FvH4_2g14361

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000072
Physical Location & Seq
Forward (+)
12632775 .. 12637771
4997 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14361.t1

Sequence Viewer

Length: 1245 bp
ATGAGAAAGTTTACTGAAACTCTAGAACCTGTAATAGATTTGACTTGTAATAATATGCTTATGCAACAAGTTATTGATGAGGACATTTTTGAGGCTATTACCTCCATTGGAGCTCTTAAGGCACCAGGACCAGATTACCTACATGCAGATTTTTACCAAAATTGCTGGAATGAGGTTAGTGATACTGTTATTCCTATGATTAAAGCATGTTTCAAGGTTAAAAATCAATTCAAACACCAACAAAAGGTCATTTTTCAAAATTTCTCAAATATCCATAAGGTGCTTGAATCTTTTGCTGAAGCATCAGGTGCTAAAGGGTCACATTGGAGCTGTTGGGAGAGTCTATGTGCTGGAGTAAAGTTGGGGTTTCGGGACTTTGCTCATTTTAACCAACTCTACTTGTTCATGTGGGGGAAGGAATTATTGCTCAAGGGTTTTAGATGGAGAACGGGTAATGGTAGAACTATTAATGTTTCTTGTGACCCATTGCCTGATCTAAATGGCTTCAAAGTGACATATTGTGATGGTACTCCTCTTTCTCTGGTTGTGATTGATTTAATAGATGAGGCTGGGGATGGAAGGTACACTGTGAAGAGTGGTCACTGGTTGGCTAGGAAAGATGCGAGGGAAGCTGTCAATAATGTTAAACATGCGCCACTACATTTCTGGAAGCATTTGTGGAAGCTCAAGATAGGTAGCAGAGTGGCATGCGACGGTAGGAAAGCAAAATGGGAATTGAGGCAAGGGGTGAGTGGATTGACGGTGGTGCATTGGGAGGGGTTGACTATGCATGGAGAAGGGTTGAGGATACATGGAGAGGATTTGGATGGGGAAGGGTTGAATGGAAATGGGAGGCAAAACGTGATGGTGAGAGGGAGGGTTGAAGGTAGAGTGGGTGAAGGTGGTTGGCGGGCCCTAACAAGAGGTAGGCTGAAATGGAATTGTGAAGGTGCAGCTTCTGATAGCTTAGGCCAATATGATTTAGGCTTTATTGTGAGAAATGAGATGGGTGCCATCTTACTGGCTGCTGGGCAGAGAATTGTTCATCTAGTTTCGGTTTTAGTTTCAGAATTATTGGTGATCAAAGCAGGGCTGGAGATGGTGAAGGAGAGAAGTTTAGGGAGTGTTGAAGTGGAGACTGATTGTTTAAACCTTGTGCAGCTTATTAAGCAGAAGGAGAAATGTTTTCCGACAAAAGGTATTTTAGTGGAGGAGATTCAGACTCTTCTAGGAAAGCTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

415

Amino Acids

46.39

Weight (kDa)

8.22

Isoelectric Point (pI)

