Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 55 - 167 | 9.4e-09 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 515 |
| Acc36I | ACCTGC | 1 cut(s) | 496 |
| AccI | GTMKAC | 2 cut(s) | 50, 140 |
| AcsI | RAATTY | 2 cut(s) | 57, 97 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 361 |
| AflIII | ACRYGT | 1 cut(s) | 346 |
| AgsI | TTSAA | 2 cut(s) | 320, 473 |
| AjiI | CACGTC | 1 cut(s) | 200 |
| AluBI | AGCT | 1 cut(s) | 287 |
| AluI | AGCT | 1 cut(s) | 287 |
| Alw26I | GTCTC | 2 cut(s) | 15, 486 |
| ApeKI | GCWGC | 1 cut(s) | 302 |
| ApoI | RAATTY | 2 cut(s) | 57, 97 |
| AseI | ATTAAT | 1 cut(s) | 162 |
| AspLEI | GCGC | 2 cut(s) | 516, 537 |
| BanII | GRGCYC | 1 cut(s) | 427 |
| BauI | CACGAG | 1 cut(s) | 394 |
| BbvI | GCAGC | 1 cut(s) | 289 |
| BccI | CCATC | 4 cut(s) | 164, 224, 355, 413 |
| BceAI | ACGGC | 1 cut(s) | 362 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 281, 315 |
| BcoDI | GTCTC | 2 cut(s) | 15, 486 |
| BfmI | CTRYAG | 1 cut(s) | 84 |
| BfuAI | ACCTGC | 1 cut(s) | 496 |
| BisI | GCNGC | 1 cut(s) | 303 |
| BlpI | GCTNAGC | 1 cut(s) | 527 |
| BlsI | GCNGC | 1 cut(s) | 304 |
| BmgBI | CACGTC | 1 cut(s) | 200 |
| BmsI | GCATC | 1 cut(s) | 355 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 527 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 361 |
| BseGI | GGATG | 6 cut(s) | 129, 181, 235, 370, 418, 424 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 361 |
| BseRI | GAGGAG | 2 cut(s) | 148, 474 |
| BseXI | GCAGC | 1 cut(s) | 289 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 361 |
| BsmAI | GTCTC | 2 cut(s) | 15, 486 |
| Bsp1286I | GDGCHC | 1 cut(s) | 427 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 527 |
| BspMI | ACCTGC | 1 cut(s) | 496 |
| BssNAI | GTATAC | 1 cut(s) | 141 |
| BssSI | CACGAG | 1 cut(s) | 394 |
| Bst1107I | GTATAC | 1 cut(s) | 141 |
| Bst2BI | CACGAG | 1 cut(s) | 394 |
| Bst4CI | ACNGT | 1 cut(s) | 85 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 511 |
| BstC8I | GCNNGC | 1 cut(s) | 533 |
| BstDEI | CTNAG | 2 cut(s) | 206, 527 |
| BstF5I | GGATG | 6 cut(s) | 129, 181, 235, 370, 418, 424 |
| BstHHI | GCGC | 2 cut(s) | 516, 537 |
| BstMAI | GTCTC | 2 cut(s) | 15, 486 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 374, 511, 532 |
| BstNSI | RCATGY | 3 cut(s) | 350, 520, 535 |
| BstSFI | CTRYAG | 1 cut(s) | 84 |
| BstV1I | GCAGC | 1 cut(s) | 289 |
| BstZ17I | GTATAC | 1 cut(s) | 141 |
| BtrI | CACGTC | 1 cut(s) | 200 |
| BtsCI | GGATG | 6 cut(s) | 129, 181, 235, 370, 418, 424 |
| BtsIMutI | CAGTG | 1 cut(s) | 81 |
| BveI | ACCTGC | 1 cut(s) | 496 |
| Cac8I | GCNNGC | 1 cut(s) | 533 |
| CfoI | GCGC | 2 cut(s) | 516, 537 |
| CviAII | CATG | 4 cut(s) | 347, 491, 517, 532 |
| CviJI | RGCY | 3 cut(s) | 287, 377, 425 |
| CviKI_1 | RGCY | 3 cut(s) | 287, 377, 425 |
| DdeI | CTNAG | 2 cut(s) | 206, 527 |
| DraI | TTTAAA | 1 cut(s) | 256 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco24I | GRGCYC | 1 cut(s) | 427 |
| EcoT38I | GRGCYC | 1 cut(s) | 427 |
| FaeI | CATG | 4 cut(s) | 350, 494, 520, 535 |
| FatI | CATG | 4 cut(s) | 346, 490, 516, 531 |
| FblI | GTMKAC | 2 cut(s) | 50, 140 |
| Fnu4HI | GCNGC | 1 cut(s) | 303 |
| FokI | GGATG | 6 cut(s) | 136, 188, 242, 377, 425, 431 |
