Rorug02G0351800

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000072
Physical Location & Seq
Forward (+)
44259830 .. 44265438
5609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0351800.1

Sequence Viewer

Length: 1116 bp
ATGAAGCTCACTGTAAAGACCCTCAAGGGCAGCCATTTCGAAATTAGGGTTCAGCCCACTGACACCGTGATGGGTGTTAAGAAGAACATTGAGGATATACAAGGGAAAGATAATTACCCTTGTGGGCAGCAGTTACTGATACACAATGGCAAAGTCTTGAAAGACGAAACTACCTTGGCCGACAACAAGGTCACTGAAGATGGTTTTCTTGTTGTCATGCTTAGTAAGAGTAAAACTACAGGCTTAGCAGGGGCTTCATCTGCTCAGCCTGCTTCTACAATTCCACCTACAACTGCACCAATCAGAAATTCTACTTCCAGAGCCGAAGCTCCCATACAAGCACCGCCCTCAGAGAGTACCACTCCTGCTTCAGACACCGCTAATGTGCATACTGATACCTATGGTCAAGCTGCGTCAAATTTAGTTGCTGGAACTAATCTTGATCAGACTATTCAACAGATAATGGATATGGGTGGTGGAAATTGGGACAGAGAAACAGTTACACGTGCACTTCGAGCGGCTTATAACAACCCAGAGCGAGCAGTGGACTACTTGTACTCTAGTATTCCAGAAACAGCGGAAGTTGCAGTGCCTGTGGCTCATTTCCCTGCAAGTCAGGCAACTGAAACAGGCATAGCCAATGCTCCACCTGTCTCCGGAGCACCTAATTCAGCTCCCCTGAATATGTTTCCACAGGAAGCACTGTCCGGTGCTGGTGCTGGTGCACTTGGATCCCTCGACTTCCTTAGAAACAATCATCAGTTCCAAACGTTGCGCTCAATGGTACAAGCCAACCCACAAATTTTACAGCCCATGCTGCAGGAACTTGGAAAGCAAAACCCCCAGCTTTTAAGATTAATTCAGGAGCACCATGCCGAGTTCCTTCAGTTAATAAATGAACCTCTTGAGGGTTCTGAAGGTGACATGTTTGAACAGCCTGATCAAGAAATGCCACATGCTATCAATGTAACTCCAGCGGAACAGGAGGCCATTGAACGACTTGAGGCAATGGGATTTGATAGAGCCTTGGTGATTGAGGCGTTTTTGGCATGTGACCGTAATGAAGAGCTGGCAGCCAACTATCTATTGGAGAATGCTGGAGATTTCGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

371

Amino Acids

40.04

Weight (kDa)