22.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 314 - 412 4.3e-10 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 121, 1010
AciI CCGC 1 cut(s) 910
AcsI RAATTY 1 cut(s) 259
AcuI CTGAAG 1 cut(s) 318
AfaI GTAC 2 cut(s) 529, 584
AfiI CCNNNNNNNGG 2 cut(s) 244, 1196
AflII CTTAAG 1 cut(s) 116
AgsI TTSAA 8 cut(s) 214, 232, 257, 287, 508, 841, 884, 1130
AjnI CCWGG 1 cut(s) 124
AluBI AGCT 8 cut(s) 113, 330, 632, 685, 956, 966, 1162, 1237
AluI AGCT 8 cut(s) 113, 330, 632, 685, 956, 966, 1162, 1237
Alw21I GWGCWC 1 cut(s) 115
Alw26I GTCTC 1 cut(s) 1130
AlwNI CAGNNNCTG 1 cut(s) 959
AoxI GGCC 2 cut(s) 912, 970
ApaI GGGCCC 1 cut(s) 916
ApeKI GCWGC 3 cut(s) 953, 1025, 1159
ApoI RAATTY 1 cut(s) 259
AseI ATTAAT 1 cut(s) 468
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 3 cut(s) 128, 912, 913
AsuHPI GGTGA 5 cut(s) 760, 880, 908, 1090, 1114
AvaII GGWCC 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 916
BanI GGYRCC 2 cut(s) 121, 1010
BanII GRGCYC 2 cut(s) 115, 916
Bbv12I GWGCWC 1 cut(s) 115
BbvI GCAGC 3 cut(s) 965, 1012, 1171
BccI CCATC 8 cut(s) 435, 518, 569, 821, 859, 1000, 1022, 1093
BciT130I CCWGG 1 cut(s) 126
BciVI GTATCC 1 cut(s) 801
BclI TGATCA 1 cut(s) 1080
BcoDI GTCTC 1 cut(s) 1130
BfaI CTAG 4 cut(s) 23, 612, 1049, 1229
BfrI CTTAAG 1 cut(s) 116
BfuI GTATCC 1 cut(s) 801
BisI GCNGC 3 cut(s) 954, 1026, 1160
BlsI GCNGC 3 cut(s) 955, 1027, 1161
Bme1390I CCNGG 1 cut(s) 126
Bme18I GGWCC 1 cut(s) 128
BmgT120I GGNCC 3 cut(s) 128, 912, 913
BmiI GGNNCC 3 cut(s) 123, 914, 1012
BmrFI CCNGG 1 cut(s) 126
BmsI GCATC 2 cut(s) 311, 610
BpmI CTGGAG 2 cut(s) 372, 1115
Bpu10I CCTNAGC 1 cut(s) 967
BpuEI CTTGAG 2 cut(s) 413, 671
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 2 cut(s) 244, 1196
Bse1I ACTGG 2 cut(s) 608, 1026
Bse3DI GCAATG 1 cut(s) 485
BseBI CCWGG 1 cut(s) 126
BseGI GGATG 2 cut(s) 580, 832
BseLI CCNNNNNNNGG 2 cut(s) 244, 1196
BseMI GCAATG 1 cut(s) 485
BseNI ACTGG 2 cut(s) 608, 1026
BseRI GAGGAG 2 cut(s) 522, 1226
BseSI GKGCMC 1 cut(s) 916
BseXI GCAGC 3 cut(s) 965, 1012, 1171
BseYI CCCAGC 2 cut(s) 569, 1028
BsgI GTGCAG 2 cut(s) 972, 1178
BshFI GGCC 2 cut(s) 914, 972
BshNI GGYRCC 2 cut(s) 121, 1010
BsiHKAI GWGCWC 1 cut(s) 115
BslFI GGGAC 1 cut(s) 386
BslI CCNNNNNNNGG 2 cut(s) 244, 1196
BsmAI GTCTC 1 cut(s) 1130
BsmFI GGGAC 1 cut(s) 386
BsnI GGCC 2 cut(s) 914, 972
Bsp120I GGGCCC 1 cut(s) 912
Bsp1286I GDGCHC 2 cut(s) 115, 916
Bsp143I GATC 2 cut(s) 493, 1080
BspACI CCGC 1 cut(s) 910
BspANI GGCC 2 cut(s) 914, 972
BspLI GGNNCC 3 cut(s) 123, 914, 1012
BspT107I GGYRCC 2 cut(s) 121, 1010
BspTI CTTAAG 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 485
BsrI ACTGG 2 cut(s) 608, 1026
BssMI GATC 2 cut(s) 493, 1080
Bst2UI CCWGG 1 cut(s) 126
Bst4CI ACNGT 4 cut(s) 187, 589, 716, 763
Bst6I CTCTTC 2 cut(s) 587, 1230
