Rorug05G0411900

UDP-glycosyltransferase 87A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000072
Physical Location & Seq
Forward (+)
56906352 .. 56910765
4414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0411900.1

Sequence Viewer

Length: 1821 bp
ATGCTTCGAGGCGGTCGAGAGGGCTCGAGCGCGCTAAGCTGCAGTGAGGTTTTGATAATGTCTAGCCCAAGAAGCTTGTCTGTTCGCACACCATCTGAGATTAGAAAGAAGAAGGTTGGTGGGCAGAGAAACCAAGAGGAGCTTGAAAGAGAGGTCTCTTTGCTTCAAAGACTGTTAAATCAAGAAGAGAAAGTACATGAGGTTTTGGACTATGCCTACAGTCGGAAAACTTCCGAGTCTGCTTCTGCTATTCGAATTCCAAGATTCCTTCCCCAGAAGACGAAGGAACTTTTAGCAGAGTTGGATATGGTTGAAGGAGAAATTTCTCGACTTGAAGACCAAATCAGACAACTTAAACTAGGACTGCAACAGGAAGAACAAGCTACTAAGGAATCAAAGGCTCGACAATGGCAACATGATGAAAACCTAAGCCATAGGAACAGAGGTGTTCATCATGAGAGAAAAGGATATGAAACCAAGGCATTGCATTTCATAAGTAAAGCTATAAAGGGTGATTATGAACTTAATAATGAACTCAATTTAAACGAGAAAATGGAAAACTTGAGAAGTTTTTCTGATCAGAAAGAAAATTACTTCTATGAGGAGGTTAGACTTCAGTCTAAGGTTCCACGGAAAGGCGGATTGTTAAGAACACCATCACCCTTGCGAACTCTGAGACATCCATCAGCACCAAAGCTGAGAGAAGTTAAACCAGGCATTTCTTCAGATCATCTCCCACCAAAACCTGTACCAATTCCAACACAATTAGAAGAGAACAACCAGATTTGGCAACCAAACAAGCTCTCAGAGGAAATTTTGAAGTGTCTCAACCTCATTTATGTTAGGCTGCTTAGAACAACCAGAACAATGGAATTGGAGAAATCAGGCCCCATTTCCAGGTCTTTGCACTCTTCTGTTGTAACCTCAAGGAGCTTCAGGGATGATACCAGCCTAACCTCCAAGTCAAGCCTTCTGTTACAGAAGGAATCAAGGCAACAAGACCCTTATGGTATCTTCAATGTGGAAGACTCTATTCCTAGGGATATTGGCCCTTACAAGAACTTGGTTGTTTTTACCTCAAATTCTATGGACCCAAGATCTATTTCAGCATCGAACTCTATTCCTTTACTAAAAAAGTTGAGGGTATTGCTGAACAATCTCCTGGTTGTGAATTTGGGGTCCTTGGCATACCAGCAGAAGTTAGCATTCTGGATCAACATGTACAATGCTTGTATCATGAATGGCTTTCTCGAATTTGGTGCGCATCCTTCCGCAGACAAATTACTTACATTACTGAACAAGGCAACACTGAACATAGGAGGTAAGATTTTAAATGCTCAATCTATTGAGCATCAGATACTGAGGAAACCAGCACCTTCAATTTCGATGAAAGAGGCTTTCCAGAAGGGTGAGAATGATGATGAGGCCACTGTTCGCCAACTCTATGGTCTTGAGTCCATGGATCCTAATGTCACATTTGCTCTGTGTTGTGGAACTCGTTCTTCTCCAGCAGTGAAGATATACACAGCTGATAGTGTTGTAGCAGAGTTGGAGAAATCAAAGTTGGAGTACTTGCAAGCATCAATTGTAGTGACCAGCACAAAGAAAATTGGATTCCCGGAACTGTTGCTCGGAAACATGCTTGATTTTTCTGTAGATGTGGACTCACTAGTTCAGTGGGCGTGCCACCAGTTACCTACGTCTGGGTCTTTGAGAAAATCAATGGTGGATTGCTTCAGGGGCCATAATGGCGGGAAGATTTCTACCACCGTTGAGAAAATGCCATATGATTTTGAGTTTCATTATCTATTGGCCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

606

Amino Acids

68.66

Weight (kDa)

9.0

Isoelectric Point (pI)

48.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lzipper-MIP1 PF14389 42 - 125 1.9e-18 Leucine-zipper of ternary complex factor MIP1
DUF547 PF04784 394 - 525 2.2e-36 Protein of unknown function, DUF547
