Rroxscaffold_2G00112940

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000072
Physical Location & Seq
Forward (+)
38379331 .. 38387924
8594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00112940.1

Sequence Viewer

Length: 1065 bp
ATGCCGGTTACTTGTAGGTCAATCTTCATCCGAGCACAACCAGTTTCAAATTTGATTCCATCGGGATTTGGTGAGGGGACTTCACACGAAGGCTTGAGTAAGGAATGGGCTTCTCTTGGTCGAAGGTACTTTGGAAGAAGACAGAAGAGGGACTTGTGGAGTGGCGGACGCAGCAGTAGCCGGTCCCTATATCCTTTGTTGGGCTCGGGAGTATGGCGGAGCCTTGCGGTCTTACATCACACGATCGAACAAGGATGGTCAGAGATATATGAAGTAAGTTGCACCAAACCACCAACAAATACTGCATATAGTCATTTTTACTTTATAACCATAACAGCTGACATATATGAGAAGAATGGAAGCTTTAGCGTTAAATCTGGTGTGTGGCTTGCAAGGGAGCTGAGCAGCAAGAAAGCAGGAGGCCCAGGTGGTAGTGGAGGGTTTAATAAATGGCAACTGTCTGGGATAAATTGTGGGAAGAAAGAGGCCGAAATCGCCCAAAATCGCTCAAATCCGAAATTCGTCTTCCTCGGTTTGAATCGAGATGTGAAACTTGGTGAGTTTGTAGAGCATGGCAAGGCGAACAAAGCCCAGTTGGTCTCCCCTCCTACTTTTGCCGGAGTTGGCTGGAATTTGAAGAAATGTCGGAAAAGTGGTCGACCTTCTTTGCTTCGATTCGTTGGTATTACAGTATGGCATGAACCCCGCTTCATAGGTTTATTTGATCATGTTTCCAACTTCCCGAATGAATTGGCGTTGTTTGGAGTCATGGCCTGGCTAGTATGGAAGAGTAGAAATGCATGCCGGTTTGGAGAAAAAGCTAGTTCTGGTGAACAAATTGTCCTTCAGGCCAAAGAGTGGCTTTCCAACTTTCGGGGGGCAAATTCAAGGTCGTACCTATTTTGTCTTCTCGCTCCTTCAATTATGTCTTCTATTCCAATTCCTAGTTCGTGCACTAATGACAAGTGGATTCCACCGAAGCCTCCTTTCCTCAAACTAAATGTTGATGCTGCAATTGACCATAAGAGGAGTAAAGTTGGGTTGGGTGGAGTGGTCGAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

354

Amino Acids

39.25

Weight (kDa)

9.97

Isoelectric Point (pI)

