Rorug01G0403900

Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
51133973 .. 51137103
3131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0403900.1

Sequence Viewer

Length: 1098 bp
ATGGACTGCGCTTGCAGTAATTTCAGAAGCTCTTCTCTGCTTCATCAATGGCGATCTCCCTCTCCGCTTCCTCACCGTCTCTTATCGTCAAAGCTCGCCTTATTGAGGGTAAAGCGTTTGAACCTGGCTAAGCATGGCCGGCTGGTCACCAGAGCTTGTGGGTCTGACGAAAATAGCTCTGTTAATGGGTTTAACATCACACCCAACAAGCTTTTCATGCAAGAGGCCATTGGAGCTGAATATGGAGAAGGGTTTGAGACTTTTAGACCGGATGGACCTCTTAAGATTGATGTGGATTTTTTGAACGATAGACTGCAAGAAGGTTTTCTTAAACGGATAAGATATGCCATGAAGCCGGATGAAGCTTATGGGCTTATTTTCTCTTTCGACAATGTTGTGGCTGATACTCGAGCTTTGAAATTAAATGCTTGGAAGCAGCTTGCTGCAGAAGAGGGAAAGGAAATTCCAAAAGAGGCTGATGTGCAAGGACAGATGCTTTATGCAGGTGCTGATCATGTATTACATAAGCTTTTACTCTGGGATAAAGCAGAGACAGAACTGACTAGGTTGGCGTTAAGGTTTTCGCAACTATTTTATGATAATCTTCTCAGGCTTAGTAAACCCATGGAGGGGCTCAAAGAATGGCTGGAGGCTGTATCTACAGCACGCATCCCTTGTGCTGTTGTTTCAAGTCTTGATCGCAGAAGCATTGTCAAAGCCCTAGAACGAATGGGACTCGAGAAGTATTTTCAGGCAATTGTGACCGAGGAAGATGGCATGGATTCTATAGCTCATAGGTTTCTGTCTGCAGCTGTGAAGCTGGATCGGAAGCCATCCAAGTGTGTAGTGTTTGAGGATGAGCCTAGAGGTATAACTGCCGCTCACAACTGTACGATGATGGCTGTAGGATTGATCGGCGCCCACCCTGCGTATGATCTGGTGCAGGCTGATCTTGCAGTTGCTAGTTTCAATGAACTTTCCGTAATCAATCTCCGAAGACTATTTGCAAACAAGGGTTCTACATTCATGGACCTCCAAAAACAGATCATAGAGAAATCTCCACCGAAGAGGAAGCTTACAATCGATACTATTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

365

Amino Acids

41.07

Weight (kDa)