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1263
AccII CGCG 1 cut(s) 32
AciI CCGC 4 cut(s) 12, 639, 1272, 1752
AclWI GGATC 3 cut(s) 1220, 1457, 1470
AcoI YGGCCR 1 cut(s) 1812
AcsI RAATTY 6 cut(s) 255, 321, 813, 1081, 1171, 1253
AcuI CTGAAG 4 cut(s) 599, 708, 919, 1720
AfaI GTAC 4 cut(s) 195, 750, 1223, 1571
AfiI CCNNNNNNNGG 4 cut(s) 222, 635, 897, 1703
AflIII ACRYGT 1 cut(s) 1218
AgsI TTSAA 7 cut(s) 146, 167, 314, 335, 820, 1018, 1380
AhlI ACTAGT 1 cut(s) 1669
AjnI CCWGG 3 cut(s) 712, 896, 1161
AjuI GAANNNNNNNTTGG 4 cut(s) 1087, 1119, 1547, 1579
AluBI AGCT 9 cut(s) 39, 75, 142, 383, 503, 697, 802, 933, 1529
AluI AGCT 9 cut(s) 39, 75, 142, 383, 503, 697, 802, 933, 1529
Alw26I GTCTC 3 cut(s) 160, 670, 830
AlwI GGATC 3 cut(s) 1220, 1457, 1470
AlwNI CAGNNNCTG 1 cut(s) 1360
Ama87I CYCGRG 1 cut(s) 25
AoxI GGCC 5 cut(s) 886, 1048, 1425, 1741, 1812
ApeKI GCWGC 2 cut(s) 39, 847
ApoI RAATTY 6 cut(s) 255, 321, 813, 1081, 1171, 1253
Asp700I GAANNNNTTC 2 cut(s) 571, 1498
AspA2I CCTAGG 1 cut(s) 1037
AspLEI GCGC 3 cut(s) 32, 34, 1264
AspS9I GGNCC 5 cut(s) 887, 1049, 1090, 1179, 1741
AsuC2I CCSGG 1 cut(s) 1619
AsuHPI GGTGA 3 cut(s) 524, 651, 1421
AsuII TTCGAA 1 cut(s) 253
AvaI CYCGRG 1 cut(s) 25
AvaII GGWCC 2 cut(s) 1090, 1179
AvrII CCTAGG 1 cut(s) 1037
BalI TGGCCA 1 cut(s) 1814
BamHI GGATCC 1 cut(s) 1462
BanII GRGCYC 1 cut(s) 26
BarI GAAGNNNNNNTAC 2 cut(s) 177, 209
BbsI GAAGAC 3 cut(s) 284, 342, 1032
BbvI GCAGC 2 cut(s) 26, 834
BccI CCATC 3 cut(s) 100, 664, 691
BcgI CGANNNNNNTGC 2 cut(s) 1241, 1275
BciT130I CCWGG 3 cut(s) 714, 898, 1163
BclI TGATCA 1 cut(s) 577
BcnI CCSGG 1 cut(s) 1619
BcoDI GTCTC 3 cut(s) 160, 670, 830
BcuI ACTAGT 1 cut(s) 1669
BfaI CTAG 4 cut(s) 63, 359, 1038, 1670
BfmI CTRYAG 3 cut(s) 40, 217, 1653
BglI GCCNNNNNGGC 1 cut(s) 1749
BglII AGATCT 1 cut(s) 1097
BisI GCNGC 2 cut(s) 40, 848
BlnI CCTAGG 1 cut(s) 1037
BlpI GCTNAGC 1 cut(s) 35
BlsI GCNGC 2 cut(s) 41, 849
BmcAI AGTACT 1 cut(s) 1571
Bme1390I CCNGG 4 cut(s) 714, 898, 1163, 1619
Bme18I GGWCC 2 cut(s) 1090, 1179
BmeT110I CYCGRG 1 cut(s) 25
BmgT120I GGNCC 5 cut(s) 887, 1049, 1090, 1179, 1741
BmiI GGNNCC 6 cut(s) 627, 889, 1092, 1180, 1464, 1742
BmrFI CCNGG 4 cut(s) 714, 898, 1163, 1619
BmsI GCATC 4 cut(s) 1118, 1273, 1360, 1589
BoxI GACNNNNGTC 1 cut(s) 616
BpiI GAAGAC 3 cut(s) 284, 342, 1032
BpmI CTGGAG 1 cut(s) 1491
Bpu10I CCTNAGC 1 cut(s) 428
