Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 20, 225 |
| AclWI | GGATC | 2 cut(s) | 34, 47 |
| AcsI | RAATTY | 1 cut(s) | 131 |
| AluBI | AGCT | 2 cut(s) | 188, 294 |
| AluI | AGCT | 2 cut(s) | 188, 294 |
| AlwI | GGATC | 2 cut(s) | 34, 47 |
| ApoI | RAATTY | 1 cut(s) | 131 |
| AspS9I | GGNCC | 1 cut(s) | 241 |
| AvaII | GGWCC | 1 cut(s) | 241 |
| BamHI | GGATCC | 1 cut(s) | 39 |
| BanII | GRGCYC | 1 cut(s) | 110 |
| BauI | CACGAG | 1 cut(s) | 297 |
| BfaI | CTAG | 4 cut(s) | 140, 182, 197, 291 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlpI | GCTNAGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| Bme18I | GGWCC | 1 cut(s) | 241 |
| BmgT120I | GGNCC | 1 cut(s) | 241 |
| BmiI | GGNNCC | 1 cut(s) | 41 |
| BmrI | ACTGGG | 1 cut(s) | 113 |
| BmuI | ACTGGG | 1 cut(s) | 113 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 60 |
| Bse1I | ACTGG | 1 cut(s) | 108 |
| BseGI | GGATG | 1 cut(s) | 274 |
| BseNI | ACTGG | 1 cut(s) | 108 |
| BslFI | GGGAC | 1 cut(s) | 301 |
| BsmFI | GGGAC | 1 cut(s) | 301 |
| Bsp1286I | GDGCHC | 1 cut(s) | 110 |
| Bsp143I | GATC | 2 cut(s) | 39, 162 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 60 |
| BspACI | CCGC | 2 cut(s) | 20, 225 |
| BspHI | TCATGA | 1 cut(s) | 31 |
| BspLI | GGNNCC | 1 cut(s) | 41 |
| BspPI | GGATC | 2 cut(s) | 34, 47 |
| BsrI | ACTGG | 1 cut(s) | 108 |
| BssMI | GATC | 2 cut(s) | 39, 162 |
| BssSI | CACGAG | 1 cut(s) | 297 |
| Bst2BI | CACGAG | 1 cut(s) | 297 |
| Bst4CI | ACNGT | 1 cut(s) | 218 |
| BstDEI | CTNAG | 1 cut(s) | 60 |
| BstF5I | GGATG | 1 cut(s) | 274 |
| BstKTI | GATC | 2 cut(s) | 42, 165 |
| BstMBI | GATC | 2 cut(s) | 39, 162 |
| BstNSI | RCATGY | 1 cut(s) | 75 |
| BstX2I | RGATCY | 1 cut(s) | 39 |
| BstYI | RGATCY | 1 cut(s) | 39 |
| BtsCI | GGATG | 1 cut(s) | 274 |
| CciI | TCATGA | 1 cut(s) | 31 |
| Cfr13I | GGNCC | 1 cut(s) | 241 |
| CviAII | CATG | 3 cut(s) | 32, 72, 255 |
| CviJI | RGCY | 4 cut(s) | 108, 188, 252, 294 |
| CviKI_1 | RGCY | 4 cut(s) | 108, 188, 252, 294 |
| DdeI | CTNAG | 1 cut(s) | 60 |
| DpnI | GATC | 2 cut(s) | 41, 164 |
| DpnII | GATC | 2 cut(s) | 39, 162 |
| Eco24I | GRGCYC | 1 cut(s) | 110 |
| Eco32I | GATATC | 1 cut(s) | 79 |
| Eco47I | GGWCC | 1 cut(s) | 241 |
| EcoO109I | RGGNCCY | 1 cut(s) | 241 |
| EcoRV | GATATC | 1 cut(s) | 79 |
| EcoT38I | GRGCYC | 1 cut(s) | 110 |
| FaeI | CATG | 3 cut(s) | 35, 75, 258 |
| FaiI | YATR | 5 cut(s) | 33, 73, 222, 231, 256 |
| FaqI | GGGAC | 1 cut(s) | 301 |
