Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 26 |
| AciI | CCGC | 1 cut(s) | 285 |
| AclWI | GGATC | 1 cut(s) | 37 |
| AcsI | RAATTY | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 169 |
| AflII | CTTAAG | 1 cut(s) | 65 |
| AgsI | TTSAA | 2 cut(s) | 214, 242 |
| AjnI | CCWGG | 1 cut(s) | 297 |
| AluBI | AGCT | 3 cut(s) | 8, 55, 188 |
| AluI | AGCT | 3 cut(s) | 8, 55, 188 |
| AlwI | GGATC | 1 cut(s) | 37 |
| AoxI | GGCC | 1 cut(s) | 60 |
| ApoI | RAATTY | 1 cut(s) | 226 |
| AspA2I | CCTAGG | 1 cut(s) | 167 |
| AspS9I | GGNCC | 1 cut(s) | 61 |
| AvrII | CCTAGG | 1 cut(s) | 167 |
| BciT130I | CCWGG | 1 cut(s) | 299 |
| BfaI | CTAG | 1 cut(s) | 168 |
| BfrI | CTTAAG | 1 cut(s) | 65 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 68 |
| BlnI | CCTAGG | 1 cut(s) | 167 |
| Bme1390I | CCNGG | 1 cut(s) | 299 |
| BmgT120I | GGNCC | 1 cut(s) | 61 |
| BmrFI | CCNGG | 1 cut(s) | 299 |
| BmsI | GCATC | 1 cut(s) | 153 |
| Bsa29I | ATCGAT | 3 cut(s) | 269, 279, 312 |
| BsaBI | GATNNNNATC | 2 cut(s) | 98, 275 |
| BsaJI | CCNNGG | 2 cut(s) | 42, 167 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 169 |
| Bse8I | GATNNNNATC | 2 cut(s) | 98, 275 |
| BseBI | CCWGG | 1 cut(s) | 299 |
| BseCI | ATCGAT | 3 cut(s) | 269, 279, 312 |
| BseDI | CCNNGG | 2 cut(s) | 42, 167 |
| BseJI | GATNNNNATC | 2 cut(s) | 98, 275 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 169 |
| BseMII | CTCAG | 2 cut(s) | 42, 123 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BshVI | ATCGAT | 3 cut(s) | 269, 279, 312 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 169 |
| BsnI | GGCC | 1 cut(s) | 62 |
| Bsp143I | GATC | 2 cut(s) | 29, 276 |
| BspACI | CCGC | 1 cut(s) | 285 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspCNI | CTCAG | 2 cut(s) | 43, 124 |
| BspDI | ATCGAT | 3 cut(s) | 269, 279, 312 |
| BspPI | GGATC | 1 cut(s) | 37 |
| BspTI | CTTAAG | 1 cut(s) | 65 |
| BssECI | CCNNGG | 2 cut(s) | 42, 167 |
| BssMI | GATC | 2 cut(s) | 29, 276 |
| BssT1I | CCWWGG | 2 cut(s) | 42, 167 |
| Bst2UI | CCWGG | 1 cut(s) | 299 |
| BstAFI | CTTAAG | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 2 cut(s) | 73, 142 |
| BstDEI | CTNAG | 2 cut(s) | 51, 132 |
| BstKTI | GATC | 2 cut(s) | 32, 279 |
| BstMBI | GATC | 2 cut(s) | 29, 276 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 68 |
| BstNI | CCWGG | 1 cut(s) | 299 |
| BstSCI | CCNGG | 1 cut(s) | 297 |
| BstX2I | RGATCY | 1 cut(s) | 29 |
| BstYI | RGATCY | 1 cut(s) | 29 |
| Bsu15I | ATCGAT | 3 cut(s) | 269, 279, 312 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| BsuTUI | ATCGAT | 3 cut(s) | 269, 279, 312 |
| BtsIMutI | CAGTG | 1 cut(s) | 129 |
| Cac8I | GCNNGC | 2 cut(s) | 73, 142 |
| Cfr13I | GGNCC | 1 cut(s) | 61 |
| ClaI | ATCGAT | 3 cut(s) | 269, 279, 312 |