Bpu1102I GCTNAGC 1 cut(s) 35
Bpu14I TTCGAA 1 cut(s) 253
BpuEI CTTGAG 3 cut(s) 583, 910, 1472
BpuMI CCSGG 1 cut(s) 1619
BsaI GGTCTC 1 cut(s) 160
BsaJI CCNNGG 5 cut(s) 477, 629, 1037, 1182, 1458
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 635, 897, 1703
Bse1I ACTGG 1 cut(s) 1690
Bse3DI GCAATG 1 cut(s) 482
BseBI CCWGG 3 cut(s) 714, 898, 1163
BseDI CCNNGG 5 cut(s) 477, 629, 1037, 1182, 1458
BseGI GGATG 3 cut(s) 679, 946, 1264
BseLI CCNNNNNNNGG 4 cut(s) 222, 635, 897, 1703
BseMI GCAATG 1 cut(s) 482
BseMII CTCAG 5 cut(s) 87, 665, 689, 819, 1352
BseNI ACTGG 1 cut(s) 1690
BsePI GCGCGC 1 cut(s) 30
BseRI GAGGAG 2 cut(s) 152, 617
BseXI GCAGC 2 cut(s) 26, 834
Bsh1236I CGCG 1 cut(s) 32
Bsh1285I CGRYCG 1 cut(s) 16
BshFI GGCC 5 cut(s) 888, 1050, 1427, 1743, 1814
BsiEI CGRYCG 1 cut(s) 16
BsiHKCI CYCGRG 1 cut(s) 25
BsiSI CCGG 1 cut(s) 1619
BslI CCNNNNNNNGG 4 cut(s) 222, 635, 897, 1703
BsmAI GTCTC 3 cut(s) 160, 670, 830
BsmI GAATGC 1 cut(s) 1205
BsnI GGCC 5 cut(s) 888, 1050, 1427, 1743, 1814
Bso31I GGTCTC 1 cut(s) 160
BsoBI CYCGRG 1 cut(s) 25
Bsp119I TTCGAA 1 cut(s) 253
Bsp1286I GDGCHC 1 cut(s) 26
Bsp1407I TGTACA 1 cut(s) 1221
Bsp143I GATC 5 cut(s) 577, 727, 1097, 1212, 1462
Bsp1720I GCTNAGC 1 cut(s) 35
Bsp19I CCATGG 1 cut(s) 1458
BspACI CCGC 4 cut(s) 12, 639, 1272, 1752
BspANI GGCC 5 cut(s) 888, 1050, 1427, 1743, 1814
BspCNI CTCAG 5 cut(s) 88, 666, 690, 818, 1353
BspFNI CGCG 1 cut(s) 32
BspHI TCATGA 2 cut(s) 454, 1236
BspLI GGNNCC 6 cut(s) 627, 889, 1092, 1180, 1464, 1742
BspMAI CTGCAG 1 cut(s) 44
BspPI GGATC 3 cut(s) 1220, 1457, 1470
BspT104I TTCGAA 1 cut(s) 253
BspTNI GGTCTC 1 cut(s) 160
BsrDI GCAATG 1 cut(s) 482
BsrGI TGTACA 1 cut(s) 1221
BsrI ACTGG 1 cut(s) 1690
BssECI CCNNGG 5 cut(s) 477, 629, 1037, 1182, 1458
BssHII GCGCGC 1 cut(s) 30
BssMI GATC 5 cut(s) 577, 727, 1097, 1212, 1462
BssT1I CCWWGG 4 cut(s) 477, 1037, 1182, 1458
Bst2UI CCWGG 3 cut(s) 714, 898, 1163
Bst4CI ACNGT 5 cut(s) 174, 221, 1432, 1626, 1771
Bst6I CTCTTC 3 cut(s) 180, 765, 916
BstAUI TGTACA 1 cut(s) 1221
BstBI TTCGAA 1 cut(s) 253
BstC8I GCNNGC 3 cut(s) 32, 1578, 1684
BstDSI CCRYGG 2 cut(s) 629, 1458
BstF5I GGATG 3 cut(s) 679, 946, 1264
BstFNI CGCG 1 cut(s) 32
BstHHI GCGC 3 cut(s) 32, 34, 1264
BstKTI GATC 5 cut(s) 580, 730, 1100, 1215, 1465
BstMAI GTCTC 3 cut(s) 160, 670, 830
BstMBI GATC 5 cut(s) 577, 727, 1097, 1212, 1462
BstMCI CGRYCG 1 cut(s) 16
