RchiOBHm_Chr7g0187741

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000072
Physical Location & Seq
Forward (+)
7514104 .. 7515225
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16761

Sequence Viewer

Length: 1035 bp
ATGGTTCATTTTTTATGGCGGTGTTCAAATGGTTTTATGCCTTGTAAGGAGGAGCTGTTCCGGAGGAGAATTACATCGGAAGCTGGATGTTTTAGGTGTTGGCAAGCTACGGAGTCGCCTTTGCACGCATGTTGGGAGTGTGGGTTTGCAACTGCGGTGTTGGAGAGGGCGAATTTCTACTCCAGGTTAGCTTCGGTTCATTTTGTGAATTTCATCCAGTTTATTCAGGTAGCAATGGAAAGCCTATCGGTGAATGAATTGATGTTCTTAATTGTCATGTTATGGGTCAATTGGAAGGAGCGAAATGATGTTCTTCATGGTGGTGCTATTAGGCAGTCTGAGATCATTTTTAATGAGGCTTTCAATTTTTGGTCTGACTTAATTGCTTCCCAAACAAGGGCTGTCTGCAGAAGTGAAGGCAGTGTTCTTCTGAATCAAAGGATAGAAAGACATACTAGGTGGCAGGCTCCACCTGATCACAGTTTCAAATTGAATTGTGATGCTTCTGTGATTCAAAATGGGAAGGGTGTGGGGGTTGGCGCTGTGCTACGTGCTGGTGATGGGAAGATGATTTGGGCACTGGGTCTTAGAGTGCAAGACCATCTTTCTCCGCTGGCTGCTGAATTGATAGCTCTTAAAGTTGGTCTACAAGAAGCCATGCTTTGTAGGCCTTGTTCTTTGATGGTGGAGACCGACTGCTTGGAGGCTGTGAGGCTTGTGTTTGAGCCTGGAGAGTGTTTGGCTGAGGTAGGTGTTTTAGTGGAAGAAGTAAGGAGTCTTTTGCTCGTGAGTCCTGCTCCTAGGATAGAGTTTGTTCCTAGAGAAGCAAATCAAGTTGCTCATTCAATTGCTAAGTTTGTAGCCCGCGAGGTTGGGCGTTTTAAGTGGTTCGAAGTTGGGCCTCCTTGGCTCATGAAGGTTATTTCAAATGACCTACTTGTAACCTATAATGTTCCTGGGGTTGTGCGCGACTCATCAATCATTCGATCTGTGAATGAGGGTGGAGTTGCAGCTTGTCACACCCGTGCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

344

Amino Acids

38.64

Weight (kDa)

6.76

Isoelectric Point (pI)

