ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 133, 291 |
| AgsI | TTSAA | 3 cut(s) | 13, 268, 326 |
| AluBI | AGCT | 3 cut(s) | 89, 166, 378 |
| AluI | AGCT | 3 cut(s) | 89, 166, 378 |
| Alw26I | GTCTC | 1 cut(s) | 348 |
| Ama87I | CYCGRG | 1 cut(s) | 161 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 330 |
| AvaI | CYCGRG | 1 cut(s) | 161 |
| BccI | CCATC | 1 cut(s) | 77 |
| BclI | TGATCA | 1 cut(s) | 67 |
| BcoDI | GTCTC | 1 cut(s) | 348 |
| BfmI | CTRYAG | 1 cut(s) | 379 |
| BmcAI | AGTACT | 1 cut(s) | 291 |
| BmeT110I | CYCGRG | 1 cut(s) | 161 |
| BmsI | GCATC | 1 cut(s) | 286 |
| BseMII | CTCAG | 2 cut(s) | 144, 286 |
| BseRI | GAGGAG | 1 cut(s) | 300 |
| BsiHKCI | CYCGRG | 1 cut(s) | 161 |
| BsmAI | GTCTC | 1 cut(s) | 348 |
| BsoBI | CYCGRG | 1 cut(s) | 161 |
| Bsp143I | GATC | 1 cut(s) | 67 |
| BspCNI | CTCAG | 2 cut(s) | 145, 285 |
| BssMI | GATC | 1 cut(s) | 67 |
| Bst4CI | ACNGT | 2 cut(s) | 183, 383 |
| BstC8I | GCNNGC | 1 cut(s) | 191 |
| BstDEI | CTNAG | 2 cut(s) | 153, 272 |
| BstKTI | GATC | 1 cut(s) | 70 |
| BstMAI | GTCTC | 1 cut(s) | 348 |
| BstMBI | GATC | 1 cut(s) | 67 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 107, 155 |
| BstNSI | RCATGY | 1 cut(s) | 346 |
| BstSFI | CTRYAG | 1 cut(s) | 379 |
| BtsIMutI | CAGTG | 1 cut(s) | 280 |
| Cac8I | GCNNGC | 1 cut(s) | 191 |
| Csp6I | GTAC | 2 cut(s) | 132, 290 |
| CviAII | CATG | 3 cut(s) | 222, 335, 343 |
| CviJI | RGCY | 6 cut(s) | 89, 101, 116, 166, 178, 378 |
| CviKI_1 | RGCY | 6 cut(s) | 89, 101, 116, 166, 178, 378 |
| CviQI | GTAC | 2 cut(s) | 132, 290 |
| DdeI | CTNAG | 2 cut(s) | 153, 272 |
| DpnI | GATC | 1 cut(s) | 69 |
| DpnII | GATC | 1 cut(s) | 67 |
| Eco88I | CYCGRG | 1 cut(s) | 161 |
| EcoT22I | ATGCAT | 1 cut(s) | 301 |
| FaeI | CATG | 3 cut(s) | 225, 338, 346 |
| FaiI | YATR | 6 cut(s) | 119, 223, 239, 336, 344, 374 |
| FatI | CATG | 3 cut(s) | 221, 334, 342 |
| FbaI | TGATCA | 1 cut(s) | 67 |
| Hin1II | CATG | 3 cut(s) | 225, 338, 346 |
| HinfI | GANTC | 2 cut(s) | 227, 268 |
| HpyCH4III | ACNGT | 2 cut(s) | 183, 383 |
| HpyCH4V | TGCA | 5 cut(s) | 46, 149, 189, 221, 299 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 107, 155 |
| HpyF3I | CTNAG | 2 cut(s) | 153, 272 |
| Hsp92II | CATG | 3 cut(s) | 225, 338, 346 |
| Ksp22I | TGATCA | 1 cut(s) | 67 |
| Kzo9I | GATC | 1 cut(s) | 67 |
| LmnI | GCTCC | 1 cut(s) | 86 |
| LpnPI | CCDG | 1 cut(s) | 175 |
| LweI | GCATC | 1 cut(s) | 286 |
| MaeIII | GTNAC | 1 cut(s) | 275 |
| MalI | GATC | 1 cut(s) | 69 |
| MboI | GATC | 1 cut(s) | 67 |
| MfeI | CAATTG | 1 cut(s) | 123 |
| MluCI | AATT | 3 cut(s) | 7, 123, 365 |
| MmeI | TCCRAC | 1 cut(s) | 231 |
| MnlI | CCTC | 3 cut(s) | 54, 148, 278 |
| Mph1103I | ATGCAT | 1 cut(s) | 301 |
| MroXI | GAANNNNTTC | 1 cut(s) | 330 |
| MseI | TTAA | 1 cut(s) | 234 |
| MunI | CAATTG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 107, 155 |
| NdeII | GATC | 1 cut(s) | 67 |
| NlaIII | CATG | 3 cut(s) | 225, 338, 346 |
| NmuCI | GTSAC | 1 cut(s) | 275 |
| NsiI | ATGCAT | 1 cut(s) | 301 |
| NspI | RCATGY | 1 cut(s) | 346 |
| PaeR7I | CTCGAG | 1 cut(s) | 161 |
| PdmI | GAANNNNTTC | 1 cut(s) | 330 |
| PfeI | GAWTC | 2 cut(s) | 227, 268 |
| PspXI | VCTCGAGB | 1 cut(s) | 161 |
| RsaI | GTAC | 2 cut(s) | 133, 291 |
| RsaNI | GTAC | 2 cut(s) | 132, 290 |
| SaqAI | TTAA | 1 cut(s) | 234 |
| Sau3AI | GATC | 1 cut(s) | 67 |
| ScaI | AGTACT | 1 cut(s) | 291 |
| SetI | ASST | 5 cut(s) | 65, 91, 109, 168, 380 |
| SfaNI | GCATC | 1 cut(s) | 286 |
| SfcI | CTRYAG | 1 cut(s) | 379 |
| Sfr274I | CTCGAG | 1 cut(s) | 161 |
| SlaI | CTCGAG | 1 cut(s) | 161 |
| SmlI | CTYRAG | 1 cut(s) | 161 |
| SmoI | CTYRAG | 1 cut(s) | 161 |
| Sse9I | AATT | 3 cut(s) | 7, 123, 365 |
| TaaI | ACNGT | 2 cut(s) | 183, 383 |
| TaqI | TCGA | 2 cut(s) | 143, 162 |
| TasI | AATT | 3 cut(s) | 7, 123, 365 |
| TatI | WGTACW | 2 cut(s) | 131, 289 |
| TfiI | GAWTC | 2 cut(s) | 227, 268 |
| Tru1I | TTAA | 1 cut(s) | 234 |
| Tru9I | TTAA | 1 cut(s) | 234 |
| TscAI | CASTG | 1 cut(s) | 280 |
| TseFI | GTSAC | 1 cut(s) | 275 |
| Tsp45I | GTSAC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 1 cut(s) | 323 |
| TspGWI | ACGGA | 1 cut(s) | 377 |
| TspRI | CASTG | 1 cut(s) | 280 |
| XceI | RCATGY | 1 cut(s) | 346 |
| XhoI | CTCGAG | 1 cut(s) | 161 |
| XmnI | GAANNNNTTC | 1 cut(s) | 330 |
| ZrmI | AGTACT | 1 cut(s) | 291 |
| Zsp2I | ATGCAT | 1 cut(s) | 301 |