BstMWI GCNNNNNNNGC 4 cut(s) 36, 72, 1740, 1749
BstNI CCWGG 3 cut(s) 714, 898, 1163
BstNSI RCATGY 2 cut(s) 1222, 1642
BstPAI GACNNNNGTC 1 cut(s) 616
BstSCI CCNGG 4 cut(s) 712, 896, 1161, 1617
BstSFI CTRYAG 3 cut(s) 40, 217, 1653
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 2 cut(s) 26, 834
BstV2I GAAGAC 3 cut(s) 284, 342, 1032
BstX2I RGATCY 2 cut(s) 1097, 1462
BstXI CCANNNNNNTGG 2 cut(s) 868, 1445
BstYI RGATCY 2 cut(s) 1097, 1462
BsuRI GGCC 5 cut(s) 888, 1050, 1427, 1743, 1814
BtgI CCRYGG 2 cut(s) 629, 1458
BtsCI GGATG 3 cut(s) 679, 946, 1264
BtsI GCAGTG 2 cut(s) 49, 1518
BtsIMutI CAGTG 5 cut(s) 49, 1307, 1428, 1518, 1682
Cac8I GCNNGC 3 cut(s) 32, 1578, 1684
CaiI CAGNNNCTG 1 cut(s) 1360
CciI TCATGA 2 cut(s) 454, 1236
CfoI GCGC 3 cut(s) 32, 34, 1264
Cfr13I GGNCC 5 cut(s) 887, 1049, 1090, 1179, 1741
Csp6I GTAC 4 cut(s) 194, 749, 1222, 1570
CviAII CATG 8 cut(s) 197, 416, 455, 1219, 1237, 1459, 1639, 1816
CviQI GTAC 4 cut(s) 194, 749, 1222, 1570
DpnI GATC 5 cut(s) 579, 729, 1099, 1214, 1464
DpnII GATC 5 cut(s) 577, 727, 1097, 1212, 1462
DraI TTTAAA 2 cut(s) 543, 1332
EaeI YGGCCR 1 cut(s) 1812
Eam1104I CTCTTC 3 cut(s) 180, 765, 916
EarI CTCTTC 3 cut(s) 180, 765, 916
EciI GGCGGA 1 cut(s) 654
Eco130I CCWWGG 4 cut(s) 477, 1037, 1182, 1458
Eco24I GRGCYC 1 cut(s) 26
Eco31I GGTCTC 1 cut(s) 160
Eco47I GGWCC 2 cut(s) 1090, 1179
Eco57I CTGAAG 4 cut(s) 599, 708, 919, 1720
Eco88I CYCGRG 1 cut(s) 25
EcoO109I RGGNCCY 2 cut(s) 887, 1179
EcoRI GAATTC 1 cut(s) 255
EcoRII CCWGG 3 cut(s) 712, 896, 1161
EcoT14I CCWWGG 4 cut(s) 477, 1037, 1182, 1458
EcoT38I GRGCYC 1 cut(s) 26
ErhI CCWWGG 4 cut(s) 477, 1037, 1182, 1458
FaeI CATG 8 cut(s) 200, 419, 458, 1222, 1240, 1462, 1642, 1819
FalI AAGNNNNNCTT 2 cut(s) 126, 158
FatI CATG 8 cut(s) 196, 415, 454, 1218, 1236, 1458, 1638, 1815
FauI CCCGC 1 cut(s) 1745
FauNDI CATATG 1 cut(s) 1786
FbaI TGATCA 1 cut(s) 577
Fnu4HI GCNGC 2 cut(s) 40, 848
FokI GGATG 3 cut(s) 666, 953, 1251
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 2 cut(s) 40, 848
FspAI RTGCGCAY 1 cut(s) 1263
FspBI CTAG 4 cut(s) 63, 359, 1038, 1670
FspI TGCGCA 1 cut(s) 1263
GlaI GCGC 3 cut(s) 31, 33, 1263
GluI GCNGC 2 cut(s) 40, 848
GsuI CTGGAG 1 cut(s) 1491
HaeIII GGCC 5 cut(s) 888, 1050, 1427, 1743, 1814
HapII CCGG 1 cut(s) 1619
HhaI GCGC 3 cut(s) 32, 34, 1264
Hin1II CATG 8 cut(s) 200, 419, 458, 1222, 1240, 1462, 1642, 1819
Hin6I GCGC 3 cut(s) 30, 32, 1262