| FatI | CATG | 3 cut(s) | 31, 71, 254 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| FokI | GGATG | 1 cut(s) | 281 |
| FriOI | GRGCYC | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| FspBI | CTAG | 4 cut(s) | 140, 182, 197, 291 |
| GluI | GCNGC | 1 cut(s) | 225 |
| Hin1II | CATG | 3 cut(s) | 35, 75, 258 |
| HinfI | GANTC | 2 cut(s) | 86, 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 202 |
| Hpy188I | TCNGA | 3 cut(s) | 85, 162, 175 |
| Hpy188III | TCNNGA | 4 cut(s) | 32, 140, 182, 297 |
| Hpy8I | GTNNAC | 1 cut(s) | 202 |
| HpyAV | CCTTC | 1 cut(s) | 254 |
| HpyCH4III | ACNGT | 1 cut(s) | 218 |
| HpyCH4IV | ACGT | 1 cut(s) | 314 |
| HpyF3I | CTNAG | 1 cut(s) | 60 |
| HpySE526I | ACGT | 1 cut(s) | 314 |
| Hsp92II | CATG | 3 cut(s) | 35, 75, 258 |
| Kzo9I | GATC | 2 cut(s) | 39, 162 |
| LpnPI | CCDG | 1 cut(s) | 89 |
| MaeI | CTAG | 4 cut(s) | 140, 182, 197, 291 |
| MaeII | ACGT | 1 cut(s) | 314 |
| MalI | GATC | 2 cut(s) | 41, 164 |
| MboI | GATC | 2 cut(s) | 39, 162 |
| MboII | GAAGA | 3 cut(s) | 145, 284, 323 |
| MflI | RGATCY | 1 cut(s) | 39 |
| MhlI | GDGCHC | 1 cut(s) | 110 |
| MluCI | AATT | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 179 |
| MnlI | CCTC | 4 cut(s) | 28, 61, 168, 205 |
| NdeII | GATC | 2 cut(s) | 39, 162 |
| NlaIII | CATG | 3 cut(s) | 35, 75, 258 |
| NlaIV | GGNNCC | 1 cut(s) | 41 |
| NspI | RCATGY | 1 cut(s) | 75 |
| PagI | TCATGA | 1 cut(s) | 31 |
| PfeI | GAWTC | 1 cut(s) | 86 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| PpuMI | RGGWCCY | 1 cut(s) | 241 |
| Psp5II | RGGWCCY | 1 cut(s) | 241 |
| PspN4I | GGNNCC | 1 cut(s) | 41 |
| PspPI | GGNCC | 1 cut(s) | 241 |
| PspPPI | RGGWCCY | 1 cut(s) | 241 |
| PsuI | RGATCY | 1 cut(s) | 39 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 2 cut(s) | 39, 162 |
| Sau96I | GGNCC | 1 cut(s) | 241 |
| SchI | GAGTC | 1 cut(s) | 179 |
| SduI | GDGCHC | 1 cut(s) | 110 |
| SetI | ASST | 5 cut(s) | 16, 190, 246, 296, 317 |
| SinI | GGWCC | 1 cut(s) | 241 |
| Sse9I | AATT | 1 cut(s) | 131 |
| SsiI | CCGC | 2 cut(s) | 20, 225 |
| SspMI | CTAG | 4 cut(s) | 140, 182, 197, 291 |
| TaaI | ACNGT | 1 cut(s) | 218 |
| TaiI | ACGT | 1 cut(s) | 317 |
| TaqII | GACCGA | 1 cut(s) | 81 |
| TasI | AATT | 1 cut(s) | 131 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TfiI | GAWTC | 1 cut(s) | 86 |
| TspDTI | ATGAA | 1 cut(s) | 285 |
| VpaK11BI | GGWCC | 1 cut(s) | 241 |
| XapI | RAATTY | 1 cut(s) | 131 |
| XbaI | TCTAGA | 2 cut(s) | 139, 181 |
| XceI | RCATGY | 1 cut(s) | 75 |
| XspI | CTAG | 4 cut(s) | 140, 182, 197, 291 |