4.65

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad60-SLD PF11976 1 - 74 1.3e-06 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 3 - 76 2.9e-15 Ubiquitin family
UBA PF00627 148 - 185 4.1e-11 UBA/TS-N domain
XPC-binding PF09280 246 - 301 1.4e-22 XPC-binding domain
UBA PF00627 327 - 362 2.5e-11 UBA/TS-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
AasI GACNNNNNNGTC 1 cut(s) 188
AccBSI CCGCTC 1 cut(s) 518
AccIII TCCGGA 1 cut(s) 656
AciI CCGC 5 cut(s) 344, 378, 518, 578, 977
AclI AACGTT 1 cut(s) 770
AclWI GGATC 2 cut(s) 726, 739
AcoI YGGCCR 1 cut(s) 177
AcsI RAATTY 3 cut(s) 307, 418, 801
AcuI CTGAAG 4 cut(s) 216, 354, 869, 936
AcvI CACGTG 1 cut(s) 506
AfaI GTAC 3 cut(s) 358, 557, 786
AfiI CCNNNNNNNGG 2 cut(s) 656, 908
AflIII ACRYGT 2 cut(s) 503, 924
AgsI TTSAA 4 cut(s) 160, 455, 932, 995
AjuI GAANNNNNNNTTGG 2 cut(s) 292, 324
AluBI AGCT 6 cut(s) 7, 329, 410, 674, 847, 1069
AluI AGCT 6 cut(s) 7, 329, 410, 674, 847, 1069
Alw21I GWGCWC 4 cut(s) 511, 664, 727, 870
Alw26I GTCTC 1 cut(s) 658
Alw44I GTGCAC 2 cut(s) 507, 723
AlwI GGATC 2 cut(s) 726, 739
AlwNI CAGNNNCTG 2 cut(s) 136, 593
Aor13HI TCCGGA 1 cut(s) 656
AoxI GGCC 2 cut(s) 177, 987
ApaLI GTGCAC 2 cut(s) 507, 723
ApeKI GCWGC 5 cut(s) 30, 127, 410, 817, 1073
ApoI RAATTY 3 cut(s) 307, 418, 801
AseI ATTAAT 1 cut(s) 857
AspLEI GCGC 1 cut(s) 777
AsuHPI GGTGA 2 cut(s) 932, 1042
AsuII TTCGAA 2 cut(s) 39, 1107
BaeGI GKGCMC 2 cut(s) 511, 727
BamHI GGATCC 1 cut(s) 731
BarI GAAGNNNNNNTAC 2 cut(s) 318, 350
BbrPI CACGTG 1 cut(s) 506
Bbv12I GWGCWC 4 cut(s) 511, 664, 727, 870
BbvI GCAGC 5 cut(s) 42, 139, 397, 804, 1085
BccI CCATC 2 cut(s) 64, 194
BcgI CGANNNNNNTGC 2 cut(s) 19, 53
BclI TGATCA 2 cut(s) 442, 940
BcoDI GTCTC 1 cut(s) 658
BfaI CTAG 1 cut(s) 561
BfmI CTRYAG 2 cut(s) 237, 818
BisI GCNGC 6 cut(s) 31, 128, 411, 519, 818, 1074
BlpI GCTNAGC 2 cut(s) 244, 264
BlsI GCNGC 6 cut(s) 32, 129, 412, 520, 819, 1075
BmiI GGNNCC 1 cut(s) 733
BplI GAGNNNNNCTC 2 cut(s) 346, 378
BpmI CTGGAG 1 cut(s) 957
Bpu1102I GCTNAGC 2 cut(s) 244, 264
Bpu14I TTCGAA 2 cut(s) 39, 1107
BpuEI CTTGAG 3 cut(s) 8, 926, 1022
BsaAI YACGTR 1 cut(s) 506
BsaJI CCNNGG 2 cut(s) 174, 1026
BsaWI WCCGGW 2 cut(s) 656, 707
Bsc4I CCNNNNNNNGG 2 cut(s) 656, 908
Bse3DI GCAATG 1 cut(s) 1014
BseAI TCCGGA 1 cut(s) 656