HinP1I GCGC 3 cut(s) 30, 32, 1262
HindIII AAGCTT 1 cut(s) 73
HinfI GANTC 8 cut(s) 236, 264, 392, 986, 1028, 1454, 1614, 1664
HpaII CCGG 1 cut(s) 1619
HphI GGTGA 3 cut(s) 524, 651, 1421
Hpy166II GTNNAC 1 cut(s) 1663
Hpy188III TCNNGA 9 cut(s) 17, 182, 327, 455, 1210, 1237, 1250, 1402, 1451
Hpy8I GTNNAC 1 cut(s) 1663
HpyAV CCTTC 9 cut(s) 106, 277, 278, 308, 976, 980, 1278, 1386, 1399
HpyCH4III ACNGT 5 cut(s) 174, 221, 1432, 1626, 1771
HpyCH4IV ACGT 1 cut(s) 1700
HpyCH4V TGCA 5 cut(s) 42, 367, 487, 907, 1576
HpyF10VI GCNNNNNNNGC 4 cut(s) 36, 72, 1740, 1749
HpySE526I ACGT 1 cut(s) 1700
Hsp92II CATG 8 cut(s) 200, 419, 458, 1222, 1240, 1462, 1642, 1819
HspAI GCGC 3 cut(s) 30, 32, 1262
Ksp22I TGATCA 1 cut(s) 577
Kzo9I GATC 5 cut(s) 577, 727, 1097, 1212, 1462
LmnI GCTCC 2 cut(s) 139, 930
Lsp1109I GCAGC 2 cut(s) 26, 834
LweI GCATC 4 cut(s) 1118, 1273, 1360, 1589
MaeI CTAG 4 cut(s) 63, 359, 1038, 1670
MaeII ACGT 1 cut(s) 1700
MaeIII GTNAC 5 cut(s) 919, 975, 1471, 1591, 1692
MalI GATC 5 cut(s) 579, 729, 1099, 1214, 1464
MboI GATC 5 cut(s) 577, 727, 1097, 1212, 1462
MfeI CAATTG 1 cut(s) 1584
MflI RGATCY 2 cut(s) 1097, 1462
MhlI GDGCHC 1 cut(s) 26
MlsI TGGCCA 1 cut(s) 1814
MluNI TGGCCA 1 cut(s) 1814
MlyI GAGTC 4 cut(s) 245, 1022, 1463, 1658
MmeI TCCRAC 5 cut(s) 203, 282, 782, 1530, 1545
Mox20I TGGCCA 1 cut(s) 1814
MroXI GAANNNNTTC 2 cut(s) 571, 1498
MscI TGGCCA 1 cut(s) 1814
MseI TTAA 7 cut(s) 176, 354, 525, 542, 647, 708, 1331
Msp20I TGGCCA 1 cut(s) 1814
MspA1I CMGCKG 1 cut(s) 1529
MspI CCGG 1 cut(s) 1619
MspR9I CCNGG 4 cut(s) 714, 898, 1163, 1619
MunI CAATTG 1 cut(s) 1584
Mva1269I GAATGC 1 cut(s) 1205
MvaI CCWGG 3 cut(s) 714, 898, 1163
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 4 cut(s) 36, 72, 1740, 1749
NciI CCSGG 1 cut(s) 1619
NcoI CCATGG 1 cut(s) 1458
NdeI CATATG 1 cut(s) 1786
NdeII GATC 5 cut(s) 577, 727, 1097, 1212, 1462
NlaIII CATG 8 cut(s) 200, 419, 458, 1222, 1240, 1462, 1642, 1819
NlaIV GGNNCC 6 cut(s) 627, 889, 1092, 1180, 1464, 1742
NmuCI GTSAC 2 cut(s) 1471, 1591
NsbI TGCGCA 1 cut(s) 1263
NspI RCATGY 2 cut(s) 1222, 1642
NspV TTCGAA 1 cut(s) 253
PaeR7I CTCGAG 1 cut(s) 25
PagI TCATGA 2 cut(s) 454, 1236
PauI GCGCGC 1 cut(s) 30
PciI ACATGT 1 cut(s) 1218
PcsI WCGNNNNNNNCGW 1 cut(s) 13
PctI GAATGC 1 cut(s) 1205
PdmI GAANNNNTTC 2 cut(s) 571, 1498
PfeI GAWTC 4 cut(s) 264, 392, 986, 1614
PfoI TCCNGGA 1 cut(s) 1617
PkrI GCNGC 2 cut(s) 41, 849
