Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 87, 100, 257 |
| AcsI | RAATTY | 1 cut(s) | 153 |
| AcuI | CTGAAG | 1 cut(s) | 140 |
| AgsI | TTSAA | 4 cut(s) | 29, 64, 104, 134 |
| AluBI | AGCT | 2 cut(s) | 19, 128 |
| AluI | AGCT | 2 cut(s) | 19, 128 |
| AlwI | GGATC | 3 cut(s) | 87, 100, 257 |
| AoxI | GGCC | 1 cut(s) | 238 |
| ApeKI | GCWGC | 2 cut(s) | 38, 176 |
| ApoI | RAATTY | 1 cut(s) | 153 |
| AspS9I | GGNCC | 1 cut(s) | 239 |
| BamHI | GGATCC | 1 cut(s) | 92 |
| BbvI | GCAGC | 2 cut(s) | 50, 188 |
| BfaI | CTAG | 1 cut(s) | 279 |
| BisI | GCNGC | 2 cut(s) | 39, 177 |
| BlsI | GCNGC | 2 cut(s) | 40, 178 |
| BmgT120I | GGNCC | 1 cut(s) | 239 |
| BmiI | GGNNCC | 1 cut(s) | 94 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BpmI | CTGGAG | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 1 cut(s) | 245 |
| BseDI | CCNNGG | 1 cut(s) | 245 |
| BseMII | CTCAG | 1 cut(s) | 94 |
| BseXI | GCAGC | 2 cut(s) | 50, 188 |
| BsgI | GTGCAG | 1 cut(s) | 195 |
| BshFI | GGCC | 1 cut(s) | 240 |
| BsnI | GGCC | 1 cut(s) | 240 |
| Bsp143I | GATC | 3 cut(s) | 76, 92, 249 |
| Bsp19I | CCATGG | 1 cut(s) | 245 |
| BspANI | GGCC | 1 cut(s) | 240 |
| BspCNI | CTCAG | 1 cut(s) | 93 |
| BspLI | GGNNCC | 1 cut(s) | 94 |
| BspPI | GGATC | 3 cut(s) | 87, 100, 257 |
| BssECI | CCNNGG | 1 cut(s) | 245 |
| BssMI | GATC | 3 cut(s) | 76, 92, 249 |
| BssT1I | CCWWGG | 1 cut(s) | 245 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 206 |
| BstC8I | GCNNGC | 1 cut(s) | 126 |
| BstDEI | CTNAG | 1 cut(s) | 80 |
| BstDSI | CCRYGG | 1 cut(s) | 245 |
| BstKTI | GATC | 3 cut(s) | 79, 95, 252 |
| BstMBI | GATC | 3 cut(s) | 76, 92, 249 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 197, 206 |
| BstV1I | GCAGC | 2 cut(s) | 50, 188 |
| BstX2I | RGATCY | 1 cut(s) | 92 |
| BstYI | RGATCY | 1 cut(s) | 92 |
| BsuRI | GGCC | 1 cut(s) | 240 |
| BtgI | CCRYGG | 1 cut(s) | 245 |
| Cac8I | GCNNGC | 1 cut(s) | 126 |
| Cfr13I | GGNCC | 1 cut(s) | 239 |
| CviAII | CATG | 1 cut(s) | 246 |
| CviJI | RGCY | 6 cut(s) | 9, 19, 41, 128, 179, 240 |
| CviKI_1 | RGCY | 6 cut(s) | 9, 19, 41, 128, 179, 240 |
| DdeI | CTNAG | 1 cut(s) | 80 |
| DpnI | GATC | 3 cut(s) | 78, 94, 251 |
| DpnII | GATC | 3 cut(s) | 76, 92, 249 |
| Eco130I | CCWWGG | 1 cut(s) | 245 |
| Eco32I | GATATC | 1 cut(s) | 51 |
| Eco57I | CTGAAG | 1 cut(s) | 140 |
| EcoRV | GATATC | 1 cut(s) | 51 |
| EcoT14I | CCWWGG | 1 cut(s) | 245 |