BstAFI CTTAAG 1 cut(s) 116
BstAPI GCANNNNNTGC 1 cut(s) 308
BstC8I GCNNGC 2 cut(s) 709, 912
BstDEI CTNAG 1 cut(s) 967
BstF5I GGATG 2 cut(s) 580, 832
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 2 cut(s) 496, 1083
BstMAI GTCTC 1 cut(s) 1130
BstMBI GATC 2 cut(s) 493, 1080
BstMWI GCNNNNNNNGC 4 cut(s) 119, 308, 629, 1168
BstNI CCWGG 1 cut(s) 126
BstNSI RCATGY 4 cut(s) 146, 210, 653, 711
BstSCI CCNGG 1 cut(s) 124
BstSLI GKGCMC 1 cut(s) 916
BstV1I GCAGC 3 cut(s) 965, 1012, 1171
BstXI CCANNNNNNTGG 1 cut(s) 1021
BsuI GTATCC 1 cut(s) 801
BsuRI GGCC 2 cut(s) 914, 972
BtsCI GGATG 2 cut(s) 580, 832
BtsIMutI CAGTG 2 cut(s) 585, 601
Cac8I GCNNGC 2 cut(s) 709, 912
CaiI CAGNNNCTG 1 cut(s) 959
CfoI GCGC 1 cut(s) 655
Cfr13I GGNCC 3 cut(s) 128, 912, 913
Csp6I GTAC 2 cut(s) 528, 583
CviAII CATG 7 cut(s) 143, 207, 406, 650, 708, 791, 812
CviQI GTAC 2 cut(s) 528, 583
DdeI CTNAG 1 cut(s) 967
DpnI GATC 2 cut(s) 495, 1082
DpnII GATC 2 cut(s) 493, 1080
DraI TTTAAA 1 cut(s) 1149
Eam1104I CTCTTC 2 cut(s) 587, 1230
EarI CTCTTC 2 cut(s) 587, 1230
Ecl136II GAGCTC 1 cut(s) 113
Eco24I GRGCYC 2 cut(s) 115, 916
Eco47I GGWCC 1 cut(s) 128
Eco53kI GAGCTC 1 cut(s) 113
Eco57I CTGAAG 1 cut(s) 318
EcoICRI GAGCTC 1 cut(s) 113
EcoO109I RGGNCCY 1 cut(s) 913
EcoRII CCWGG 1 cut(s) 124
EcoT22I ATGCAT 1 cut(s) 792
EcoT38I GRGCYC 2 cut(s) 115, 916
FaeI CATG 7 cut(s) 146, 210, 409, 653, 711, 794, 815
FaqI GGGAC 1 cut(s) 386
FatI CATG 7 cut(s) 142, 206, 405, 649, 707, 790, 811
FauI CCCGC 1 cut(s) 903
FbaI TGATCA 1 cut(s) 1080
Fnu4HI GCNGC 3 cut(s) 954, 1026, 1160
FokI GGATG 2 cut(s) 587, 839
FriOI GRGCYC 2 cut(s) 115, 916
Fsp4HI GCNGC 3 cut(s) 954, 1026, 1160
FspBI CTAG 4 cut(s) 23, 612, 1049, 1229
GlaI GCGC 1 cut(s) 654
GluI GCNGC 3 cut(s) 954, 1026, 1160
GsaI CCCAGC 2 cut(s) 573, 1032
GsuI CTGGAG 2 cut(s) 372, 1115
HaeIII GGCC 2 cut(s) 914, 972
HhaI GCGC 1 cut(s) 655
Hin1II CATG 7 cut(s) 146, 210, 409, 653, 711, 794, 815
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HinfI GANTC 4 cut(s) 287, 340, 1216, 1222
HphI GGTGA 5 cut(s) 760, 880, 908, 1090, 1114
Hpy166II GTNNAC 3 cut(s) 12, 585, 783
Hpy188I TCNGA 4 cut(s) 961, 1069, 1191, 1221
Hpy188III TCNNGA 5 cut(s) 23, 371, 667, 688, 1242
Hpy8I GTNNAC 3 cut(s) 12, 585, 783
Hpy99I CGWCG 1 cut(s) 716
HpyAV CCTTC 9 cut(s) 409, 573, 791, 827, 878, 893, 941, 1099, 1168
HpyCH4III ACNGT 4 cut(s) 187, 589, 716, 763
HpyCH4IV ACGT 1 cut(s) 861
HpyCH4V TGCA 6 cut(s) 64, 146, 769, 790, 953, 1159
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 308, 629, 1168
HpyF3I CTNAG 1 cut(s) 967
HpySE526I ACGT 1 cut(s) 861
Hsp92II CATG 7 cut(s) 146, 210, 409, 653, 711, 794, 815
HspAI GCGC 1 cut(s) 653
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 2 cut(s) 493, 1080
LmnI GCTCC 2 cut(s) 110, 327
Lsp1109I GCAGC 3 cut(s) 965, 1012, 1171
