Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 21 - 94 | 2.7e-09 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 283 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 44 |
| AgsI | TTSAA | 2 cut(s) | 55, 90 |
| AjnI | CCWGG | 1 cut(s) | 267 |
| AluBI | AGCT | 2 cut(s) | 179, 200 |
| AluI | AGCT | 2 cut(s) | 179, 200 |
| Alw26I | GTCTC | 1 cut(s) | 251 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| AoxI | GGCC | 1 cut(s) | 12 |
| ApeKI | GCWGC | 3 cut(s) | 31, 74, 146 |
| AspS9I | GGNCC | 1 cut(s) | 12 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| AsuNHI | GCTAGC | 1 cut(s) | 196 |
| BanI | GGYRCC | 1 cut(s) | 283 |
| BbvI | GCAGC | 3 cut(s) | 43, 86, 133 |
| BccI | CCATC | 2 cut(s) | 62, 214 |
| BciT130I | CCWGG | 1 cut(s) | 269 |
| BciVI | GTATCC | 1 cut(s) | 177 |
| BcoDI | GTCTC | 1 cut(s) | 251 |
| BfaI | CTAG | 1 cut(s) | 197 |
| BfuI | GTATCC | 1 cut(s) | 177 |
| BisI | GCNGC | 3 cut(s) | 32, 75, 147 |
| BlsI | GCNGC | 3 cut(s) | 33, 76, 148 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| BmgT120I | GGNCC | 1 cut(s) | 12 |
| BmiI | GGNNCC | 2 cut(s) | 13, 285 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| BmtI | GCTAGC | 1 cut(s) | 200 |
| Bsa29I | ATCGAT | 1 cut(s) | 94 |
| BsaAI | YACGTR | 1 cut(s) | 242 |
| BsaJI | CCNNGG | 2 cut(s) | 38, 268 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 34, 64 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 44 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseBI | CCWGG | 1 cut(s) | 269 |
| BseCI | ATCGAT | 1 cut(s) | 94 |
| BseDI | CCNNGG | 2 cut(s) | 38, 268 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 44 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BseXI | GCAGC | 3 cut(s) | 43, 86, 133 |
| BseYI | CCCAGC | 1 cut(s) | 149 |
| BsgI | GTGCAG | 1 cut(s) | 93 |
| BshFI | GGCC | 1 cut(s) | 14 |
| BshNI | GGYRCC | 1 cut(s) | 283 |
| BshVI | ATCGAT | 1 cut(s) | 94 |
| BsiSI | CCGG | 1 cut(s) | 15 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 44 |
| BsmAI | GTCTC | 1 cut(s) | 251 |
| BsnI | GGCC | 1 cut(s) | 14 |
| BspANI | GGCC | 1 cut(s) | 14 |
| BspDI | ATCGAT | 1 cut(s) | 94 |
| BspLI | GGNNCC | 2 cut(s) | 13, 285 |
| BspOI | GCTAGC | 1 cut(s) | 200 |
| BspT107I | GGYRCC | 1 cut(s) | 283 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BssECI | CCNNGG | 2 cut(s) | 38, 268 |
| BssT1I | CCWWGG | 1 cut(s) | 38 |
| Bst2UI | CCWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstBAI | YACGTR | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 1 cut(s) | 198 |
| BstMAI | GTCTC | 1 cut(s) | 251 |
| BstNI | CCWGG | 1 cut(s) | 269 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstV1I | GCAGC | 3 cut(s) | 43, 86, 133 |
| Bsu15I | ATCGAT | 1 cut(s) | 94 |
| BsuI | GTATCC | 1 cut(s) | 177 |
| BsuRI | GGCC | 1 cut(s) | 14 |
| BsuTUI | ATCGAT | 1 cut(s) | 94 |
| Cac8I | GCNNGC | 1 cut(s) | 198 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| Cfr13I | GGNCC | 1 cut(s) | 12 |
| ClaI | ATCGAT | 1 cut(s) | 94 |
| CviJI | RGCY | 7 cut(s) | 14, 34, 77, 134, 146, 179, 200 |
| CviKI_1 | RGCY | 7 cut(s) | 14, 34, 77, 134, 146, 179, 200 |
| Eco130I | CCWWGG | 1 cut(s) | 38 |
| EcoRII | CCWGG | 1 cut(s) | 267 |
| EcoT14I | CCWWGG | 1 cut(s) | 38 |
| ErhI | CCWWGG | 1 cut(s) | 38 |
| FaiI | YATR | 2 cut(s) | 24, 99 |
| Fnu4HI | GCNGC | 3 cut(s) | 32, 75, 147 |
| Fsp4HI | GCNGC | 3 cut(s) | 32, 75, 147 |
| FspBI | CTAG | 1 cut(s) | 197 |
| GluI | GCNGC | 3 cut(s) | 32, 75, 147 |
| GsaI | CCCAGC | 1 cut(s) | 153 |
| HaeIII | GGCC | 1 cut(s) | 14 |
| HapII | CCGG | 1 cut(s) | 15 |
| HpaII | CCGG | 1 cut(s) | 15 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 239 |
| Hpy188I | TCNGA | 2 cut(s) | 82, 190 |
| Hpy8I | GTNNAC | 1 cut(s) | 239 |
| HpyAV | CCTTC | 1 cut(s) | 220 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4IV | ACGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| HpySE526I | ACGT | 1 cut(s) | 241 |
| LpnPI | CCDG | 7 cut(s) | 28, 135, 183, 254, 281, 282, 300 |
| Lsp1109I | GCAGC | 3 cut(s) | 43, 86, 133 |
| MaeI | CTAG | 1 cut(s) | 197 |
| MaeII | ACGT | 1 cut(s) | 241 |
| MluCI | AATT | 1 cut(s) | 125 |
| MnlI | CCTC | 7 cut(s) | 36, 45, 88, 111, 203, 227, 274 |
| MseI | TTAA | 1 cut(s) | 204 |
| MspI | CCGG | 1 cut(s) | 15 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| MvaI | CCWGG | 1 cut(s) | 269 |
| NheI | GCTAGC | 1 cut(s) | 196 |
| NlaIV | GGNNCC | 2 cut(s) | 13, 285 |
| PkrI | GCNGC | 3 cut(s) | 33, 76, 148 |
| Ppu21I | YACGTR | 1 cut(s) | 242 |
| Psp6I | CCWGG | 1 cut(s) | 267 |
| PspFI | CCCAGC | 1 cut(s) | 149 |
| PspGI | CCWGG | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 2 cut(s) | 13, 285 |
| PspPI | GGNCC | 1 cut(s) | 12 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 1 cut(s) | 204 |
| SatI | GCNGC | 3 cut(s) | 32, 75, 147 |
| Sau96I | GGNCC | 1 cut(s) | 12 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SetI | ASST | 7 cut(s) | 10, 122, 181, 202, 238, 244, 285 |
| Sse9I | AATT | 1 cut(s) | 125 |
| SspMI | CTAG | 1 cut(s) | 197 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| StyI | CCWWGG | 1 cut(s) | 38 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaiI | ACGT | 1 cut(s) | 244 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 1 cut(s) | 125 |
| Tru1I | TTAA | 1 cut(s) | 204 |
| Tru9I | TTAA | 1 cut(s) | 204 |
| TseI | GCWGC | 3 cut(s) | 31, 74, 146 |
| XspI | CTAG | 1 cut(s) | 197 |