46.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 165 - 286 1.6e-17 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 646
AccII CGCG 2 cut(s) 867, 969
AccIII TCCGGA 1 cut(s) 60
AciI CCGC 4 cut(s) 19, 155, 611, 865
AcsI RAATTY 2 cut(s) 172, 208
AfiI CCNNNNNNNGG 2 cut(s) 396, 397
AgsI TTSAA 7 cut(s) 27, 364, 487, 493, 515, 846, 927
AjnI CCWGG 3 cut(s) 182, 727, 955
AleI CACNNNNGTG 1 cut(s) 1023
AloI GAACNNNNNNTCC 2 cut(s) 41, 73
AluBI AGCT 6 cut(s) 55, 83, 107, 191, 632, 1013
AluI AGCT 6 cut(s) 55, 83, 107, 191, 632, 1013
Alw26I GTCTC 1 cut(s) 683
Aor13HI TCCGGA 1 cut(s) 60
AoxI GGCC 2 cut(s) 668, 899
ApeKI GCWGC 2 cut(s) 617, 1010
ApoI RAATTY 2 cut(s) 172, 208
AspA2I CCTAGG 1 cut(s) 800
AspLEI GCGC 2 cut(s) 542, 969
AspS9I GGNCC 1 cut(s) 899
AsuHPI GGTGA 2 cut(s) 262, 569
AsuII TTCGAA 1 cut(s) 891
AvrII CCTAGG 1 cut(s) 800
BaeGI GKGCMC 1 cut(s) 580
BauI CACGAG 1 cut(s) 785
BbvCI CCTCAGC 1 cut(s) 744
BbvI GCAGC 2 cut(s) 604, 1022
BccI CCATC 3 cut(s) 554, 609, 676
BciT130I CCWGG 3 cut(s) 184, 729, 957
BclI TGATCA 1 cut(s) 475
BcoDI GTCTC 1 cut(s) 683
BfaI CTAG 3 cut(s) 456, 801, 819
BfmI CTRYAG 1 cut(s) 406
BfoI RGCGCY 1 cut(s) 543
BglI GCCNNNNNGGC 1 cut(s) 907
BisI GCNGC 2 cut(s) 618, 1011
BlnI CCTAGG 1 cut(s) 800
BlsI GCNGC 2 cut(s) 619, 1012
Bme1390I CCNGG 3 cut(s) 184, 729, 957
BmgT120I GGNCC 1 cut(s) 899
BmiI GGNNCC 1 cut(s) 468
BmrFI CCNGG 3 cut(s) 184, 729, 957
BmrI ACTGGG 1 cut(s) 590
BmsI GCATC 1 cut(s) 490
BmuI ACTGGG 1 cut(s) 590
BplI GAGNNNNNCTC 2 cut(s) 781, 813
BpmI CTGGAG 2 cut(s) 166, 750
Bpu10I CCTNAGC 1 cut(s) 744
Bpu14I TTCGAA 1 cut(s) 891
BsaAI YACGTR 1 cut(s) 551
BsaI GGTCTC 1 cut(s) 683
BsaJI CCNNGG 3 cut(s) 800, 905, 956
BsaWI WCCGGW 1 cut(s) 60
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 128, 158
Bsc4I CCNNNNNNNGG 2 cut(s) 396, 397
Bse1I ACTGG 2 cut(s) 217, 585
Bse3DI GCAATG 1 cut(s) 240
BseAI TCCGGA 1 cut(s) 60
BseBI CCWGG 3 cut(s) 184, 729, 957
BseDI CCNNGG 3 cut(s) 800, 905, 956
BseGI GGATG 2 cut(s) 92, 213
BseLI CCNNNNNNNGG 2 cut(s) 396, 397
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 2 cut(s) 330, 735
BseNI ACTGG 2 cut(s) 217, 585
BseRI GAGGAG 2 cut(s) 65, 79
BseSI GKGCMC 1 cut(s) 580
BseXI GCAGC 2 cut(s) 604, 1022
Bsh1236I CGCG 2 cut(s) 867, 969
BshFI GGCC 2 cut(s) 670, 901
BsiSI CCGG 1 cut(s) 61
BslI CCNNNNNNNGG 2 cut(s) 396, 397
BsmAI GTCTC 1 cut(s) 683
BsnI GGCC 2 cut(s) 670, 901
Bso31I GGTCTC 1 cut(s) 683
Bsp119I TTCGAA 1 cut(s) 891
Bsp1286I GDGCHC 1 cut(s) 580
Bsp13I TCCGGA 1 cut(s) 60
Bsp143I GATC 3 cut(s) 342, 475, 986
BspACI CCGC 4 cut(s) 19, 155, 611, 865
BspANI GGCC 2 cut(s) 670, 901
BspCNI CTCAG 2 cut(s) 331, 736
BspEI TCCGGA 1 cut(s) 60
BspFNI CGCG 2 cut(s) 867, 969
BspHI TCATGA 1 cut(s) 912