BseDI CCNNGG 2 cut(s) 174, 1026
BseLI CCNNNNNNNGG 2 cut(s) 656, 908
BseMI GCAATG 1 cut(s) 1014
BseMII CTCAG 2 cut(s) 278, 363
BseSI GKGCMC 2 cut(s) 511, 727
BseXI GCAGC 5 cut(s) 42, 139, 397, 804, 1085
BseYI CCCAGC 1 cut(s) 843
BsgI GTGCAG 1 cut(s) 279
BshFI GGCC 2 cut(s) 179, 989
BsiHKAI GWGCWC 4 cut(s) 511, 664, 727, 870
BsiSI CCGG 2 cut(s) 657, 708
BslFI GGGAC 1 cut(s) 500
BslI CCNNNNNNNGG 2 cut(s) 656, 908
BsmAI GTCTC 1 cut(s) 658
BsmFI GGGAC 1 cut(s) 500
BsmI GAATGC 1 cut(s) 1099
BsnI GGCC 2 cut(s) 179, 989
Bsp119I TTCGAA 2 cut(s) 39, 1107
Bsp1286I GDGCHC 4 cut(s) 511, 664, 727, 870
Bsp13I TCCGGA 1 cut(s) 656
Bsp143I GATC 3 cut(s) 442, 731, 940
Bsp1720I GCTNAGC 2 cut(s) 244, 264
BspACI CCGC 5 cut(s) 344, 378, 518, 578, 977
BspANI GGCC 2 cut(s) 179, 989
BspCNI CTCAG 2 cut(s) 277, 362
BspEI TCCGGA 1 cut(s) 656
BspLI GGNNCC 1 cut(s) 733
BspMAI CTGCAG 1 cut(s) 822
BspPI GGATC 2 cut(s) 726, 739
BspQI GCTCTTC 1 cut(s) 1059
BspT104I TTCGAA 2 cut(s) 39, 1107
BsrBI CCGCTC 1 cut(s) 518
BsrDI GCAATG 1 cut(s) 1014
BssECI CCNNGG 2 cut(s) 174, 1026
BssMI GATC 3 cut(s) 442, 731, 940
BssT1I CCWWGG 2 cut(s) 174, 1026
Bst4CI ACNGT 5 cut(s) 13, 67, 499, 705, 1058
Bst6I CTCTTC 1 cut(s) 1059
BstBAI YACGTR 1 cut(s) 506
BstBI TTCGAA 2 cut(s) 39, 1107
BstC8I GCNNGC 3 cut(s) 270, 540, 1071
BstDEI CTNAG 5 cut(s) 221, 244, 264, 349, 746
BstHHI GCGC 1 cut(s) 777
BstKTI GATC 3 cut(s) 445, 734, 943
BstMAI GTCTC 1 cut(s) 658
BstMBI GATC 3 cut(s) 442, 731, 940
BstMWI GCNNNNNNNGC 7 cut(s) 260, 269, 515, 584, 617, 817, 1046
BstNSI RCATGY 3 cut(s) 928, 959, 1053
BstSFI CTRYAG 2 cut(s) 237, 818
BstSLI GKGCMC 2 cut(s) 511, 727
BstV1I GCAGC 5 cut(s) 42, 139, 397, 804, 1085
BstX2I RGATCY 1 cut(s) 731
BstYI RGATCY 1 cut(s) 731
BsuRI GGCC 2 cut(s) 179, 989
BtsI GCAGTG 2 cut(s) 549, 594
BtsIMutI CAGTG 6 cut(s) 9, 57, 192, 549, 594, 701
Cac8I GCNNGC 3 cut(s) 270, 540, 1071
CaiI CAGNNNCTG 2 cut(s) 136, 593
CfoI GCGC 1 cut(s) 777
CseI GACGC 1 cut(s) 402
Csp6I GTAC 3 cut(s) 357, 556, 785
CviAII CATG 6 cut(s) 217, 814, 872, 925, 956, 1050
CviQI GTAC 3 cut(s) 357, 556, 785
DdeI CTNAG 5 cut(s) 221, 244, 264, 349, 746
DpnI GATC 3 cut(s) 444, 733, 942
DpnII GATC 3 cut(s) 442, 731, 940
DrdI GACNNNNNNGTC 1 cut(s) 188
DseDI GACNNNNNNGTC 1 cut(s) 188