PleI GAGTC 4 cut(s) 244, 1022, 1462, 1658
PpsI GAGTC 4 cut(s) 244, 1022, 1462, 1658
PpuMI RGGWCCY 1 cut(s) 1179
PscI ACATGT 1 cut(s) 1218
PshAI GACNNNNGTC 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 1179
Psp6I CCWGG 3 cut(s) 712, 896, 1161
PspGI CCWGG 3 cut(s) 712, 896, 1161
PspN4I GGNNCC 6 cut(s) 627, 889, 1092, 1180, 1464, 1742
PspPI GGNCC 5 cut(s) 887, 1049, 1090, 1179, 1741
PspPPI RGGWCCY 1 cut(s) 1179
PspXI VCTCGAGB 1 cut(s) 25
PstI CTGCAG 1 cut(s) 44
PstNI CAGNNNCTG 1 cut(s) 1360
PsuI RGATCY 2 cut(s) 1097, 1462
PteI GCGCGC 1 cut(s) 30
PvuII CAGCTG 1 cut(s) 1529
RsaI GTAC 4 cut(s) 195, 750, 1223, 1571
RsaNI GTAC 4 cut(s) 194, 749, 1222, 1570
SaqAI TTAA 7 cut(s) 176, 354, 525, 542, 647, 708, 1331
SatI GCNGC 2 cut(s) 40, 848
Sau3AI GATC 5 cut(s) 577, 727, 1097, 1212, 1462
Sau96I GGNCC 5 cut(s) 887, 1049, 1090, 1179, 1741
ScaI AGTACT 1 cut(s) 1571
SchI GAGTC 4 cut(s) 245, 1022, 1463, 1658
ScrFI CCNGG 4 cut(s) 714, 898, 1163, 1619
SduI GDGCHC 1 cut(s) 26
SfaNI GCATC 4 cut(s) 1118, 1273, 1360, 1589
SfcI CTRYAG 3 cut(s) 40, 217, 1653
Sfr274I CTCGAG 1 cut(s) 25
SfuI TTCGAA 1 cut(s) 253
SinI GGWCC 2 cut(s) 1090, 1179
SlaI CTCGAG 1 cut(s) 25
SmlI CTYRAG 4 cut(s) 25, 562, 925, 1451
SmoI CTYRAG 4 cut(s) 25, 562, 925, 1451
SpeI ACTAGT 1 cut(s) 1669
SsiI CCGC 4 cut(s) 12, 639, 1272, 1752
SspMI CTAG 4 cut(s) 63, 359, 1038, 1670
StyD4I CCNGG 4 cut(s) 712, 896, 1161, 1617
StyI CCWWGG 4 cut(s) 477, 1037, 1182, 1458
TaaI ACNGT 5 cut(s) 174, 221, 1432, 1626, 1771
TaiI ACGT 1 cut(s) 1703
TaqI TCGA 9 cut(s) 7, 16, 26, 253, 328, 403, 1112, 1251, 1385
TatI WGTACW 3 cut(s) 193, 1221, 1569
TfiI GAWTC 4 cut(s) 264, 392, 986, 1614
Tru1I TTAA 7 cut(s) 176, 354, 525, 542, 647, 708, 1331
Tru9I TTAA 7 cut(s) 176, 354, 525, 542, 647, 708, 1331
TscAI CASTG 5 cut(s) 49, 1314, 1435, 1518, 1682
TseFI GTSAC 2 cut(s) 1471, 1591
TseI GCWGC 2 cut(s) 39, 847
Tsp45I GTSAC 2 cut(s) 1471, 1591
TspDTI ATGAA 9 cut(s) 435, 440, 481, 486, 534, 546, 1253, 1403, 1790
TspGWI ACGGA 1 cut(s) 646
TspRI CASTG 5 cut(s) 49, 1314, 1435, 1518, 1682
VpaK11BI GGWCC 2 cut(s) 1090, 1179
XapI RAATTY 6 cut(s) 255, 321, 813, 1081, 1171, 1253
XceI RCATGY 2 cut(s) 1222, 1642
XhoI CTCGAG 1 cut(s) 25
XmaJI CCTAGG 1 cut(s) 1037
XmnI GAANNNNTTC 2 cut(s) 571, 1498
XspI CTAG 4 cut(s) 63, 359, 1038, 1670
ZrmI AGTACT 1 cut(s) 1571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.