BspLI GGNNCC 1 cut(s) 468
BspMAI CTGCAG 1 cut(s) 410
BspT104I TTCGAA 1 cut(s) 891
BspTNI GGTCTC 1 cut(s) 683
BsrDI GCAATG 1 cut(s) 240
BsrI ACTGG 2 cut(s) 217, 585
BssECI CCNNGG 3 cut(s) 800, 905, 956
BssMI GATC 3 cut(s) 342, 475, 986
BssSI CACGAG 1 cut(s) 785
BssT1I CCWWGG 2 cut(s) 800, 905
Bst2BI CACGAG 1 cut(s) 785
Bst2UI CCWGG 3 cut(s) 184, 729, 957
Bst4CI ACNGT 1 cut(s) 482
BstBAI YACGTR 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 891
BstC8I GCNNGC 5 cut(s) 105, 126, 465, 615, 865
BstDEI CTNAG 4 cut(s) 339, 587, 744, 852
BstF5I GGATG 2 cut(s) 92, 213
BstFNI CGCG 2 cut(s) 867, 969
BstH2I RGCGCY 1 cut(s) 543
BstHHI GCGC 2 cut(s) 542, 969
BstKTI GATC 3 cut(s) 345, 478, 989
BstMAI GTCTC 1 cut(s) 683
BstMBI GATC 3 cut(s) 342, 475, 986
BstMWI GCNNNNNNNGC 2 cut(s) 667, 907
BstNI CCWGG 3 cut(s) 184, 729, 957
BstNSI RCATGY 1 cut(s) 132
BstSCI CCNGG 3 cut(s) 182, 727, 955
BstSFI CTRYAG 1 cut(s) 406
BstSLI GKGCMC 1 cut(s) 580
BstUI CGCG 2 cut(s) 867, 969
BstV1I GCAGC 2 cut(s) 604, 1022
BsuRI GGCC 2 cut(s) 670, 901
BtsCI GGATG 2 cut(s) 92, 213
BtsI GCAGTG 1 cut(s) 427
BtsIMutI CAGTG 2 cut(s) 427, 578
Cac8I GCNNGC 5 cut(s) 105, 126, 465, 615, 865
CciI TCATGA 1 cut(s) 912
CfoI GCGC 2 cut(s) 542, 969
Cfr13I GGNCC 1 cut(s) 899
CviAII CATG 5 cut(s) 129, 277, 317, 658, 913
DdeI CTNAG 4 cut(s) 339, 587, 744, 852
DpnI GATC 3 cut(s) 344, 477, 988
DpnII GATC 3 cut(s) 342, 475, 986
Eco130I CCWWGG 2 cut(s) 800, 905
Eco147I AGGCCT 1 cut(s) 670
Eco31I GGTCTC 1 cut(s) 683
EcoRII CCWGG 3 cut(s) 182, 727, 955
EcoT14I CCWWGG 2 cut(s) 800, 905
ErhI CCWWGG 2 cut(s) 800, 905
FaeI CATG 5 cut(s) 132, 280, 320, 661, 916
FalI AAGNNNNNCTT 4 cut(s) 588, 620, 645, 677
FatI CATG 5 cut(s) 128, 276, 316, 657, 912
FauI CCCGC 1 cut(s) 872
FbaI TGATCA 1 cut(s) 475
FblI GTMKAC 1 cut(s) 646
Fnu4HI GCNGC 2 cut(s) 618, 1011
FokI GGATG 2 cut(s) 99, 200
Fsp4HI GCNGC 2 cut(s) 618, 1011
FspBI CTAG 3 cut(s) 456, 801, 819
GlaI GCGC 2 cut(s) 541, 968
GluI GCNGC 2 cut(s) 618, 1011
GsuI CTGGAG 2 cut(s) 166, 750
HaeII RGCGCY 1 cut(s) 543
HaeIII GGCC 2 cut(s) 670, 901
HapII CCGG 1 cut(s) 61
HhaI GCGC 2 cut(s) 542, 969
Hin1II CATG 5 cut(s) 132, 280, 320, 661, 916
Hin6I GCGC 2 cut(s) 540, 967
HinP1I GCGC 2 cut(s) 540, 967
HinfI GANTC 6 cut(s) 113, 433, 511, 775, 790, 971
HpaII CCGG 1 cut(s) 61
HphI GGTGA 2 cut(s) 262, 569
Hpy166II GTNNAC 1 cut(s) 647
Hpy188I TCNGA 4 cut(s) 79, 340, 376, 432
Hpy188III TCNNGA 3 cut(s) 61, 787, 913
Hpy8I GTNNAC 1 cut(s) 647
HpyAV CCTTC 4 cut(s) 289, 410, 517, 910
HpyCH4III ACNGT 1 cut(s) 482
HpyCH4IV ACGT 1 cut(s) 550
HpyCH4V TGCA 5 cut(s) 124, 149, 408, 595, 1010
HpyF10VI GCNNNNNNNGC 2 cut(s) 667, 907
HpyF3I CTNAG 4 cut(s) 339, 587, 744, 852
HpySE526I ACGT 1 cut(s) 550