EaeI YGGCCR 1 cut(s) 177
Eam1104I CTCTTC 1 cut(s) 1059
EarI CTCTTC 1 cut(s) 1059
Eco130I CCWWGG 2 cut(s) 174, 1026
Eco57I CTGAAG 4 cut(s) 216, 354, 869, 936
Eco72I CACGTG 1 cut(s) 506
EcoT14I CCWWGG 2 cut(s) 174, 1026
ErhI CCWWGG 2 cut(s) 174, 1026
FaeI CATG 6 cut(s) 220, 817, 875, 928, 959, 1053
FaqI GGGAC 1 cut(s) 500
FatI CATG 6 cut(s) 216, 813, 871, 924, 955, 1049
FbaI TGATCA 2 cut(s) 442, 940
Fnu4HI GCNGC 6 cut(s) 31, 128, 411, 519, 818, 1074
Fsp4HI GCNGC 6 cut(s) 31, 128, 411, 519, 818, 1074
FspBI CTAG 1 cut(s) 561
GlaI GCGC 1 cut(s) 776
GluI GCNGC 6 cut(s) 31, 128, 411, 519, 818, 1074
GsaI CCCAGC 1 cut(s) 847
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 2 cut(s) 179, 989
HapII CCGG 2 cut(s) 657, 708
HgaI GACGC 1 cut(s) 402
HhaI GCGC 1 cut(s) 777
Hin1II CATG 6 cut(s) 220, 817, 875, 928, 959, 1053
Hin6I GCGC 1 cut(s) 775
HinP1I GCGC 1 cut(s) 775
HpaII CCGG 2 cut(s) 657, 708
HphI GGTGA 2 cut(s) 932, 1042
Hpy166II GTNNAC 3 cut(s) 509, 547, 725
Hpy188I TCNGA 5 cut(s) 305, 352, 373, 447, 916
Hpy188III TCNNGA 8 cut(s) 157, 318, 440, 569, 657, 863, 905, 944
Hpy8I GTNNAC 3 cut(s) 509, 547, 725
HpyAV CCTTC 2 cut(s) 893, 911
HpyCH4III ACNGT 5 cut(s) 13, 67, 499, 705, 1058
HpyCH4IV ACGT 2 cut(s) 505, 770
HpyCH4V TGCA 7 cut(s) 296, 388, 509, 587, 611, 725, 820
HpyF10VI GCNNNNNNNGC 7 cut(s) 260, 269, 515, 584, 617, 817, 1046
HpyF3I CTNAG 5 cut(s) 221, 244, 264, 349, 746
HpySE526I ACGT 2 cut(s) 505, 770
Hsp92II CATG 6 cut(s) 220, 817, 875, 928, 959, 1053
HspAI GCGC 1 cut(s) 775
Kpn2I TCCGGA 1 cut(s) 656
Ksp22I TGATCA 2 cut(s) 442, 940
Kzo9I GATC 3 cut(s) 442, 731, 940
LguI GCTCTTC 1 cut(s) 1059
LmnI GCTCC 5 cut(s) 334, 649, 659, 679, 865
Lsp1109I GCAGC 5 cut(s) 42, 139, 397, 804, 1085
MaeI CTAG 1 cut(s) 561
MaeII ACGT 2 cut(s) 505, 770
MaeIII GTNAC 6 cut(s) 132, 190, 499, 920, 967, 1052
MalI GATC 3 cut(s) 444, 733, 942
MbiI CCGCTC 1 cut(s) 518
MboI GATC 3 cut(s) 442, 731, 940
MboII GAAGA 3 cut(s) 94, 209, 1076
MflI RGATCY 1 cut(s) 731
MhlI GDGCHC 4 cut(s) 511, 664, 727, 870
MluCI AATT 9 cut(s) 42, 112, 279, 307, 418, 481, 667, 801, 858
MnlI CCTC 9 cut(s) 32, 85, 358, 746, 901, 912, 979, 997, 1030
MroI TCCGGA 1 cut(s) 656
MseI TTAA 4 cut(s) 78, 851, 857, 890
MslI CAYNNNNRTG 1 cut(s) 68
MspA1I CMGCKG 2 cut(s) 578, 977