| CviJI | RGCY | 8 cut(s) | 8, 55, 62, 71, 75, 188, 259, 302 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 55, 62, 71, 75, 188, 259, 302 |
| DdeI | CTNAG | 2 cut(s) | 51, 132 |
| DpnI | GATC | 2 cut(s) | 31, 278 |
| DpnII | GATC | 2 cut(s) | 29, 276 |
| Eco130I | CCWWGG | 2 cut(s) | 42, 167 |
| EcoRII | CCWGG | 1 cut(s) | 297 |
| EcoT14I | CCWWGG | 2 cut(s) | 42, 167 |
| ErhI | CCWWGG | 2 cut(s) | 42, 167 |
| FaiI | YATR | 4 cut(s) | 192, 246, 263, 306 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 59, 91, 194, 226 |
| FspBI | CTAG | 1 cut(s) | 168 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| HinfI | GANTC | 4 cut(s) | 99, 266, 281, 309 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 2 cut(s) | 211, 239 |
| HpyAV | CCTTC | 1 cut(s) | 113 |
| HpyCH4V | TGCA | 1 cut(s) | 177 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 132 |
| Kzo9I | GATC | 2 cut(s) | 29, 276 |
| LmnI | GCTCC | 1 cut(s) | 5 |
| LpnPI | CCDG | 4 cut(s) | 57, 154, 284, 311 |
| LweI | GCATC | 1 cut(s) | 153 |
| MaeI | CTAG | 1 cut(s) | 168 |
| MaeIII | GTNAC | 2 cut(s) | 46, 293 |
| MalI | GATC | 2 cut(s) | 31, 278 |
| MboI | GATC | 2 cut(s) | 29, 276 |
| MflI | RGATCY | 1 cut(s) | 29 |
| MluCI | AATT | 2 cut(s) | 21, 226 |
| MmeI | TCCRAC | 2 cut(s) | 187, 231 |
| MnlI | CCTC | 2 cut(s) | 127, 145 |
| MseI | TTAA | 3 cut(s) | 66, 273, 316 |
| MspA1I | CMGCKG | 1 cut(s) | 287 |
| MspCI | CTTAAG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 1 cut(s) | 299 |
| MvaI | CCWGG | 1 cut(s) | 299 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 68 |
| NdeII | GATC | 2 cut(s) | 29, 276 |
| PfeI | GAWTC | 4 cut(s) | 99, 266, 281, 309 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 26 |
| Psp6I | CCWGG | 1 cut(s) | 297 |
| PspGI | CCWGG | 1 cut(s) | 297 |
| PspPI | GGNCC | 1 cut(s) | 61 |
| PsuI | RGATCY | 1 cut(s) | 29 |
| SaqAI | TTAA | 3 cut(s) | 66, 273, 316 |
| Sau3AI | GATC | 2 cut(s) | 29, 276 |
| Sau96I | GGNCC | 1 cut(s) | 61 |
| ScrFI | CCNGG | 1 cut(s) | 299 |
| SetI | ASST | 7 cut(s) | 10, 57, 138, 156, 169, 190, 300 |
| SfaNI | GCATC | 1 cut(s) | 153 |
| SmlI | CTYRAG | 1 cut(s) | 65 |
| SmoI | CTYRAG | 1 cut(s) | 65 |
| Sse9I | AATT | 2 cut(s) | 21, 226 |
| SsiI | CCGC | 1 cut(s) | 285 |
| SspMI | CTAG | 1 cut(s) | 168 |
| StyD4I | CCNGG | 1 cut(s) | 297 |
| StyI | CCWWGG | 2 cut(s) | 42, 167 |
| TaqI | TCGA | 3 cut(s) | 269, 279, 312 |
| TasI | AATT | 2 cut(s) | 21, 226 |
| TfiI | GAWTC | 4 cut(s) | 99, 266, 281, 309 |
| Tru1I | TTAA | 3 cut(s) | 66, 273, 316 |
| Tru9I | TTAA | 3 cut(s) | 66, 273, 316 |
| TscAI | CASTG | 1 cut(s) | 136 |
| TspDTI | ATGAA | 2 cut(s) | 196, 237 |
| TspRI | CASTG | 1 cut(s) | 136 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 26 |
| Vha464I | CTTAAG | 1 cut(s) | 65 |
| XapI | RAATTY | 1 cut(s) | 226 |
| XmaJI | CCTAGG | 1 cut(s) | 167 |
| XspI | CTAG | 1 cut(s) | 168 |