DEAD-box ATP-dependent RNA helicase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 2 cut(s) | 41, 175 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 212, 213 |
| AgsI | TTSAA | 3 cut(s) | 26, 73, 179 |
| AjnI | CCWGG | 1 cut(s) | 82 |
| AluBI | AGCT | 3 cut(s) | 22, 103, 125 |
| AluI | AGCT | 3 cut(s) | 22, 103, 125 |
| Alw21I | GWGCWC | 1 cut(s) | 105 |
| AoxI | GGCC | 1 cut(s) | 288 |
| AspLEI | GCGC | 1 cut(s) | 197 |
| AspS9I | GGNCC | 1 cut(s) | 86 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| AvaII | GGWCC | 1 cut(s) | 86 |
| BanII | GRGCYC | 2 cut(s) | 105, 135 |
| Bbv12I | GWGCWC | 1 cut(s) | 105 |
| BciT130I | CCWGG | 1 cut(s) | 84 |
| BfaI | CTAG | 2 cut(s) | 171, 266 |
| BfmI | CTRYAG | 1 cut(s) | 258 |
| BglII | AGATCT | 1 cut(s) | 262 |
| Bme1390I | CCNGG | 1 cut(s) | 84 |
| Bme18I | GGWCC | 1 cut(s) | 86 |
| BmgT120I | GGNCC | 1 cut(s) | 86 |
| BmiI | GGNNCC | 1 cut(s) | 236 |
| BmrFI | CCNGG | 1 cut(s) | 84 |
| BmsI | GCATC | 1 cut(s) | 31 |
| Bpu10I | CCTNAGC | 1 cut(s) | 104 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 212, 213 |
| BseBI | CCWGG | 1 cut(s) | 84 |
| BseGI | GGATG | 1 cut(s) | 294 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 212, 213 |
| BseMII | CTCAG | 1 cut(s) | 118 |
| BshFI | GGCC | 1 cut(s) | 290 |
| BsiHKAI | GWGCWC | 1 cut(s) | 105 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 212, 213 |
| BsnI | GGCC | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 2 cut(s) | 105, 135 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| BspANI | GGCC | 1 cut(s) | 290 |
| BspCNI | CTCAG | 1 cut(s) | 117 |
| BspLI | GGNNCC | 1 cut(s) | 236 |
| BssMI | GATC | 1 cut(s) | 262 |
| Bst2UI | CCWGG | 1 cut(s) | 84 |
| Bst6I | CTCTTC | 2 cut(s) | 2, 194 |
| BstC8I | GCNNGC | 1 cut(s) | 123 |
| BstDEI | CTNAG | 1 cut(s) | 104 |
| BstF5I | GGATG | 1 cut(s) | 294 |
| BstHHI | GCGC | 1 cut(s) | 197 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstNI | CCWGG | 1 cut(s) | 84 |
| BstSCI | CCNGG | 1 cut(s) | 82 |
| BstSFI | CTRYAG | 1 cut(s) | 258 |
| BstX2I | RGATCY | 1 cut(s) | 262 |
| BstYI | RGATCY | 1 cut(s) | 262 |
| BsuRI | GGCC | 1 cut(s) | 290 |
| BtsCI | GGATG | 1 cut(s) | 294 |
| Cac8I | GCNNGC | 1 cut(s) | 123 |
| CfoI | GCGC | 1 cut(s) | 197 |
| Cfr13I | GGNCC | 1 cut(s) | 86 |
| CviAII | CATG | 1 cut(s) | 299 |
| CviJI | RGCY | 5 cut(s) | 22, 103, 125, 133, 290 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 103, 125, 133, 290 |
| DdeI | CTNAG | 1 cut(s) | 104 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| Eam1104I | CTCTTC | 2 cut(s) | 2, 194 |
| EarI | CTCTTC | 2 cut(s) | 2, 194 |
| Ecl136II | GAGCTC | 1 cut(s) | 103 |
| Eco24I | GRGCYC | 2 cut(s) | 105, 135 |
| Eco47I | GGWCC | 1 cut(s) | 86 |