MspI CCGG 2 cut(s) 657, 708
Mva1269I GAATGC 1 cut(s) 1099
MwoI GCNNNNNNNGC 7 cut(s) 260, 269, 515, 584, 617, 817, 1046
NdeII GATC 3 cut(s) 442, 731, 940
NlaIII CATG 6 cut(s) 220, 817, 875, 928, 959, 1053
NlaIV GGNNCC 1 cut(s) 733
NmeAIII GCCGAG 1 cut(s) 901
NmuCI GTSAC 3 cut(s) 190, 920, 1052
NspI RCATGY 3 cut(s) 928, 959, 1053
NspV TTCGAA 2 cut(s) 39, 1107
PciI ACATGT 1 cut(s) 924
PciSI GCTCTTC 1 cut(s) 1059
PcsI WCGNNNNNNNCGW 1 cut(s) 511
PctI GAATGC 1 cut(s) 1099
PkrI GCNGC 6 cut(s) 32, 129, 412, 520, 819, 1075
PmaCI CACGTG 1 cut(s) 506
PmlI CACGTG 1 cut(s) 506
Ppu21I YACGTR 1 cut(s) 506
PscI ACATGT 1 cut(s) 924
PshBI ATTAAT 1 cut(s) 857
PsiI TTATAA 1 cut(s) 525
Psp1406I AACGTT 1 cut(s) 770
PspCI CACGTG 1 cut(s) 506
PspFI CCCAGC 1 cut(s) 843
PspN4I GGNNCC 1 cut(s) 733
PstI CTGCAG 1 cut(s) 822
PstNI CAGNNNCTG 2 cut(s) 136, 593
PsuI RGATCY 1 cut(s) 731
RsaI GTAC 3 cut(s) 358, 557, 786
RsaNI GTAC 3 cut(s) 357, 556, 785
RseI CAYNNNNRTG 1 cut(s) 68
SapI GCTCTTC 1 cut(s) 1059
SaqAI TTAA 4 cut(s) 78, 851, 857, 890
SatI GCNGC 6 cut(s) 31, 128, 411, 519, 818, 1074
Sau3AI GATC 3 cut(s) 442, 731, 940
SduI GDGCHC 4 cut(s) 511, 664, 727, 870
SfcI CTRYAG 2 cut(s) 237, 818
SfuI TTCGAA 2 cut(s) 39, 1107
SmiMI CAYNNNNRTG 1 cut(s) 68
SmlI CTYRAG 3 cut(s) 23, 905, 1001
SmoI CTYRAG 3 cut(s) 23, 905, 1001
Sse9I AATT 9 cut(s) 42, 112, 279, 307, 418, 481, 667, 801, 858
SsiI CCGC 5 cut(s) 344, 378, 518, 578, 977
SspMI CTAG 1 cut(s) 561
StyI CCWWGG 2 cut(s) 174, 1026
TaaI ACNGT 5 cut(s) 13, 67, 499, 705, 1058
TaiI ACGT 2 cut(s) 508, 773
TaqI TCGA 4 cut(s) 39, 514, 738, 1107
TasI AATT 9 cut(s) 42, 112, 279, 307, 418, 481, 667, 801, 858
TatI WGTACW 1 cut(s) 555
TauI GCSGC 1 cut(s) 521
Tru1I TTAA 4 cut(s) 78, 851, 857, 890
Tru9I TTAA 4 cut(s) 78, 851, 857, 890
TscAI CASTG 6 cut(s) 16, 64, 199, 549, 594, 708
TseFI GTSAC 3 cut(s) 190, 920, 1052
TseI GCWGC 5 cut(s) 30, 127, 410, 817, 1073
Tsp45I GTSAC 3 cut(s) 190, 920, 1052
TspDTI ATGAA 4 cut(s) 17, 246, 912, 1077
TspRI CASTG 6 cut(s) 16, 64, 199, 549, 594, 708
VneI GTGCAC 2 cut(s) 507, 723
VspI ATTAAT 1 cut(s) 857
XapI RAATTY 3 cut(s) 307, 418, 801
XceI RCATGY 3 cut(s) 928, 959, 1053
XcmI CCANNNNNNNNNTGG 1 cut(s) 1084
XspI CTAG 1 cut(s) 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.