49.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 326
AccB7I CCANNNNNTGG 1 cut(s) 858
AccI GTMKAC 1 cut(s) 658
AciI CCGC 4 cut(s) 165, 217, 227, 706
AcsI RAATTY 4 cut(s) 49, 518, 631, 883
AcuI CTGAAG 1 cut(s) 830
AfaI GTAC 2 cut(s) 128, 896
AfiI CCNNNNNNNGG 3 cut(s) 200, 858, 873
AgsI TTSAA 5 cut(s) 48, 538, 637, 888, 921
AjnI CCWGG 2 cut(s) 424, 773
AjuI GAANNNNNNNTTGG 2 cut(s) 931, 963
AloI GAACNNNNNNTCC 2 cut(s) 825, 857
AluBI AGCT 4 cut(s) 338, 363, 400, 821
AluI AGCT 4 cut(s) 338, 363, 400, 821
Alw21I GWGCWC 2 cut(s) 37, 956
Alw26I GTCTC 1 cut(s) 604
Alw44I GTGCAC 1 cut(s) 952
Ama87I CYCGRG 1 cut(s) 205
AoxI GGCC 4 cut(s) 421, 486, 771, 849
ApaLI GTGCAC 1 cut(s) 952
ApeKI GCWGC 3 cut(s) 171, 405, 1010
ApoI RAATTY 4 cut(s) 49, 518, 631, 883
ArsI GACNNNNNNTTYG 2 cut(s) 875, 907
AspS9I GGNCC 2 cut(s) 183, 422
AsuHPI GGTGA 3 cut(s) 83, 569, 842
AvaI CYCGRG 1 cut(s) 205
AvaII GGWCC 1 cut(s) 183
BaeGI GKGCMC 1 cut(s) 956
BanII GRGCYC 1 cut(s) 206
BbsI GAAGAC 4 cut(s) 145, 517, 899, 921
Bbv12I GWGCWC 2 cut(s) 37, 956
BbvI GCAGC 3 cut(s) 183, 417, 997
BccI CCATC 2 cut(s) 67, 249
BciT130I CCWGG 2 cut(s) 426, 775
BclI TGATCA 1 cut(s) 724
BcoDI GTCTC 1 cut(s) 604
BfaI CTAG 3 cut(s) 779, 822, 945
BisI GCNGC 3 cut(s) 172, 406, 1011
BlpI GCTNAGC 1 cut(s) 401
BlsI GCNGC 3 cut(s) 173, 407, 1012
Bme1390I CCNGG 2 cut(s) 426, 775
Bme18I GGWCC 1 cut(s) 183
BmeT110I CYCGRG 1 cut(s) 205
BmgT120I GGNCC 2 cut(s) 183, 422
BmiI GGNNCC 2 cut(s) 185, 221
BmrFI CCNGG 2 cut(s) 426, 775
BmrI ACTGGG 1 cut(s) 586
BmsI GCATC 1 cut(s) 997
BmuI ACTGGG 1 cut(s) 586
BpiI GAAGAC 4 cut(s) 145, 517, 899, 921
Bpu1102I GCTNAGC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 115
BsaI GGTCTC 1 cut(s) 604
BsaJI CCNNGG 2 cut(s) 424, 529
Bsc4I CCNNNNNNNGG 3 cut(s) 200, 858, 873
Bse118I RCCGGY 3 cut(s) 4, 180, 804
Bse1I ACTGG 2 cut(s) 41, 592
BseBI CCWGG 2 cut(s) 426, 775
BseDI CCNNGG 2 cut(s) 424, 529
BseGI GGATG 2 cut(s) 27, 260
BseLI CCNNNNNNNGG 3 cut(s) 200, 858, 873
BseMII CTCAG 1 cut(s) 392
BseNI ACTGG 2 cut(s) 41, 592
BseRI GAGGAG 1 cut(s) 1042
BseSI GKGCMC 1 cut(s) 956
BseXI GCAGC 3 cut(s) 183, 417, 997
Bsh1285I CGRYCG 1 cut(s) 246
BshFI GGCC 4 cut(s) 423, 488, 773, 851
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 2 cut(s) 37, 956
BsiHKCI CYCGRG 1 cut(s) 205
BsiSI CCGG 4 cut(s) 5, 181, 618, 805
BslFI GGGAC 3 cut(s) 91, 164, 169
BslI CCNNNNNNNGG 3 cut(s) 200, 858, 873
BsmAI GTCTC 1 cut(s) 604
BsmFI GGGAC 3 cut(s) 91, 164, 169
BsnI GGCC 4 cut(s) 423, 488, 773, 851
Bso31I GGTCTC 1 cut(s) 604
BsoBI CYCGRG 1 cut(s) 205