Hsp92II CATG 5 cut(s) 132, 280, 320, 661, 916
HspAI GCGC 2 cut(s) 540, 967
Kpn2I TCCGGA 1 cut(s) 60
Ksp22I TGATCA 1 cut(s) 475
Kzo9I GATC 3 cut(s) 342, 475, 986
LmnI GCTCC 4 cut(s) 52, 298, 472, 802
Lsp1109I GCAGC 2 cut(s) 604, 1022
LweI GCATC 1 cut(s) 490
MaeI CTAG 3 cut(s) 456, 801, 819
MaeII ACGT 1 cut(s) 550
MaeIII GTNAC 2 cut(s) 940, 1016
MalI GATC 3 cut(s) 344, 477, 988
MboI GATC 3 cut(s) 342, 475, 986
MboII GAAGA 4 cut(s) 305, 419, 577, 776
MfeI CAATTG 2 cut(s) 289, 846
MhlI GDGCHC 1 cut(s) 580
MlyI GAGTC 4 cut(s) 122, 784, 799, 965
MmeI TCCRAC 1 cut(s) 141
MroI TCCGGA 1 cut(s) 60
MseI TTAA 5 cut(s) 269, 351, 380, 636, 882
MslI CAYNNNNRTG 2 cut(s) 321, 1023
MspA1I CMGCKG 1 cut(s) 613
MspI CCGG 1 cut(s) 61
MspR9I CCNGG 3 cut(s) 184, 729, 957
MunI CAATTG 2 cut(s) 289, 846
MvaI CCWGG 3 cut(s) 184, 729, 957
MvnI CGCG 2 cut(s) 867, 969
MwoI GCNNNNNNNGC 2 cut(s) 667, 907
NdeII GATC 3 cut(s) 342, 475, 986
NlaIII CATG 5 cut(s) 132, 280, 320, 661, 916
NlaIV GGNNCC 1 cut(s) 468
NmuCI GTSAC 1 cut(s) 1016
NspI RCATGY 1 cut(s) 132
NspV TTCGAA 1 cut(s) 891
OliI CACNNNNGTG 1 cut(s) 1023
PagI TCATGA 1 cut(s) 912
PceI AGGCCT 1 cut(s) 670
PfeI GAWTC 2 cut(s) 433, 511
PkrI GCNGC 2 cut(s) 619, 1012
PleI GAGTC 4 cut(s) 121, 783, 798, 965
PpsI GAGTC 4 cut(s) 121, 783, 798, 965
Ppu21I YACGTR 1 cut(s) 551
Psp6I CCWGG 3 cut(s) 182, 727, 955
PspGI CCWGG 3 cut(s) 182, 727, 955
PspN4I GGNNCC 1 cut(s) 468
PspPI GGNCC 1 cut(s) 899
PsrI GAACNNNNNNTAC 2 cut(s) 658, 690
PstI CTGCAG 1 cut(s) 410
RseI CAYNNNNRTG 2 cut(s) 321, 1023
SaqAI TTAA 5 cut(s) 269, 351, 380, 636, 882
SatI GCNGC 2 cut(s) 618, 1011
Sau3AI GATC 3 cut(s) 342, 475, 986
Sau96I GGNCC 1 cut(s) 899
SchI GAGTC 4 cut(s) 122, 784, 799, 965
ScrFI CCNGG 3 cut(s) 184, 729, 957
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 1 cut(s) 490
SfcI CTRYAG 1 cut(s) 406
SfuI TTCGAA 1 cut(s) 891
SmiMI CAYNNNNRTG 2 cut(s) 321, 1023
SseBI AGGCCT 1 cut(s) 670
SsiI CCGC 4 cut(s) 19, 155, 611, 865
SspMI CTAG 3 cut(s) 456, 801, 819
StuI AGGCCT 1 cut(s) 670
StyD4I CCNGG 3 cut(s) 182, 727, 955
StyI CCWWGG 2 cut(s) 800, 905
TaaI ACNGT 1 cut(s) 482
TaiI ACGT 1 cut(s) 553
TaqI TCGA 2 cut(s) 891, 985
TaqII GACCGA 1 cut(s) 707
TfiI GAWTC 2 cut(s) 433, 511
Tru1I TTAA 5 cut(s) 269, 351, 380, 636, 882
Tru9I TTAA 5 cut(s) 269, 351, 380, 636, 882
TscAI CASTG 2 cut(s) 427, 585
TseFI GTSAC 1 cut(s) 1016
TseI GCWGC 2 cut(s) 617, 1010
Tsp45I GTSAC 1 cut(s) 1016
TspDTI ATGAA 5 cut(s) 188, 202, 270, 305, 929
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 2 cut(s) 427, 585
XapI RAATTY 2 cut(s) 172, 208
XceI RCATGY 1 cut(s) 132
XmaJI CCTAGG 1 cut(s) 800
XmiI GTMKAC 1 cut(s) 646
XspI CTAG 3 cut(s) 456, 801, 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.