Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 19 |
| AclWI | GGATC | 1 cut(s) | 96 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 131 |
| AgsI | TTSAA | 2 cut(s) | 41, 208 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 157 |
| AluBI | AGCT | 2 cut(s) | 103, 167 |
| AluI | AGCT | 2 cut(s) | 103, 167 |
| Alw26I | GTCTC | 1 cut(s) | 5 |
| AlwI | GGATC | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 239 |
| AxyI | CCTNAGG | 1 cut(s) | 126 |
| BccI | CCATC | 1 cut(s) | 42 |
| BcoDI | GTCTC | 1 cut(s) | 5 |
| BfaI | CTAG | 1 cut(s) | 18 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 157 |
| BmsI | GCATC | 1 cut(s) | 220 |
| BsaI | GGTCTC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 146 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 131 |
| Bse118I | RCCGGY | 1 cut(s) | 4 |
| Bse1I | ACTGG | 1 cut(s) | 219 |
| Bse21I | CCTNAGG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 1 cut(s) | 146 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 131 |
| BseMII | CTCAG | 2 cut(s) | 140, 196 |
| BseNI | ACTGG | 1 cut(s) | 219 |
| BsgI | GTGCAG | 1 cut(s) | 96 |
| BsiSI | CCGG | 1 cut(s) | 5 |
| BslFI | GGGAC | 1 cut(s) | 164 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 131 |
| BsmAI | GTCTC | 1 cut(s) | 5 |
| BsmFI | GGGAC | 1 cut(s) | 164 |
| Bso31I | GGTCTC | 1 cut(s) | 5 |
| Bsp143I | GATC | 2 cut(s) | 88, 271 |
| BspCNI | CTCAG | 2 cut(s) | 139, 195 |
| BspPI | GGATC | 1 cut(s) | 96 |
| BspTNI | GGTCTC | 1 cut(s) | 5 |
| BsrFI | RCCGGY | 1 cut(s) | 4 |
| BsrI | ACTGG | 1 cut(s) | 219 |
| BssAI | RCCGGY | 1 cut(s) | 4 |
| BssECI | CCNNGG | 1 cut(s) | 146 |
| BssMI | GATC | 2 cut(s) | 88, 271 |
| Bst4CI | ACNGT | 1 cut(s) | 241 |
| BstC8I | GCNNGC | 1 cut(s) | 101 |
| BstDEI | CTNAG | 5 cut(s) | 44, 104, 126, 182, 275 |
| BstDSI | CCRYGG | 1 cut(s) | 146 |
| BstKTI | GATC | 2 cut(s) | 91, 274 |
| BstMAI | GTCTC | 1 cut(s) | 5 |
| BstMBI | GATC | 2 cut(s) | 88, 271 |
| BstNSI | RCATGY | 1 cut(s) | 200 |
| Bsu36I | CCTNAGG | 1 cut(s) | 126 |
| BtgI | CCRYGG | 1 cut(s) | 146 |
| BtsI | GCAGTG | 1 cut(s) | 84 |
| BtsIMutI | CAGTG | 1 cut(s) | 84 |
| Cac8I | GCNNGC | 1 cut(s) | 101 |
| Cfr10I | RCCGGY | 1 cut(s) | 4 |
| CviAII | CATG | 3 cut(s) | 176, 197, 257 |
| CviJI | RGCY | 2 cut(s) | 103, 167 |
| CviKI_1 | RGCY | 2 cut(s) | 103, 167 |
| DdeI | CTNAG | 5 cut(s) | 44, 104, 126, 182, 275 |
| DpnI | GATC | 2 cut(s) | 90, 273 |
| DpnII | GATC | 2 cut(s) | 88, 271 |
| DraI | TTTAAA | 1 cut(s) | 246 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 19 |
| DriI | GACNNNNNGTC | 1 cut(s) | 157 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 19 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 157 |
| Eco31I | GGTCTC | 1 cut(s) | 5 |
| Eco32I | GATATC | 1 cut(s) | 30 |
| Eco81I | CCTNAGG | 1 cut(s) | 126 |
| EcoRV | GATATC | 1 cut(s) | 30 |
| FaeI | CATG | 3 cut(s) | 179, 200, 260 |
| FaiI | YATR | 4 cut(s) | 177, 198, 258, 291 |
| FaqI | GGGAC | 1 cut(s) | 164 |
| FatI | CATG | 3 cut(s) | 175, 196, 256 |
| FspBI | CTAG | 1 cut(s) | 18 |
| HapII | CCGG | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 179, 200, 260 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 2 cut(s) | 158, 180 |
| HpaII | CCGG | 1 cut(s) | 5 |
| HphI | GGTGA | 1 cut(s) | 239 |
| Hpy166II | GTNNAC | 1 cut(s) | 254 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| Hpy8I | GTNNAC | 1 cut(s) | 254 |
| HpyCH4III | ACNGT | 1 cut(s) | 241 |
| HpyCH4IV | ACGT | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 2 cut(s) | 77, 196 |
| HpyF3I | CTNAG | 5 cut(s) | 44, 104, 126, 182, 275 |
| HpySE526I | ACGT | 1 cut(s) | 153 |
| Hsp92II | CATG | 3 cut(s) | 179, 200, 260 |
| Kzo9I | GATC | 2 cut(s) | 88, 271 |
| LpnPI | CCDG | 7 cut(s) | 9, 18, 71, 80, 113, 169, 200 |
| LweI | GCATC | 1 cut(s) | 220 |
| MaeI | CTAG | 1 cut(s) | 18 |
| MaeII | ACGT | 1 cut(s) | 153 |
| MalI | GATC | 2 cut(s) | 90, 273 |
| MboI | GATC | 2 cut(s) | 88, 271 |
| MluCI | AATT | 1 cut(s) | 36 |
| MlyI | GAGTC | 2 cut(s) | 167, 174 |
| MnlI | CCTC | 4 cut(s) | 101, 135, 217, 277 |
| MseI | TTAA | 3 cut(s) | 116, 245, 306 |
| MspI | CCGG | 1 cut(s) | 5 |
| NdeII | GATC | 2 cut(s) | 88, 271 |
| NlaIII | CATG | 3 cut(s) | 179, 200, 260 |
| NspI | RCATGY | 1 cut(s) | 200 |
| PleI | GAGTC | 2 cut(s) | 166, 174 |
| PpsI | GAGTC | 2 cut(s) | 166, 174 |
| SaqAI | TTAA | 3 cut(s) | 116, 245, 306 |
| Sau3AI | GATC | 2 cut(s) | 88, 271 |
| SchI | GAGTC | 2 cut(s) | 167, 174 |
| SetI | ASST | 8 cut(s) | 23, 76, 105, 112, 132, 156, 169, 188 |
| SfaNI | GCATC | 1 cut(s) | 220 |
| Sse9I | AATT | 1 cut(s) | 36 |
| SspMI | CTAG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 241 |
| TaiI | ACGT | 1 cut(s) | 156 |
| TasI | AATT | 1 cut(s) | 36 |
| Tru1I | TTAA | 3 cut(s) | 116, 245, 306 |
| Tru9I | TTAA | 3 cut(s) | 116, 245, 306 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TspDTI | ATGAA | 1 cut(s) | 164 |
| TspGWI | ACGGA | 1 cut(s) | 135 |
| TspRI | CASTG | 1 cut(s) | 84 |
| XceI | RCATGY | 1 cut(s) | 200 |
| XspI | CTAG | 1 cut(s) | 18 |