8.62

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAD_2 PF13419 126 - 301 3.5e-18 Haloacid dehalogenase-like hydrolase
Hydrolase PF00702 129 - 296 1.4e-10 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 494
Acc36I ACCTGC 1 cut(s) 494
AccB1I GGYRCC 1 cut(s) 917
AccBSI CCGCTC 1 cut(s) 881
AciI CCGC 2 cut(s) 65, 879
AclWI GGATC 1 cut(s) 831
AcoI YGGCCR 1 cut(s) 136
AcsI RAATTY 1 cut(s) 462
AcyI GRCGYC 1 cut(s) 918
AfaI GTAC 1 cut(s) 892
AfiI CCNNNNNNNGG 3 cut(s) 105, 629, 630
AflII CTTAAG 1 cut(s) 281
AgsI TTSAA 5 cut(s) 121, 304, 418, 690, 970
AjnI CCWGG 1 cut(s) 123
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
Alw26I GTCTC 3 cut(s) 83, 251, 545
AlwI GGATC 1 cut(s) 831
AlwNI CAGNNNCTG 1 cut(s) 509
Ama87I CYCGRG 2 cut(s) 408, 737
AoxI GGCC 2 cut(s) 136, 225
ApeKI GCWGC 3 cut(s) 436, 443, 809
ApoI RAATTY 1 cut(s) 462
Asp700I GAANNNNTTC 2 cut(s) 31, 324
AspLEI GCGC 2 cut(s) 11, 920
AspS9I GGNCC 2 cut(s) 275, 1030
AsuHPI GGTGA 2 cut(s) 65, 139
AvaI CYCGRG 2 cut(s) 408, 737
AvaII GGWCC 2 cut(s) 275, 1030
BanI GGYRCC 1 cut(s) 917
BanII GRGCYC 1 cut(s) 636
BbsI GAAGAC 1 cut(s) 1003
BbvI GCAGC 3 cut(s) 430, 448, 821
BccI CCATC 4 cut(s) 266, 767, 841, 892
BciT130I CCWGG 1 cut(s) 125
BclI TGATCA 1 cut(s) 511
BcoDI GTCTC 3 cut(s) 83, 251, 545
BfaI CTAG 4 cut(s) 564, 722, 864, 963
BfmI CTRYAG 5 cut(s) 444, 660, 786, 807, 903
BfoI RGCGCY 1 cut(s) 921
BfrI CTTAAG 1 cut(s) 281
BfuAI ACCTGC 1 cut(s) 494
BisI GCNGC 4 cut(s) 437, 444, 810, 879
BlpI GCTNAGC 1 cut(s) 129
BlsI GCNGC 4 cut(s) 438, 445, 811, 880
Bme1390I CCNGG 1 cut(s) 125
Bme18I GGWCC 2 cut(s) 275, 1030
BmeT110I CYCGRG 2 cut(s) 408, 737
BmgT120I GGNCC 2 cut(s) 275, 1030
BmiI GGNNCC 1 cut(s) 919
BmrFI CCNGG 1 cut(s) 125
BmsI GCATC 2 cut(s) 483, 678
BpiI GAAGAC 1 cut(s) 1003
BpmI CTGGAG 1 cut(s) 668
Bpu1102I GCTNAGC 1 cut(s) 129
Bsa29I ATCGAT 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 918
BsaJI CCNNGG 2 cut(s) 624, 765
BsaWI WCCGGW 1 cut(s) 268
Bsc4I CCNNNNNNNGG 3 cut(s) 105, 629, 630
Bse118I RCCGGY 1 cut(s) 138
BseBI CCWGG 1 cut(s) 125
BseCI ATCGAT 1 cut(s) 1083
BseDI CCNNGG 2 cut(s) 624, 765
BseGI GGATG 5 cut(s) 277, 364, 669, 833, 862
BseLI CCNNNNNNNGG 3 cut(s) 105, 629, 630
BseMII CTCAG 1 cut(s) 622
BseXI GCAGC 3 cut(s) 430, 448, 821
BsgI GTGCAG 1 cut(s) 962
BshFI GGCC 2 cut(s) 138, 227
BshNI GGYRCC 1 cut(s) 917
BshVI ATCGAT 1 cut(s) 1083
BsiHKCI CYCGRG 2 cut(s) 408, 737
BsiSI CCGG 3 cut(s) 139, 269, 356
BslFI GGGAC 1 cut(s) 747
BslI CCNNNNNNNGG 3 cut(s) 105, 629, 630
