ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF7813 | PF25105 | 3 - 146 | 5.7e-08 | Family of unknown function (DUF7813) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 402 |
| AccI | GTMKAC | 1 cut(s) | 134 |
| AccII | CGCG | 2 cut(s) | 140, 303 |
| AcoI | YGGCCR | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 225, 286 |
| AgsI | TTSAA | 1 cut(s) | 418 |
| AluBI | AGCT | 1 cut(s) | 10 |
| AluI | AGCT | 1 cut(s) | 10 |
| AoxI | GGCC | 3 cut(s) | 227, 396, 406 |
| AspLEI | GCGC | 1 cut(s) | 305 |
| AspS9I | GGNCC | 1 cut(s) | 397 |
| AsuHPI | GGTGA | 5 cut(s) | 43, 114, 256, 346, 424 |
| BccI | CCATC | 1 cut(s) | 443 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 81, 115 |
| BfaI | CTAG | 1 cut(s) | 381 |
| BisI | GCNGC | 1 cut(s) | 182 |
| BlsI | GCNGC | 1 cut(s) | 183 |
| BmgT120I | GGNCC | 1 cut(s) | 397 |
| BmiI | GGNNCC | 2 cut(s) | 277, 316 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6 |
| BpuEI | CTTGAG | 1 cut(s) | 136 |
| BsaJI | CCNNGG | 1 cut(s) | 441 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 225, 286 |
| BseDI | CCNNGG | 1 cut(s) | 441 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 225, 286 |
| BseRI | GAGGAG | 3 cut(s) | 38, 64, 109 |
| BsgI | GTGCAG | 1 cut(s) | 75 |
| Bsh1236I | CGCG | 2 cut(s) | 140, 303 |
| Bsh1285I | CGRYCG | 1 cut(s) | 138 |
| BshFI | GGCC | 3 cut(s) | 229, 398, 408 |
| BsiEI | CGRYCG | 1 cut(s) | 138 |
| BsiSI | CCGG | 2 cut(s) | 226, 405 |
| BslFI | GGGAC | 1 cut(s) | 141 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 225, 286 |
| BsmFI | GGGAC | 1 cut(s) | 141 |
| BsnI | GGCC | 3 cut(s) | 229, 398, 408 |
| BspANI | GGCC | 3 cut(s) | 229, 398, 408 |
| BspFNI | CGCG | 2 cut(s) | 140, 303 |
| BspLI | GGNNCC | 2 cut(s) | 277, 316 |
| BsrBI | CCGCTC | 1 cut(s) | 402 |
| BssECI | CCNNGG | 1 cut(s) | 441 |
| Bst6I | CTCTTC | 2 cut(s) | 65, 166 |
| BstC8I | GCNNGC | 1 cut(s) | 400 |
| BstDEI | CTNAG | 1 cut(s) | 6 |
| BstDSI | CCRYGG | 1 cut(s) | 441 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 284 |
| BstFNI | CGCG | 2 cut(s) | 140, 303 |
| BstHHI | GCGC | 1 cut(s) | 305 |
| BstMCI | CGRYCG | 1 cut(s) | 138 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 235, 321 |
| BstUI | CGCG | 2 cut(s) | 140, 303 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 442 |
| BsuRI | GGCC | 3 cut(s) | 229, 398, 408 |
| BtgI | CCRYGG | 1 cut(s) | 441 |
| Cac8I | GCNNGC | 1 cut(s) | 400 |
| CfoI | GCGC | 1 cut(s) | 305 |
| Cfr13I | GGNCC | 1 cut(s) | 397 |
| CviAII | CATG | 1 cut(s) | 394 |
| CviJI | RGCY | 8 cut(s) | 10, 23, 229, 315, 329, 398, 408, 422 |
| CviKI_1 | RGCY | 8 cut(s) | 10, 23, 229, 315, 329, 398, 408, 422 |
| DdeI | CTNAG | 1 cut(s) | 6 |
| EaeI | YGGCCR | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 2 cut(s) | 65, 166 |
| EarI | CTCTTC | 2 cut(s) | 65, 166 |
| EciI | GGCGGA | 2 cut(s) | 5, 225 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 284 |
| FaeI | CATG | 1 cut(s) | 397 |
