ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 83 |
| AccII | CGCG | 1 cut(s) | 173 |
| AciI | CCGC | 1 cut(s) | 441 |
| AcsI | RAATTY | 2 cut(s) | 207, 491 |
| AcyI | GRCGYC | 1 cut(s) | 312 |
| AfaI | GTAC | 2 cut(s) | 144, 552 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 71, 92, 222, 440 |
| AgsI | TTSAA | 3 cut(s) | 212, 342, 542 |
| AjnI | CCWGG | 1 cut(s) | 500 |
| AluBI | AGCT | 3 cut(s) | 62, 241, 545 |
| AluI | AGCT | 3 cut(s) | 62, 241, 545 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AoxI | GGCC | 2 cut(s) | 80, 259 |
| ApeKI | GCWGC | 1 cut(s) | 293 |
| ApoI | RAATTY | 2 cut(s) | 207, 491 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 96, 128 |
| AspS9I | GGNCC | 1 cut(s) | 259 |
| AsuHPI | GGTGA | 1 cut(s) | 397 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 534, 566 |
| BbvI | GCAGC | 1 cut(s) | 280 |
| BccI | CCATC | 1 cut(s) | 110 |
| BciT130I | CCWGG | 1 cut(s) | 502 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BfaI | CTAG | 3 cut(s) | 51, 228, 302 |
| BfuAI | ACCTGC | 1 cut(s) | 83 |
| BisI | GCNGC | 1 cut(s) | 294 |
| BlsI | GCNGC | 1 cut(s) | 295 |
| Bme1390I | CCNGG | 1 cut(s) | 502 |
| BmgT120I | GGNCC | 1 cut(s) | 259 |
| BmrFI | CCNGG | 1 cut(s) | 502 |
| BmsI | GCATC | 1 cut(s) | 428 |
| BpmI | CTGGAG | 2 cut(s) | 97, 153 |
| BpuEI | CTTGAG | 1 cut(s) | 42 |
| BsaHI | GRCGYC | 1 cut(s) | 312 |
| BsaJI | CCNNGG | 1 cut(s) | 37 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 126, 156 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 71, 92, 222, 440 |
| Bse1I | ACTGG | 2 cut(s) | 216, 431 |
| BseBI | CCWGG | 1 cut(s) | 502 |
| BseDI | CCNNGG | 1 cut(s) | 37 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 71, 92, 222, 440 |
| BseMII | CTCAG | 1 cut(s) | 482 |
| BseNI | ACTGG | 2 cut(s) | 216, 431 |
| BseRI | GAGGAG | 2 cut(s) | 362, 395 |
| BseXI | GCAGC | 1 cut(s) | 280 |
| Bsh1236I | CGCG | 1 cut(s) | 173 |
| BshFI | GGCC | 2 cut(s) | 82, 261 |
| BsiWI | CGTACG | 1 cut(s) | 142 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 71, 92, 222, 440 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsnI | GGCC | 2 cut(s) | 82, 261 |
| Bsp143I | GATC | 1 cut(s) | 367 |
| Bsp19I | CCATGG | 1 cut(s) | 37 |
| BspACI | CCGC | 1 cut(s) | 441 |
| BspANI | GGCC | 2 cut(s) | 82, 261 |
| BspCNI | CTCAG | 1 cut(s) | 481 |
| BspFNI | CGCG | 1 cut(s) | 173 |
| BspMI | ACCTGC | 1 cut(s) | 83 |
| BsrI | ACTGG | 2 cut(s) | 216, 431 |
| BssECI | CCNNGG | 1 cut(s) | 37 |
| BssMI | GATC | 1 cut(s) | 367 |
| BssNI | GRCGYC | 1 cut(s) | 312 |