BsmAI GTCTC 3 cut(s) 83, 251, 545
BsmBI CGTCTC 1 cut(s) 83
BsmFI GGGAC 1 cut(s) 747
BsnI GGCC 2 cut(s) 138, 227
BsoBI CYCGRG 2 cut(s) 408, 737
Bsp1286I GDGCHC 1 cut(s) 636
Bsp143I GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
Bsp1720I GCTNAGC 1 cut(s) 129
Bsp19I CCATGG 1 cut(s) 624
BspACI CCGC 2 cut(s) 65, 879
BspANI GGCC 2 cut(s) 138, 227
BspCNI CTCAG 1 cut(s) 621
BspDI ATCGAT 1 cut(s) 1083
BspLI GGNNCC 1 cut(s) 919
BspMAI CTGCAG 2 cut(s) 448, 811
BspMI ACCTGC 1 cut(s) 494
BspPI GGATC 1 cut(s) 831
BspQI GCTCTTC 1 cut(s) 37
BspT107I GGYRCC 1 cut(s) 917
BspTI CTTAAG 1 cut(s) 281
BsrBI CCGCTC 1 cut(s) 881
BsrFI RCCGGY 1 cut(s) 138
BssAI RCCGGY 1 cut(s) 138
BssECI CCNNGG 2 cut(s) 624, 765
BssMI GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
BssNI GRCGYC 1 cut(s) 918
BssT1I CCWWGG 1 cut(s) 624
Bst2UI CCWGG 1 cut(s) 125
Bst4CI ACNGT 2 cut(s) 77, 890
Bst6I CTCTTC 3 cut(s) 37, 444, 1061
BstACI GRCGYC 1 cut(s) 918
BstAFI CTTAAG 1 cut(s) 281
BstC8I GCNNGC 6 cut(s) 13, 96, 140, 441, 667, 945
BstDEI CTNAG 3 cut(s) 129, 608, 614
BstDSI CCRYGG 1 cut(s) 624
BstEII GGTNACC 1 cut(s) 145
BstENI CCTNNNNNAGG 1 cut(s) 103
BstF5I GGATG 5 cut(s) 277, 364, 669, 833, 862
BstH2I RGCGCY 1 cut(s) 921
BstHHI GCGC 2 cut(s) 11, 920
BstKTI GATC 8 cut(s) 56, 514, 700, 826, 915, 937, 952, 1047
BstMAI GTCTC 3 cut(s) 83, 251, 545
BstMBI GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
BstMWI GCNNNNNNNGC 5 cut(s) 139, 217, 233, 926, 953
BstNI CCWGG 1 cut(s) 125
BstPI GGTNACC 1 cut(s) 145
BstSCI CCNGG 1 cut(s) 123
BstSFI CTRYAG 5 cut(s) 444, 660, 786, 807, 903
BstV1I GCAGC 3 cut(s) 430, 448, 821
BstV2I GAAGAC 1 cut(s) 1003
Bsu15I ATCGAT 1 cut(s) 1083
BsuRI GGCC 2 cut(s) 138, 227
BsuTUI ATCGAT 1 cut(s) 1083
BtgI CCRYGG 1 cut(s) 624
BtsCI GGATG 5 cut(s) 277, 364, 669, 833, 862
BveI ACCTGC 1 cut(s) 494
Cac8I GCNNGC 6 cut(s) 13, 96, 140, 441, 667, 945
CaiI CAGNNNCTG 1 cut(s) 509
CfoI GCGC 2 cut(s) 11, 920
Cfr10I RCCGGY 1 cut(s) 138
Cfr13I GGNCC 2 cut(s) 275, 1030
ClaI ATCGAT 1 cut(s) 1083
Csp6I GTAC 1 cut(s) 891
CviAII CATG 7 cut(s) 134, 217, 349, 515, 625, 778, 1027
CviQI GTAC 1 cut(s) 891
DdeI CTNAG 3 cut(s) 129, 608, 614
DinI GGCGCC 1 cut(s) 919
DpnI GATC 8 cut(s) 55, 513, 699, 825, 914, 936, 951, 1046
DpnII GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
EaeI YGGCCR 1 cut(s) 136
Eam1104I CTCTTC 3 cut(s) 37, 444, 1061
EarI CTCTTC 3 cut(s) 37, 444, 1061
Eco130I CCWWGG 1 cut(s) 624
Eco24I GRGCYC 1 cut(s) 636
Eco47I GGWCC 2 cut(s) 275, 1030