| Eco53kI | GAGCTC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 2 cut(s) | 41, 175 |
| EcoICRI | GAGCTC | 1 cut(s) | 103 |
| EcoRII | CCWGG | 1 cut(s) | 82 |
| EcoT38I | GRGCYC | 2 cut(s) | 105, 135 |
| FaeI | CATG | 1 cut(s) | 302 |
| FaiI | YATR | 5 cut(s) | 14, 146, 300, 309, 324 |
| FatI | CATG | 1 cut(s) | 298 |
| FokI | GGATG | 1 cut(s) | 281 |
| FriOI | GRGCYC | 2 cut(s) | 105, 135 |
| FspBI | CTAG | 2 cut(s) | 171, 266 |
| GlaI | GCGC | 1 cut(s) | 196 |
| HaeIII | GGCC | 1 cut(s) | 290 |
| HhaI | GCGC | 1 cut(s) | 197 |
| Hin1II | CATG | 1 cut(s) | 302 |
| Hin6I | GCGC | 1 cut(s) | 195 |
| HinP1I | GCGC | 1 cut(s) | 195 |
| HindIII | AAGCTT | 1 cut(s) | 20 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 3 cut(s) | 37, 60, 247 |
| Hpy188III | TCNNGA | 2 cut(s) | 73, 228 |
| HpyAV | CCTTC | 3 cut(s) | 91, 225, 280 |
| HpyCH4V | TGCA | 1 cut(s) | 113 |
| HpyF3I | CTNAG | 1 cut(s) | 104 |
| Hsp92II | CATG | 1 cut(s) | 302 |
| HspAI | GCGC | 1 cut(s) | 195 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 5 cut(s) | 69, 91, 96, 135, 241 |
| LweI | GCATC | 1 cut(s) | 31 |
| MaeI | CTAG | 2 cut(s) | 171, 266 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 3 cut(s) | 19, 181, 308 |
| MflI | RGATCY | 1 cut(s) | 262 |
| MhlI | GDGCHC | 2 cut(s) | 105, 135 |
| MluCI | AATT | 3 cut(s) | 26, 90, 141 |
| MnlI | CCTC | 2 cut(s) | 24, 217 |
| MseI | TTAA | 3 cut(s) | 93, 240, 328 |
| MspR9I | CCNGG | 1 cut(s) | 84 |
| MvaI | CCWGG | 1 cut(s) | 84 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 1 cut(s) | 302 |
| NlaIV | GGNNCC | 1 cut(s) | 236 |
| Psp124BI | GAGCTC | 1 cut(s) | 105 |
| Psp6I | CCWGG | 1 cut(s) | 82 |
| PspGI | CCWGG | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 236 |
| PspPI | GGNCC | 1 cut(s) | 86 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 159, 191 |
| PsuI | RGATCY | 1 cut(s) | 262 |
| SacI | GAGCTC | 1 cut(s) | 105 |
| SaqAI | TTAA | 3 cut(s) | 93, 240, 328 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| Sau96I | GGNCC | 1 cut(s) | 86 |
| ScrFI | CCNGG | 1 cut(s) | 84 |
| SduI | GDGCHC | 2 cut(s) | 105, 135 |
| SetI | ASST | 7 cut(s) | 24, 35, 105, 127, 159, 203, 236 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| SfcI | CTRYAG | 1 cut(s) | 258 |
| SinI | GGWCC | 1 cut(s) | 86 |
| Sse9I | AATT | 3 cut(s) | 26, 90, 141 |
| SspI | AATATT | 1 cut(s) | 223 |
| SspMI | CTAG | 2 cut(s) | 171, 266 |
| SstI | GAGCTC | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 82 |
| TasI | AATT | 3 cut(s) | 26, 90, 141 |
| Tru1I | TTAA | 3 cut(s) | 93, 240, 328 |
| Tru9I | TTAA | 3 cut(s) | 93, 240, 328 |
| TspDTI | ATGAA | 2 cut(s) | 291, 299 |
| VpaK11BI | GGWCC | 1 cut(s) | 86 |
| XspI | CTAG | 2 cut(s) | 171, 266 |