| FaiI | YATR | 2 cut(s) | 341, 395 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 145, 177 |
| FaqI | GGGAC | 1 cut(s) | 141 |
| FatI | CATG | 1 cut(s) | 393 |
| FauI | CCCGC | 4 cut(s) | 175, 308, 329, 407 |
| FblI | GTMKAC | 1 cut(s) | 134 |
| Fnu4HI | GCNGC | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 1 cut(s) | 182 |
| FspBI | CTAG | 1 cut(s) | 381 |
| GlaI | GCGC | 1 cut(s) | 304 |
| GluI | GCNGC | 1 cut(s) | 182 |
| HaeIII | GGCC | 3 cut(s) | 229, 398, 408 |
| HapII | CCGG | 2 cut(s) | 226, 405 |
| HhaI | GCGC | 1 cut(s) | 305 |
| Hin1II | CATG | 1 cut(s) | 397 |
| Hin6I | GCGC | 1 cut(s) | 303 |
| HinP1I | GCGC | 1 cut(s) | 303 |
| HincII | GTYRAC | 1 cut(s) | 135 |
| HindII | GTYRAC | 1 cut(s) | 135 |
| HinfI | GANTC | 1 cut(s) | 214 |
| HpaII | CCGG | 2 cut(s) | 226, 405 |
| HphI | GGTGA | 5 cut(s) | 43, 114, 256, 346, 424 |
| Hpy166II | GTNNAC | 1 cut(s) | 135 |
| Hpy188I | TCNGA | 2 cut(s) | 275, 391 |
| Hpy188III | TCNNGA | 1 cut(s) | 102 |
| Hpy8I | GTNNAC | 1 cut(s) | 135 |
| Hpy99I | CGWCG | 4 cut(s) | 103, 136, 275, 287 |
| HpyAV | CCTTC | 8 cut(s) | 43, 96, 138, 155, 204, 230, 263, 424 |
| HpyCH4V | TGCA | 1 cut(s) | 92 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 235, 321 |
| HpyF3I | CTNAG | 1 cut(s) | 6 |
| Hsp92II | CATG | 1 cut(s) | 397 |
| HspAI | GCGC | 1 cut(s) | 303 |
| LmnI | GCTCC | 3 cut(s) | 15, 320, 407 |
| LpnPI | CCDG | 2 cut(s) | 239, 418 |
| MaeI | CTAG | 1 cut(s) | 381 |
| MbiI | CCGCTC | 1 cut(s) | 402 |
| MboII | GAAGA | 6 cut(s) | 28, 52, 72, 153, 286, 328 |
| MluCI | AATT | 2 cut(s) | 362, 428 |
| MlyI | GAGTC | 1 cut(s) | 208 |
| MmeI | TCCRAC | 2 cut(s) | 253, 414 |
| MseI | TTAA | 1 cut(s) | 372 |
| MslI | CAYNNNNRTG | 1 cut(s) | 440 |
| MspI | CCGG | 2 cut(s) | 226, 405 |
| MvnI | CGCG | 2 cut(s) | 140, 303 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 235, 321 |
| NlaIII | CATG | 1 cut(s) | 397 |
| NlaIV | GGNNCC | 2 cut(s) | 277, 316 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 104, 137, 279 |
| PkrI | GCNGC | 1 cut(s) | 183 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| PspN4I | GGNNCC | 2 cut(s) | 277, 316 |
| PspPI | GGNCC | 1 cut(s) | 397 |
| RseI | CAYNNNNRTG | 1 cut(s) | 440 |
| SalI | GTCGAC | 1 cut(s) | 133 |
| SaqAI | TTAA | 1 cut(s) | 372 |
| SatI | GCNGC | 1 cut(s) | 182 |
| Sau96I | GGNCC | 1 cut(s) | 397 |
| SchI | GAGTC | 1 cut(s) | 208 |
| SetI | ASST | 9 cut(s) | 12, 32, 48, 56, 119, 179, 235, 359, 455 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 440 |
| SmlI | CTYRAG | 1 cut(s) | 151 |
| SmoI | CTYRAG | 1 cut(s) | 151 |
| Sse9I | AATT | 2 cut(s) | 362, 428 |
| SspMI | CTAG | 1 cut(s) | 381 |
| TaqI | TCGA | 4 cut(s) | 101, 134, 173, 282 |
| TasI | AATT | 2 cut(s) | 362, 428 |
| TauI | GCSGC | 1 cut(s) | 184 |
| Tru1I | TTAA | 1 cut(s) | 372 |
| Tru9I | TTAA | 1 cut(s) | 372 |
| TspDTI | ATGAA | 1 cut(s) | 328 |
| TspGWI | ACGGA | 1 cut(s) | 430 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 284 |
| XmiI | GTMKAC | 1 cut(s) | 134 |
| XspI | CTAG | 1 cut(s) | 381 |