| BssT1I | CCWWGG | 1 cut(s) | 37 |
| Bst2UI | CCWGG | 1 cut(s) | 502 |
| BstACI | GRCGYC | 1 cut(s) | 312 |
| BstC8I | GCNNGC | 1 cut(s) | 263 |
| BstDEI | CTNAG | 1 cut(s) | 468 |
| BstDSI | CCRYGG | 1 cut(s) | 37 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 69 |
| BstFNI | CGCG | 1 cut(s) | 173 |
| BstKTI | GATC | 1 cut(s) | 370 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| BstMBI | GATC | 1 cut(s) | 367 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 238, 473, 535 |
| BstNI | CCWGG | 1 cut(s) | 502 |
| BstNSI | RCATGY | 1 cut(s) | 198 |
| BstSCI | CCNGG | 1 cut(s) | 500 |
| BstUI | CGCG | 1 cut(s) | 173 |
| BstV1I | GCAGC | 1 cut(s) | 280 |
| BsuRI | GGCC | 2 cut(s) | 82, 261 |
| BtgI | CCRYGG | 1 cut(s) | 37 |
| BtsIMutI | CAGTG | 1 cut(s) | 424 |
| BveI | ACCTGC | 1 cut(s) | 83 |
| Cac8I | GCNNGC | 1 cut(s) | 263 |
| Cfr13I | GGNCC | 1 cut(s) | 259 |
| CseI | GACGC | 1 cut(s) | 320 |
| Csp6I | GTAC | 2 cut(s) | 143, 551 |
| CviAII | CATG | 3 cut(s) | 38, 187, 195 |
| CviQI | GTAC | 2 cut(s) | 143, 551 |
| DdeI | CTNAG | 1 cut(s) | 468 |
| DpnI | GATC | 1 cut(s) | 369 |
| DpnII | GATC | 1 cut(s) | 367 |
| Eco130I | CCWWGG | 1 cut(s) | 37 |
| Eco147I | AGGCCT | 1 cut(s) | 82 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 69 |
| EcoO109I | RGGNCCY | 1 cut(s) | 259 |
| EcoRI | GAATTC | 1 cut(s) | 207 |
| EcoRII | CCWGG | 1 cut(s) | 500 |
| EcoT14I | CCWWGG | 1 cut(s) | 37 |
| ErhI | CCWWGG | 1 cut(s) | 37 |
| FaeI | CATG | 3 cut(s) | 41, 190, 198 |
| FaiI | YATR | 9 cut(s) | 39, 188, 196, 222, 245, 270, 281, 354, 421 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 309, 341 |
| FatI | CATG | 3 cut(s) | 37, 186, 194 |
| Fnu4HI | GCNGC | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 1 cut(s) | 294 |
| FspBI | CTAG | 3 cut(s) | 51, 228, 302 |
| GluI | GCNGC | 1 cut(s) | 294 |
| GsuI | CTGGAG | 2 cut(s) | 97, 153 |
| HaeIII | GGCC | 2 cut(s) | 82, 261 |
| HgaI | GACGC | 1 cut(s) | 320 |
| Hin1I | GRCGYC | 1 cut(s) | 312 |
| Hin1II | CATG | 3 cut(s) | 41, 190, 198 |
| HinfI | GANTC | 1 cut(s) | 430 |
| HphI | GGTGA | 1 cut(s) | 397 |
| Hpy166II | GTNNAC | 1 cut(s) | 388 |
| Hpy188I | TCNGA | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 132, 302 |
| Hpy8I | GTNNAC | 1 cut(s) | 388 |
| HpyCH4V | TGCA | 1 cut(s) | 70 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 238, 473, 535 |
| HpyF3I | CTNAG | 1 cut(s) | 468 |
| Hsp92I | GRCGYC | 1 cut(s) | 312 |
| Hsp92II | CATG | 3 cut(s) | 41, 190, 198 |
| Kzo9I | GATC | 1 cut(s) | 367 |