Bsp1286I GDGCHC 3 cut(s) 37, 206, 956
Bsp143I GATC 2 cut(s) 243, 724
Bsp1720I GCTNAGC 1 cut(s) 401
BspACI CCGC 4 cut(s) 165, 217, 227, 706
BspANI GGCC 4 cut(s) 423, 488, 773, 851
BspCNI CTCAG 1 cut(s) 393
BspLI GGNNCC 2 cut(s) 185, 221
BspTNI GGTCTC 1 cut(s) 604
BsrFI RCCGGY 3 cut(s) 4, 180, 804
BsrI ACTGG 2 cut(s) 41, 592
BssAI RCCGGY 3 cut(s) 4, 180, 804
BssECI CCNNGG 2 cut(s) 424, 529
BssMI GATC 2 cut(s) 243, 724
Bst2UI CCWGG 2 cut(s) 426, 775
Bst4CI ACNGT 2 cut(s) 459, 691
Bst6I CTCTTC 2 cut(s) 140, 782
BstC8I GCNNGC 2 cut(s) 390, 802
BstDEI CTNAG 1 cut(s) 401
BstF5I GGATG 2 cut(s) 27, 260
BstKTI GATC 2 cut(s) 246, 727
BstMAI GTCTC 1 cut(s) 604
BstMBI GATC 2 cut(s) 243, 724
BstMCI CGRYCG 1 cut(s) 246
BstMWI GCNNNNNNNGC 4 cut(s) 171, 177, 494, 587
BstNI CCWGG 2 cut(s) 426, 775
BstNSI RCATGY 1 cut(s) 804
BstSCI CCNGG 2 cut(s) 424, 773
BstSLI GKGCMC 1 cut(s) 956
BstV1I GCAGC 3 cut(s) 183, 417, 997
BstV2I GAAGAC 4 cut(s) 145, 517, 899, 921
BsuRI GGCC 4 cut(s) 423, 488, 773, 851
BtsCI GGATG 2 cut(s) 27, 260
Cac8I GCNNGC 2 cut(s) 390, 802
Cfr10I RCCGGY 3 cut(s) 4, 180, 804
Cfr13I GGNCC 2 cut(s) 183, 422
CseI GACGC 1 cut(s) 177
Csp6I GTAC 2 cut(s) 127, 895
CviAII CATG 5 cut(s) 572, 698, 728, 769, 801
CviQI GTAC 2 cut(s) 127, 895
DdeI CTNAG 1 cut(s) 401
DpnI GATC 2 cut(s) 245, 726
DpnII GATC 2 cut(s) 243, 724
Eam1104I CTCTTC 2 cut(s) 140, 782
EarI CTCTTC 2 cut(s) 140, 782
EciI GGCGGA 2 cut(s) 180, 232
Eco24I GRGCYC 1 cut(s) 206
Eco31I GGTCTC 1 cut(s) 604
Eco47I GGWCC 1 cut(s) 183
Eco57I CTGAAG 1 cut(s) 830
Eco88I CYCGRG 1 cut(s) 205
EcoRII CCWGG 2 cut(s) 424, 773
EcoT22I ATGCAT 1 cut(s) 802
EcoT38I GRGCYC 1 cut(s) 206
FaeI CATG 5 cut(s) 575, 701, 731, 772, 804
FalI AAGNNNNNCTT 4 cut(s) 137, 169, 846, 878
FaqI GGGAC 3 cut(s) 91, 164, 169
FatI CATG 5 cut(s) 571, 697, 727, 768, 800
FauI CCCGC 1 cut(s) 713
FbaI TGATCA 1 cut(s) 724
FblI GTMKAC 1 cut(s) 658
Fnu4HI GCNGC 3 cut(s) 172, 406, 1011
FokI GGATG 2 cut(s) 14, 267
FriOI GRGCYC 1 cut(s) 206
Fsp4HI GCNGC 3 cut(s) 172, 406, 1011
FspBI CTAG 3 cut(s) 779, 822, 945
GluI GCNGC 3 cut(s) 172, 406, 1011
HaeIII GGCC 4 cut(s) 423, 488, 773, 851
HapII CCGG 4 cut(s) 5, 181, 618, 805
HgaI GACGC 1 cut(s) 177
Hin1II CATG 5 cut(s) 575, 701, 731, 772, 804
HincII GTYRAC 1 cut(s) 659
HindII GTYRAC 1 cut(s) 659
HindIII AAGCTT 1 cut(s) 361
HinfI GANTC 5 cut(s) 55, 538, 675, 765, 970
HpaII CCGG 4 cut(s) 5, 181, 618, 805
HphI GGTGA 3 cut(s) 83, 569, 842
Hpy166II GTNNAC 3 cut(s) 659, 833, 954
Hpy188I TCNGA 4 cut(s) 32, 262, 516, 648
Hpy188III TCNNGA 5 cut(s) 63, 207, 542, 742, 1057