Eco88I CYCGRG 2 cut(s) 408, 737
Eco91I GGTNACC 1 cut(s) 145
EcoNI CCTNNNNNAGG 1 cut(s) 103
EcoO65I GGTNACC 1 cut(s) 145
EcoRII CCWGG 1 cut(s) 123
EcoT14I CCWWGG 1 cut(s) 624
EcoT38I GRGCYC 1 cut(s) 636
EgeI GGCGCC 1 cut(s) 919
EheI GGCGCC 1 cut(s) 919
ErhI CCWWGG 1 cut(s) 624
Esp3I CGTCTC 1 cut(s) 83
FaeI CATG 7 cut(s) 137, 220, 352, 518, 628, 781, 1030
FalI AAGNNNNNCTT 4 cut(s) 83, 115, 312, 344
FaqI GGGAC 1 cut(s) 747
FatI CATG 7 cut(s) 133, 216, 348, 514, 624, 777, 1026
FbaI TGATCA 1 cut(s) 511
Fnu4HI GCNGC 4 cut(s) 437, 444, 810, 879
FokI GGATG 5 cut(s) 284, 371, 656, 820, 869
FriOI GRGCYC 1 cut(s) 636
Fsp4HI GCNGC 4 cut(s) 437, 444, 810, 879
FspBI CTAG 4 cut(s) 564, 722, 864, 963
GlaI GCGC 2 cut(s) 10, 919
GluI GCNGC 4 cut(s) 437, 444, 810, 879
GsuI CTGGAG 1 cut(s) 668
HaeII RGCGCY 1 cut(s) 921
HaeIII GGCC 2 cut(s) 138, 227
HapII CCGG 3 cut(s) 139, 269, 356
HhaI GCGC 2 cut(s) 11, 920
Hin1I GRCGYC 1 cut(s) 918
Hin1II CATG 7 cut(s) 137, 220, 352, 518, 628, 781, 1030
Hin6I GCGC 2 cut(s) 9, 918
HinP1I GCGC 2 cut(s) 9, 918
HindIII AAGCTT 4 cut(s) 209, 363, 527, 1073
HinfI GANTC 2 cut(s) 735, 782
HpaII CCGG 3 cut(s) 139, 269, 356
HphI GGTGA 2 cut(s) 65, 139
Hpy166II GTNNAC 1 cut(s) 620
Hpy188I TCNGA 5 cut(s) 26, 166, 828, 995, 1097
Hpy188III TCNNGA 2 cut(s) 695, 739
Hpy8I GTNNAC 1 cut(s) 620
HpyAV CCTTC 2 cut(s) 242, 314
HpyCH4III ACNGT 2 cut(s) 77, 890
HpyF10VI GCNNNNNNNGC 5 cut(s) 139, 217, 233, 926, 953
HpyF3I CTNAG 3 cut(s) 129, 608, 614
Hsp92I GRCGYC 1 cut(s) 918
Hsp92II CATG 7 cut(s) 137, 220, 352, 518, 628, 781, 1030
HspAI GCGC 2 cut(s) 9, 918
KasI GGCGCC 1 cut(s) 917
KroI GCCGGC 1 cut(s) 138
KroNI GCCGGC 1 cut(s) 140
Ksp22I TGATCA 1 cut(s) 511
Kzo9I GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
LguI GCTCTTC 1 cut(s) 37
LmnI GCTCC 1 cut(s) 233
Lsp1109I GCAGC 3 cut(s) 430, 448, 821
LweI GCATC 2 cut(s) 483, 678
MaeI CTAG 4 cut(s) 564, 722, 864, 963
MaeIII GTNAC 2 cut(s) 145, 760
MalI GATC 8 cut(s) 55, 513, 699, 825, 914, 936, 951, 1046
MbiI CCGCTC 1 cut(s) 881
MboI GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
MboII GAAGA 6 cut(s) 24, 461, 596, 782, 1008, 1078
MfeI CAATTG 1 cut(s) 756
MhlI GDGCHC 1 cut(s) 636
MluCI AATT 4 cut(s) 19, 419, 462, 756
Mly113I GGCGCC 1 cut(s) 918
MlyI GAGTC 1 cut(s) 729
MroNI GCCGGC 1 cut(s) 138
MroXI GAANNNNTTC 2 cut(s) 31, 324
MseI TTAA 6 cut(s) 183, 192, 282, 330, 422, 575
MslI CAYNNNNRTG 1 cut(s) 838
MspA1I CMGCKG 1 cut(s) 812
MspCI CTTAAG 1 cut(s) 281
MspI CCGG 3 cut(s) 139, 269, 356