| ErhI | CCWWGG | 1 cut(s) | 245 |
| FaeI | CATG | 1 cut(s) | 249 |
| FaiI | YATR | 2 cut(s) | 86, 247 |
| FatI | CATG | 1 cut(s) | 245 |
| Fnu4HI | GCNGC | 2 cut(s) | 39, 177 |
| Fsp4HI | GCNGC | 2 cut(s) | 39, 177 |
| FspBI | CTAG | 1 cut(s) | 279 |
| GluI | GCNGC | 2 cut(s) | 39, 177 |
| GsuI | CTGGAG | 1 cut(s) | 41 |
| HaeIII | GGCC | 1 cut(s) | 240 |
| Hin1II | CATG | 1 cut(s) | 249 |
| HindIII | AAGCTT | 1 cut(s) | 126 |
| Hpy188I | TCNGA | 1 cut(s) | 195 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 118 |
| HpyAV | CCTTC | 1 cut(s) | 83 |
| HpyCH4IV | ACGT | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 4 cut(s) | 38, 147, 168, 176 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 197, 206 |
| HpyF3I | CTNAG | 1 cut(s) | 80 |
| HpySE526I | ACGT | 1 cut(s) | 172 |
| Hsp92II | CATG | 1 cut(s) | 249 |
| Kzo9I | GATC | 3 cut(s) | 76, 92, 249 |
| LpnPI | CCDG | 4 cut(s) | 5, 131, 133, 172 |
| Lsp1109I | GCAGC | 2 cut(s) | 50, 188 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeI | CTAG | 1 cut(s) | 279 |
| MaeII | ACGT | 1 cut(s) | 172 |
| MalI | GATC | 3 cut(s) | 78, 94, 251 |
| MboI | GATC | 3 cut(s) | 76, 92, 249 |
| MboII | GAAGA | 3 cut(s) | 116, 146, 281 |
| MflI | RGATCY | 1 cut(s) | 92 |
| MluCI | AATT | 4 cut(s) | 57, 142, 153, 272 |
| MnlI | CCTC | 2 cut(s) | 64, 252 |
| MseI | TTAA | 3 cut(s) | 12, 141, 283 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 197, 206 |
| NcoI | CCATGG | 1 cut(s) | 245 |
| NdeII | GATC | 3 cut(s) | 76, 92, 249 |
| NlaIII | CATG | 1 cut(s) | 249 |
| NlaIV | GGNNCC | 1 cut(s) | 94 |
| PkrI | GCNGC | 2 cut(s) | 40, 178 |
| PspN4I | GGNNCC | 1 cut(s) | 94 |
| PspPI | GGNCC | 1 cut(s) | 239 |
| PsuI | RGATCY | 1 cut(s) | 92 |
| SaqAI | TTAA | 3 cut(s) | 12, 141, 283 |
| SatI | GCNGC | 2 cut(s) | 39, 177 |
| Sau3AI | GATC | 3 cut(s) | 76, 92, 249 |
| Sau96I | GGNCC | 1 cut(s) | 239 |
| SetI | ASST | 5 cut(s) | 21, 75, 130, 175, 224 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| Sse9I | AATT | 4 cut(s) | 57, 142, 153, 272 |
| SspMI | CTAG | 1 cut(s) | 279 |
| StyI | CCWWGG | 1 cut(s) | 245 |
| TaiI | ACGT | 1 cut(s) | 175 |
| TasI | AATT | 4 cut(s) | 57, 142, 153, 272 |
| Tru1I | TTAA | 3 cut(s) | 12, 141, 283 |
| Tru9I | TTAA | 3 cut(s) | 12, 141, 283 |
| TseI | GCWGC | 2 cut(s) | 38, 176 |
| TspGWI | ACGGA | 1 cut(s) | 85 |
| XapI | RAATTY | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 279 |