LweI GCATC 2 cut(s) 311, 610
MaeI CTAG 4 cut(s) 23, 612, 1049, 1229
MaeII ACGT 1 cut(s) 861
MaeIII GTNAC 4 cut(s) 318, 479, 511, 599
MalI GATC 2 cut(s) 495, 1082
MboI GATC 2 cut(s) 493, 1080
MboII GAAGA 2 cut(s) 604, 1217
MhlI GDGCHC 2 cut(s) 115, 916
MluCI AATT 8 cut(s) 160, 227, 259, 419, 734, 940, 1038, 1070
MlyI GAGTC 2 cut(s) 349, 1216
MmeI TCCRAC 1 cut(s) 1214
Mph1103I ATGCAT 1 cut(s) 792
MseI TTAA 9 cut(s) 117, 201, 219, 387, 468, 557, 645, 1148, 1167
MspCI CTTAAG 1 cut(s) 116
MspR9I CCNGG 1 cut(s) 126
MssI GTTTAAAC 1 cut(s) 1149
MvaI CCWGG 1 cut(s) 126
MwoI GCNNNNNNNGC 4 cut(s) 119, 308, 629, 1168
NdeII GATC 2 cut(s) 493, 1080
NlaIII CATG 7 cut(s) 146, 210, 409, 653, 711, 794, 815
NlaIV GGNNCC 3 cut(s) 123, 914, 1012
NmuCI GTSAC 4 cut(s) 318, 479, 511, 599
NsiI ATGCAT 1 cut(s) 792
NspI RCATGY 4 cut(s) 146, 210, 653, 711
PaeI GCATGC 1 cut(s) 711
PfeI GAWTC 2 cut(s) 287, 1216
PkrI GCNGC 3 cut(s) 955, 1027, 1161
PleI GAGTC 2 cut(s) 348, 1216
PmeI GTTTAAAC 1 cut(s) 1149
PpsI GAGTC 2 cut(s) 348, 1216
PshBI ATTAAT 1 cut(s) 468
Psp124BI GAGCTC 1 cut(s) 115
Psp6I CCWGG 1 cut(s) 124
PspFI CCCAGC 2 cut(s) 569, 1028
PspGI CCWGG 1 cut(s) 124
PspN4I GGNNCC 3 cut(s) 123, 914, 1012
PspOMI GGGCCC 1 cut(s) 912
PspPI GGNCC 3 cut(s) 128, 912, 913
PstNI CAGNNNCTG 1 cut(s) 959
RsaI GTAC 2 cut(s) 529, 584
RsaNI GTAC 2 cut(s) 528, 583
SacI GAGCTC 1 cut(s) 115
SaqAI TTAA 9 cut(s) 117, 201, 219, 387, 468, 557, 645, 1148, 1167
SatI GCNGC 3 cut(s) 954, 1026, 1160
Sau3AI GATC 2 cut(s) 493, 1080
Sau96I GGNCC 3 cut(s) 128, 912, 913
SchI GAGTC 2 cut(s) 349, 1216
ScrFI CCNGG 1 cut(s) 126
SduI GDGCHC 2 cut(s) 115, 916
SfaNI GCATC 2 cut(s) 311, 610
SinI GGWCC 1 cut(s) 128
SmlI CTYRAG 3 cut(s) 116, 428, 686
SmoI CTYRAG 3 cut(s) 116, 428, 686
SphI GCATGC 1 cut(s) 711
Sse9I AATT 8 cut(s) 160, 227, 259, 419, 734, 940, 1038, 1070
SsiI CCGC 1 cut(s) 910
SspMI CTAG 4 cut(s) 23, 612, 1049, 1229
SstI GAGCTC 1 cut(s) 115
StyD4I CCNGG 1 cut(s) 124
TaaI ACNGT 4 cut(s) 187, 589, 716, 763
TaiI ACGT 1 cut(s) 864
TasI AATT 8 cut(s) 160, 227, 259, 419, 734, 940, 1038, 1070
TfiI GAWTC 2 cut(s) 287, 1216
Tru1I TTAA 9 cut(s) 117, 201, 219, 387, 468, 557, 645, 1148, 1167
Tru9I TTAA 9 cut(s) 117, 201, 219, 387, 468, 557, 645, 1148, 1167
TscAI CASTG 2 cut(s) 592, 608
TseFI GTSAC 4 cut(s) 318, 479, 511, 599
TseI GCWGC 3 cut(s) 953, 1025, 1159
Tsp45I GTSAC 4 cut(s) 318, 479, 511, 599
TspDTI ATGAA 2 cut(s) 394, 1034
TspRI CASTG 2 cut(s) 592, 608
Vha464I CTTAAG 1 cut(s) 116
VpaK11BI GGWCC 1 cut(s) 128
VspI ATTAAT 1 cut(s) 468
XapI RAATTY 1 cut(s) 259
XbaI TCTAGA 1 cut(s) 22
XceI RCATGY 4 cut(s) 146, 210, 653, 711
XcmI CCANNNNNNNNNTGG 1 cut(s) 663
XspI CTAG 4 cut(s) 23, 612, 1049, 1229
Zsp2I ATGCAT 1 cut(s) 792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.