MspR9I CCNGG 1 cut(s) 125
MunI CAATTG 1 cut(s) 756
MvaI CCWGG 1 cut(s) 125
MwoI GCNNNNNNNGC 5 cut(s) 139, 217, 233, 926, 953
NaeI GCCGGC 1 cut(s) 140
NarI GGCGCC 1 cut(s) 918
NcoI CCATGG 1 cut(s) 624
NdeII GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
NgoMIV GCCGGC 1 cut(s) 138
NlaIII CATG 7 cut(s) 137, 220, 352, 518, 628, 781, 1030
NlaIV GGNNCC 1 cut(s) 919
NmuCI GTSAC 2 cut(s) 145, 760
PaeR7I CTCGAG 2 cut(s) 408, 737
PaqCI CACCTGC 1 cut(s) 494
PciSI GCTCTTC 1 cut(s) 37
PdiI GCCGGC 1 cut(s) 140
PdmI GAANNNNTTC 2 cut(s) 31, 324
PfeI GAWTC 1 cut(s) 782
PkrI GCNGC 4 cut(s) 438, 445, 811, 880
PleI GAGTC 1 cut(s) 729
PluTI GGCGCC 1 cut(s) 921
PpsI GAGTC 1 cut(s) 729
Psp6I CCWGG 1 cut(s) 123
PspEI GGTNACC 1 cut(s) 145
PspGI CCWGG 1 cut(s) 123
PspN4I GGNNCC 1 cut(s) 919
PspPI GGNCC 2 cut(s) 275, 1030
PspXI VCTCGAGB 1 cut(s) 408
PstI CTGCAG 2 cut(s) 448, 811
PstNI CAGNNNCTG 1 cut(s) 509
PvuII CAGCTG 1 cut(s) 812
RsaI GTAC 1 cut(s) 892
RsaNI GTAC 1 cut(s) 891
RseI CAYNNNNRTG 1 cut(s) 838
SapI GCTCTTC 1 cut(s) 37
SaqAI TTAA 6 cut(s) 183, 192, 282, 330, 422, 575
SatI GCNGC 4 cut(s) 437, 444, 810, 879
Sau3AI GATC 8 cut(s) 53, 511, 697, 823, 912, 934, 949, 1044
Sau96I GGNCC 2 cut(s) 275, 1030
SchI GAGTC 1 cut(s) 729
ScrFI CCNGG 1 cut(s) 125
SduI GDGCHC 1 cut(s) 636
SfaNI GCATC 2 cut(s) 483, 678
SfcI CTRYAG 5 cut(s) 444, 660, 786, 807, 903
SfoI GGCGCC 1 cut(s) 919
Sfr274I CTCGAG 2 cut(s) 408, 737
SinI GGWCC 2 cut(s) 275, 1030
SlaI CTCGAG 2 cut(s) 408, 737
SmiMI CAYNNNNRTG 1 cut(s) 838
SmlI CTYRAG 3 cut(s) 281, 408, 737
SmoI CTYRAG 3 cut(s) 281, 408, 737
Sse9I AATT 4 cut(s) 19, 419, 462, 756
SsiI CCGC 2 cut(s) 65, 879
SspDI GGCGCC 1 cut(s) 917
SspMI CTAG 4 cut(s) 564, 722, 864, 963
StyD4I CCNGG 1 cut(s) 123
StyI CCWWGG 1 cut(s) 624
TaaI ACNGT 2 cut(s) 77, 890
TaqI TCGA 4 cut(s) 387, 409, 738, 1083
TaqII GACCGA 1 cut(s) 779
TasI AATT 4 cut(s) 19, 419, 462, 756
TauI GCSGC 1 cut(s) 881
TfiI GAWTC 1 cut(s) 782
Tru1I TTAA 6 cut(s) 183, 192, 282, 330, 422, 575
Tru9I TTAA 6 cut(s) 183, 192, 282, 330, 422, 575
TseFI GTSAC 2 cut(s) 145, 760
TseI GCWGC 3 cut(s) 436, 443, 809
Tsp45I GTSAC 2 cut(s) 145, 760
TspDTI ATGAA 6 cut(s) 32, 205, 365, 375, 987, 1015
TspGWI ACGGA 2 cut(s) 349, 970
Vha464I CTTAAG 1 cut(s) 281
VpaK11BI GGWCC 2 cut(s) 275, 1030
XagI CCTNNNNNAGG 1 cut(s) 103
XapI RAATTY 1 cut(s) 462
XhoI CTCGAG 2 cut(s) 408, 737
XmnI GAANNNNTTC 2 cut(s) 31, 324
XspI CTAG 4 cut(s) 564, 722, 864, 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.