| FriOI | GRGCYC | 1 cut(s) | 427 |
| Fsp4HI | GCNGC | 1 cut(s) | 303 |
| FspAI | RTGCGCAY | 1 cut(s) | 515 |
| FspI | TGCGCA | 1 cut(s) | 515 |
| GlaI | GCGC | 2 cut(s) | 515, 536 |
| GluI | GCNGC | 1 cut(s) | 303 |
| HhaI | GCGC | 2 cut(s) | 516, 537 |
| Hin1II | CATG | 4 cut(s) | 350, 494, 520, 535 |
| Hin6I | GCGC | 2 cut(s) | 514, 535 |
| HinP1I | GCGC | 2 cut(s) | 514, 535 |
| HinfI | GANTC | 1 cut(s) | 47 |
| Hpy166II | GTNNAC | 2 cut(s) | 51, 141 |
| Hpy188III | TCNNGA | 2 cut(s) | 121, 157 |
| Hpy8I | GTNNAC | 2 cut(s) | 51, 141 |
| HpyAV | CCTTC | 1 cut(s) | 427 |
| HpyCH4III | ACNGT | 1 cut(s) | 85 |
| HpyCH4IV | ACGT | 2 cut(s) | 143, 199 |
| HpyCH4V | TGCA | 4 cut(s) | 305, 368, 387, 505 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 374, 511, 532 |
| HpyF3I | CTNAG | 2 cut(s) | 206, 527 |
| HpySE526I | ACGT | 2 cut(s) | 143, 199 |
| Hsp92II | CATG | 4 cut(s) | 350, 494, 520, 535 |
| HspAI | GCGC | 2 cut(s) | 514, 535 |
| LpnPI | CCDG | 3 cut(s) | 106, 397, 491 |
| Lsp1109I | GCAGC | 1 cut(s) | 289 |
| LweI | GCATC | 1 cut(s) | 355 |
| MaeII | ACGT | 2 cut(s) | 143, 199 |
| MaeIII | GTNAC | 2 cut(s) | 79, 338 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MhlI | GDGCHC | 1 cut(s) | 427 |
| MluCI | AATT | 9 cut(s) | 30, 57, 97, 181, 271, 293, 306, 406, 499 |
| MlyI | GAGTC | 1 cut(s) | 56 |
| MnlI | CCTC | 7 cut(s) | 123, 126, 129, 329, 403, 475, 495 |
| MseI | TTAA | 5 cut(s) | 36, 162, 180, 255, 440 |
| MunI | CAATTG | 1 cut(s) | 30 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 374, 511, 532 |
| NlaIII | CATG | 4 cut(s) | 350, 494, 520, 535 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| NsbI | TGCGCA | 1 cut(s) | 515 |
| NspI | RCATGY | 3 cut(s) | 350, 520, 535 |
| PaeI | GCATGC | 1 cut(s) | 535 |
| PciI | ACATGT | 1 cut(s) | 346 |
| PflFI | GACNNNGTC | 1 cut(s) | 201 |
| PkrI | GCNGC | 1 cut(s) | 304 |
| PleI | GAGTC | 1 cut(s) | 55 |
| PpsI | GAGTC | 1 cut(s) | 55 |
| PscI | ACATGT | 1 cut(s) | 346 |
| PshBI | ATTAAT | 1 cut(s) | 162 |
| PsyI | GACNNNGTC | 1 cut(s) | 201 |
| SaqAI | TTAA | 5 cut(s) | 36, 162, 180, 255, 440 |
| SatI | GCNGC | 1 cut(s) | 303 |
| SchI | GAGTC | 1 cut(s) | 56 |
| SduI | GDGCHC | 1 cut(s) | 427 |
| SetI | ASST | 8 cut(s) | 81, 140, 146, 202, 289, 340, 467, 510 |
| SfaNI | GCATC | 1 cut(s) | 355 |
| SfcI | CTRYAG | 1 cut(s) | 84 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| SphI | GCATGC | 1 cut(s) | 535 |
| Sse9I | AATT | 9 cut(s) | 30, 57, 97, 181, 271, 293, 306, 406, 499 |
| TaaI | ACNGT | 1 cut(s) | 85 |
| TaiI | ACGT | 2 cut(s) | 146, 202 |
| TasI | AATT | 9 cut(s) | 30, 57, 97, 181, 271, 293, 306, 406, 499 |
| Tru1I | TTAA | 5 cut(s) | 36, 162, 180, 255, 440 |
| Tru9I | TTAA | 5 cut(s) | 36, 162, 180, 255, 440 |
| TscAI | CASTG | 1 cut(s) | 88 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| TseI | GCWGC | 1 cut(s) | 302 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspDTI | ATGAA | 5 cut(s) | 50, 110, 142, 417, 446 |
| TspRI | CASTG | 1 cut(s) | 88 |
| Tth111I | GACNNNGTC | 1 cut(s) | 201 |
| VspI | ATTAAT | 1 cut(s) | 162 |
| XapI | RAATTY | 2 cut(s) | 57, 97 |
| XceI | RCATGY | 3 cut(s) | 350, 520, 535 |
| XmiI | GTMKAC | 2 cut(s) | 50, 140 |