Hpy8I GTNNAC 3 cut(s) 659, 833, 954
HpyAV CCTTC 5 cut(s) 83, 117, 672, 854, 927
HpyCH4III ACNGT 2 cut(s) 459, 691
HpyCH4V TGCA 6 cut(s) 282, 305, 392, 800, 954, 1013
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 177, 494, 587
HpyF3I CTNAG 1 cut(s) 401
Hsp92II CATG 5 cut(s) 575, 701, 731, 772, 804
Ksp22I TGATCA 1 cut(s) 724
Kzo9I GATC 2 cut(s) 243, 724
LmnI GCTCC 3 cut(s) 219, 397, 919
Lsp1109I GCAGC 3 cut(s) 183, 417, 997
LweI GCATC 1 cut(s) 997
MaeI CTAG 3 cut(s) 779, 822, 945
MaeIII GTNAC 1 cut(s) 7
MalI GATC 2 cut(s) 245, 726
MboI GATC 2 cut(s) 243, 724
MfeI CAATTG 1 cut(s) 1014
MhlI GDGCHC 3 cut(s) 37, 206, 956
MlyI GAGTC 1 cut(s) 774
MmeI TCCRAC 3 cut(s) 626, 759, 891
Mph1103I ATGCAT 1 cut(s) 802
MseI TTAA 2 cut(s) 372, 444
MspA1I CMGCKG 1 cut(s) 338
MspI CCGG 4 cut(s) 5, 181, 618, 805
MspR9I CCNGG 2 cut(s) 426, 775
MunI CAATTG 1 cut(s) 1014
MvaI CCWGG 2 cut(s) 426, 775
MwoI GCNNNNNNNGC 4 cut(s) 171, 177, 494, 587
NdeII GATC 2 cut(s) 243, 724
NlaIII CATG 5 cut(s) 575, 701, 731, 772, 804
NlaIV GGNNCC 2 cut(s) 185, 221
NsiI ATGCAT 1 cut(s) 802
NspI RCATGY 1 cut(s) 804
PaeI GCATGC 1 cut(s) 804
PfeI GAWTC 4 cut(s) 55, 538, 675, 970
PflMI CCANNNNNTGG 1 cut(s) 858
PkrI GCNGC 3 cut(s) 173, 407, 1012
Ple19I CGATCG 1 cut(s) 246
PleI GAGTC 1 cut(s) 773
PpsI GAGTC 1 cut(s) 773
PsiI TTATAA 1 cut(s) 326
Psp6I CCWGG 2 cut(s) 424, 773
PspGI CCWGG 2 cut(s) 424, 773
PspN4I GGNNCC 2 cut(s) 185, 221
PspPI GGNCC 2 cut(s) 183, 422
PvuI CGATCG 1 cut(s) 246
PvuII CAGCTG 1 cut(s) 338
RsaI GTAC 2 cut(s) 128, 896
RsaNI GTAC 2 cut(s) 127, 895
SalI GTCGAC 1 cut(s) 657
SaqAI TTAA 2 cut(s) 372, 444
SatI GCNGC 3 cut(s) 172, 406, 1011
Sau3AI GATC 2 cut(s) 243, 724
Sau96I GGNCC 2 cut(s) 183, 422
SchI GAGTC 1 cut(s) 774
ScrFI CCNGG 2 cut(s) 426, 775
SduI GDGCHC 3 cut(s) 37, 206, 956
SfaNI GCATC 1 cut(s) 997
SinI GGWCC 1 cut(s) 183
SmlI CTYRAG 1 cut(s) 94
SmoI CTYRAG 1 cut(s) 94
SphI GCATGC 1 cut(s) 804
SsiI CCGC 4 cut(s) 165, 217, 227, 706
SspMI CTAG 3 cut(s) 779, 822, 945
StyD4I CCNGG 2 cut(s) 424, 773
TaaI ACNGT 2 cut(s) 459, 691
TaqI TCGA 6 cut(s) 121, 246, 541, 658, 673, 1056
TfiI GAWTC 4 cut(s) 55, 538, 675, 970
Tru1I TTAA 2 cut(s) 372, 444
Tru9I TTAA 2 cut(s) 372, 444
TseI GCWGC 3 cut(s) 171, 405, 1010
TspDTI ATGAA 5 cut(s) 16, 285, 700, 714, 762
Van91I CCANNNNNTGG 1 cut(s) 858
VneI GTGCAC 1 cut(s) 952
VpaK11BI GGWCC 1 cut(s) 183
XapI RAATTY 4 cut(s) 49, 518, 631, 883
XceI RCATGY 1 cut(s) 804
XmiI GTMKAC 1 cut(s) 658
XspI CTAG 3 cut(s) 779, 822, 945
Zsp2I ATGCAT 1 cut(s) 802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.