| LmnI | GCTCC | 3 cut(s) | 67, 238, 534 |
| Lsp1109I | GCAGC | 1 cut(s) | 280 |
| LweI | GCATC | 1 cut(s) | 428 |
| MaeI | CTAG | 3 cut(s) | 51, 228, 302 |
| MaeIII | GTNAC | 4 cut(s) | 98, 422, 485, 496 |
| MalI | GATC | 1 cut(s) | 369 |
| MboI | GATC | 1 cut(s) | 367 |
| MluCI | AATT | 5 cut(s) | 20, 207, 360, 403, 491 |
| MlyI | GAGTC | 1 cut(s) | 424 |
| MnlI | CCTC | 9 cut(s) | 66, 72, 93, 140, 250, 340, 373, 376, 502 |
| MseI | TTAA | 5 cut(s) | 5, 17, 23, 327, 399 |
| MspR9I | CCNGG | 1 cut(s) | 502 |
| MvaI | CCWGG | 1 cut(s) | 502 |
| MvnI | CGCG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 238, 473, 535 |
| NcoI | CCATGG | 1 cut(s) | 37 |
| NdeII | GATC | 1 cut(s) | 367 |
| NlaIII | CATG | 3 cut(s) | 41, 190, 198 |
| NmuCI | GTSAC | 1 cut(s) | 422 |
| NspI | RCATGY | 1 cut(s) | 198 |
| PceI | AGGCCT | 1 cut(s) | 82 |
| Pfl23II | CGTACG | 1 cut(s) | 142 |
| PkrI | GCNGC | 1 cut(s) | 295 |
| PleI | GAGTC | 1 cut(s) | 424 |
| PpsI | GAGTC | 1 cut(s) | 424 |
| Psp6I | CCWGG | 1 cut(s) | 500 |
| PspGI | CCWGG | 1 cut(s) | 500 |
| PspLI | CGTACG | 1 cut(s) | 142 |
| PspPI | GGNCC | 1 cut(s) | 259 |
| RsaI | GTAC | 2 cut(s) | 144, 552 |
| RsaNI | GTAC | 2 cut(s) | 143, 551 |
| SaqAI | TTAA | 5 cut(s) | 5, 17, 23, 327, 399 |
| SatI | GCNGC | 1 cut(s) | 294 |
| Sau3AI | GATC | 1 cut(s) | 367 |
| Sau96I | GGNCC | 1 cut(s) | 259 |
| SchI | GAGTC | 1 cut(s) | 424 |
| ScrFI | CCNGG | 1 cut(s) | 502 |
| SetI | ASST | 6 cut(s) | 64, 97, 243, 387, 503, 547 |
| SfaNI | GCATC | 1 cut(s) | 428 |
| SmlI | CTYRAG | 1 cut(s) | 57 |
| SmoI | CTYRAG | 1 cut(s) | 57 |
| Sse9I | AATT | 5 cut(s) | 20, 207, 360, 403, 491 |
| SseBI | AGGCCT | 1 cut(s) | 82 |
| SsiI | CCGC | 1 cut(s) | 441 |
| SspI | AATATT | 1 cut(s) | 9 |
| SspMI | CTAG | 3 cut(s) | 51, 228, 302 |
| StuI | AGGCCT | 1 cut(s) | 82 |
| StyD4I | CCNGG | 1 cut(s) | 500 |
| StyI | CCWWGG | 1 cut(s) | 37 |
| TaqI | TCGA | 1 cut(s) | 114 |
| TasI | AATT | 5 cut(s) | 20, 207, 360, 403, 491 |
| TatI | WGTACW | 1 cut(s) | 550 |
| Tru1I | TTAA | 5 cut(s) | 5, 17, 23, 327, 399 |
| Tru9I | TTAA | 5 cut(s) | 5, 17, 23, 327, 399 |
| TscAI | CASTG | 1 cut(s) | 431 |
| TseFI | GTSAC | 1 cut(s) | 422 |
| TseI | GCWGC | 1 cut(s) | 293 |
| Tsp45I | GTSAC | 1 cut(s) | 422 |
| TspDTI | ATGAA | 2 cut(s) | 175, 470 |
| TspGWI | ACGGA | 1 cut(s) | 251 |
| TspRI | CASTG | 1 cut(s) | 431 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 69 |
| XapI | RAATTY | 2 cut(s) | 207, 491 |
| XbaI | TCTAGA | 1 cut(s) | 301 |
| XceI | RCATGY | 1 cut(s) | 198 |
| XspI | CTAG | 3 cut(s) | 51, 228, 302 |