 577, 927
Bme1390I CCNGG 5 cut(s) 65, 176, 494, 659, 848
Bme18I GGWCC 2 cut(s) 271, 1024
BmgT120I GGNCC 5 cut(s) 271, 850, 902, 1024, 1043
BmiI GGNNCC 5 cut(s) 273, 423, 491, 1026, 1044
BmrFI CCNGG 5 cut(s) 65, 176, 494, 659, 848
BpiI GAAGAC 2 cut(s) 51, 162
BpmI CTGGAG 3 cut(s) 280, 680, 982
Bpu14I TTCGAA 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 850
BpuMI CCSGG 1 cut(s) 494
BsaJI CCNNGG 7 cut(s) 63, 174, 275, 493, 835, 858, 905
Bsc4I CCNNNNNNNGG 2 cut(s) 859, 1041
Bse3DI GCAATG 1 cut(s) 217
BseBI CCWGG 4 cut(s) 65, 176, 659, 848
BseDI CCNNGG 7 cut(s) 63, 174, 275, 493, 835, 858, 905
BseGI GGATG 4 cut(s) 371, 757, 814, 937
BseLI CCNNNNNNNGG 2 cut(s) 859, 1041
BseMI GCAATG 1 cut(s) 217
BseSI GKGCMC 1 cut(s) 737
BseXI GCAGC 2 cut(s) 562, 912
Bsh1236I CGCG 1 cut(s) 454
BshFI GGCC 3 cut(s) 851, 903, 1045
BsiHKAI GWGCWC 1 cut(s) 747
BsiSI CCGG 1 cut(s) 493
BslI CCNNNNNNNGG 2 cut(s) 859, 1041
BsnI GGCC 3 cut(s) 851, 903, 1045
Bsp119I TTCGAA 1 cut(s) 414
Bsp1286I GDGCHC 3 cut(s) 737, 747, 866
Bsp143I GATC 2 cut(s) 346, 489
Bsp19I CCATGG 2 cut(s) 835, 858
BspACI CCGC 2 cut(s) 382, 454
BspANI GGCC 3 cut(s) 851, 903, 1045
BspFNI CGCG 1 cut(s) 454
BspHI TCATGA 1 cut(s) 552
BspLI GGNNCC 5 cut(s) 273, 423, 491, 1026, 1044
BspPI GGATC 2 cut(s) 484, 497
BspT104I TTCGAA 1 cut(s) 414
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 217
BssECI CCNNGG 7 cut(s) 63, 174, 275, 493, 835, 858, 905
BssMI GATC 2 cut(s) 346, 489
BssT1I CCWWGG 4 cut(s) 275, 835, 858, 905
Bst2UI CCWGG 4 cut(s) 65, 176, 659, 848
Bst4CI ACNGT 1 cut(s) 430
Bst6I CTCTTC 3 cut(s) 699, 719, 792
BstBI TTCGAA 1 cut(s) 414
BstC8I GCNNGC 1 cut(s) 471
BstDSI CCRYGG 2 cut(s) 835, 858
BstF5I GGATG 4 cut(s) 371, 757, 814, 937
BstFNI CGCG 1 cut(s) 454
BstH2I RGCGCY 1 cut(s) 921
BstHHI GCGC 2 cut(s) 454, 920
BstKTI GATC 2 cut(s) 349, 492
BstMBI GATC 2 cut(s) 346, 489
BstMWI GCNNNNNNNGC 2 cut(s) 134, 388
BstNI CCWGG 4 cut(s) 65, 176, 659, 848
BstNSI RCATGY 1 cut(s) 635
BstSCI CCNGG 5 cut(s) 63, 174, 492, 657, 846
BstSLI GKGCMC 1 cut(s) 737
BstUI CGCG 1 cut(s) 454
BstV1I GCAGC 2 cut(s) 562, 912
BstV2I GAAGAC 2 cut(s) 51, 162
BstX2I RGATCY 1 cut(s) 489
BstYI RGATCY 1 cut(s) 489
BsuRI GGCC 3 cut(s) 851, 903, 1045
BtgI CCRYGG 2 cut(s) 835, 858
BtsCI GGATG 4 cut(s) 371, 757, 814, 937
BtsI GCAGTG 2 cut(s) 273, 672
BtsIMutI CAGTG 2 cut(s) 273, 672
Cac8I GCNNGC 1 cut(s) 471
CciI TCATGA 1 cut(s) 552
CfoI GCGC 2 cut(s) 454, 920
Cfr13I GGNCC 5 cut(s) 271, 850, 902, 1024, 1043
CviAII CATG 7 cut(s) 553, 632, 748, 775, 836, 859, 933
DpnI GATC 2 cut(s) 348, 491
DpnII GATC 2 cut(s) 346, 489
Eam1104I CTCTTC 3 cut(s) 699, 719, 792
EarI CTCTTC 3 cut(s) 699, 719, 792
Eco130I CCWWGG 4 cut(s) 275, 835, 858, 905
Eco24I GRGCYC 1 cut(s) 866
Eco47I GGWCC 2 cut(s) 271, 1024
Eco57I CTGAAG 1 cut(s) 723
EcoRI GAATTC 1 cut(s) 296
EcoRII CCWGG 4 cut(s) 63, 174, 657, 846
EcoT14I CCWWGG 4 cut(s) 275, 835, 858, 905
EcoT38I GRGCYC 1 cut(s) 866
ErhI CCWWGG 4 cut(s) 275, 835, 858, 905
FaeI CATG 7 cut(s) 556, 635, 751, 778, 839, 862, 936
FatI CATG 7 cut(s) 552, 631, 747, 774, 835, 858, 932
FauNDI CATATG 1 cut(s) 21
Fnu4HI GCNGC 2 cut(s) 576, 926
FokI GGATG 4 cut(s) 378, 764, 821, 924
FriOI GRGCYC 1 cut(s) 866
Fsp4HI GCNGC 2 cut(s) 576, 926
FspBI CTAG 8 cut(s) 104, 252, 584, 600, 780, 786, 896, 977
GlaI GCGC 2 cut(s) 453, 919
GluI GCNGC 2 cut(s) 576, 926
GsuI CTGGAG 3 cut(s) 280, 680, 982
HaeII RGCGCY 1 cut(s) 921
HaeIII GGCC 3 cut(s) 851, 903, 1045
HapII CCGG 1 cut(s) 493
HhaI GCGC 2 cut(s) 454, 920
Hin1II CATG 7 cut(s) 556, 635, 751, 778, 839, 862, 936
Hin6I GCGC 2 cut(s) 452, 918
HinP1I GCGC 2 cut(s) 452, 918
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HindIII AAGCTT 1 cut(s) 126
HinfI GANTC 6 cut(s) 56, 92, 167, 215, 549, 986
HpaII CCGG 1 cut(s) 493
HphI GGTGA 3 cut(s) 79, 190, 776
Hpy166II GTNNAC 2 cut(s) 271, 993
Hpy188I TCNGA 3 cut(s) 295, 325, 1024
Hpy188III TCNNGA 6 cut(s) 259, 363, 553, 721, 867, 999
Hpy8I GTNNAC 2 cut(s) 271, 993
Hpy99I CGWCG 1 cut(s) 949
HpyAV CCTTC 4 cut(s) 258, 410, 786, 976
HpyCH4III ACNGT 1 cut(s) 430
HpyCH4V TGCA 1 cut(s) 578
HpyF10VI GCNNNNNNNGC 2 cut(s) 134, 388
Hsp92II CATG 7 cut(s) 556, 635, 751, 778, 839, 862, 936
HspAI GCGC 2 cut(s) 452, 918
Kzo9I GATC 2 cut(s) 346, 489
LmnI GCTCC 2 cut(s) 379, 388
Lsp1109I GCAGC 2 cut(s) 562, 912
MaeI CTAG 8 cut(s) 104, 252, 584, 600, 780, 786, 896, 977
MaeIII GTNAC 1 cut(s) 393
MalI GATC 2 cut(s) 348, 491
MbiI CCGCTC 1 cut(s) 382
MboI GATC 2 cut(s) 346, 489
MboII GAAGA 6 cut(s) 51, 162, 418, 716, 736, 809
MflI RGATCY 1 cut(s) 489
MhlI GDGCHC 3 cut(s) 737, 747, 866
MluCI AATT 3 cut(s) 141, 296, 969
MlyI GAGTC 6 cut(s) 65, 101, 176, 224, 558, 995
MmeI TCCRAC 6 cut(s) 17, 128, 350, 366, 440, 467
MroXI GAANNNNTTC 2 cut(s) 410, 420
MseI TTAA 3 cut(s) 81, 192, 563
MspI CCGG 1 cut(s) 493
MspR9I CCNGG 5 cut(s) 65, 176, 494, 659, 848
MvaI CCWGG 4 cut(s) 65, 176, 659, 848
MvnI CGCG 1 cut(s) 454
MwoI GCNNNNNNNGC 2 cut(s) 134, 388
NciI CCSGG 1 cut(s) 494
NcoI CCATGG 2 cut(s) 835, 858
NdeI CATATG 1 cut(s) 21
NdeII GATC 2 cut(s) 346, 489
NlaIII CATG 7 cut(s) 556, 635, 751, 778, 839, 862, 936
NlaIV GGNNCC 5 cut(s) 273, 423, 491, 1026, 1044
NmuCI GTSAC 1 cut(s) 393
NspI RCATGY 1 cut(s) 635
NspV TTCGAA 1 cut(s) 414
PagI TCATGA 1 cut(s) 552
PdmI GAANNNNTTC 2 cut(s) 410, 420
PflMI CCANNNNNTGG 1 cut(s) 859
PkrI GCNGC 2 cut(s) 577, 927
PleI GAGTC 6 cut(s) 64, 100, 175, 223, 557, 994
PpsI GAGTC 6 cut(s) 64, 100, 175, 223, 557, 994
Psp6I CCWGG 4 cut(s) 63, 174, 657, 846
PspGI CCWGG 4 cut(s) 63, 174, 657, 846
PspN4I GGNNCC 5 cut(s) 273, 423, 491, 1026, 1044
PspPI GGNCC 5 cut(s) 271, 850, 902, 1024, 1043
PsuI RGATCY 1 cut(s) 489
SaqAI TTAA 3 cut(s) 81, 192, 563
SatI GCNGC 2 cut(s) 576, 926
Sau3AI GATC 2 cut(s) 346, 489
Sau96I GGNCC 5 cut(s) 271, 850, 902, 1024, 1043
SchI GAGTC 6 cut(s) 65, 101, 176, 224, 558, 995
ScrFI CCNGG 5 cut(s) 65, 176, 494, 659, 848
SduI GDGCHC 3 cut(s) 737, 747, 866
SfuI TTCGAA 1 cut(s) 414
SinI GGWCC 2 cut(s) 271, 1024
SmlI CTYRAG 1 cut(s) 865
SmoI CTYRAG 1 cut(s) 865
SpeI ACTAGT 2 cut(s) 583, 779
Sse9I AATT 3 cut(s) 141, 296, 969
SsiI CCGC 2 cut(s) 382, 454
SspI AATATT 1 cut(s) 203
SspMI CTAG 8 cut(s) 104, 252, 584, 600, 780, 786, 896, 977
StyD4I CCNGG 5 cut(s) 63, 174, 492, 657, 846
StyI CCWWGG 4 cut(s) 275, 835, 858, 905
TaaI ACNGT 1 cut(s) 430
TaqI TCGA 3 cut(s) 414, 962, 1055
TasI AATT 3 cut(s) 141, 296, 969
Tru1I TTAA 3 cut(s) 81, 192, 563
Tru9I TTAA 3 cut(s) 81, 192, 563
TscAI CASTG 2 cut(s) 273, 672
TseFI GTSAC 1 cut(s) 393
TseI GCWGC 2 cut(s) 575, 925
Tsp45I GTSAC 1 cut(s) 393
TspDTI ATGAA 1 cut(s) 419
TspGWI ACGGA 1 cut(s) 665
TspRI CASTG 2 cut(s) 273, 672
Van91I CCANNNNNTGG 1 cut(s) 859
VpaK11BI GGWCC 2 cut(s) 271, 1024
XapI RAATTY 1 cut(s) 296
XceI RCATGY 1 cut(s) 635
XmnI GAANNNNTTC 2 cut(s) 410, 420
XspI CTAG 8 cut(s) 104, 252, 584, 600, 780, 786, 896, 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.