Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 245 |
| AciI | CCGC | 3 cut(s) | 245, 257, 298 |
| AflIII | ACRYGT | 1 cut(s) | 32 |
| AgsI | TTSAA | 1 cut(s) | 214 |
| AhlI | ACTAGT | 1 cut(s) | 202 |
| Alw26I | GTCTC | 1 cut(s) | 104 |
| Ama87I | CYCGRG | 1 cut(s) | 285 |
| AoxI | GGCC | 2 cut(s) | 97, 320 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 103, 135 |
| AspS9I | GGNCC | 1 cut(s) | 320 |
| AsuC2I | CCSGG | 2 cut(s) | 286, 287 |
| AvaI | CYCGRG | 1 cut(s) | 285 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 165, 198 |
| BauI | CACGAG | 1 cut(s) | 101 |
| BcnI | CCSGG | 2 cut(s) | 286, 287 |
| BcoDI | GTCTC | 1 cut(s) | 104 |
| BcuI | ACTAGT | 1 cut(s) | 202 |
| BfaI | CTAG | 2 cut(s) | 203, 240 |
| BisI | GCNGC | 2 cut(s) | 246, 258 |
| BlsI | GCNGC | 2 cut(s) | 247, 259 |
| Bme1390I | CCNGG | 2 cut(s) | 286, 287 |
| BmeT110I | CYCGRG | 1 cut(s) | 285 |
| BmgT120I | GGNCC | 1 cut(s) | 320 |
| BmrFI | CCNGG | 2 cut(s) | 286, 287 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 35, 67 |
| BpmI | CTGGAG | 1 cut(s) | 294 |
| BpuMI | CCSGG | 2 cut(s) | 286, 287 |
| BsaJI | CCNNGG | 2 cut(s) | 285, 286 |
| Bse1I | ACTGG | 1 cut(s) | 100 |
| BseDI | CCNNGG | 2 cut(s) | 285, 286 |
| BseMII | CTCAG | 1 cut(s) | 33 |
| BseNI | ACTGG | 1 cut(s) | 100 |
| BshFI | GGCC | 2 cut(s) | 99, 322 |
| BsiHKCI | CYCGRG | 1 cut(s) | 285 |
| BsiSI | CCGG | 1 cut(s) | 286 |
| BsmAI | GTCTC | 1 cut(s) | 104 |
| BsmI | GAATGC | 1 cut(s) | 161 |
| BsnI | GGCC | 2 cut(s) | 99, 322 |
| BsoBI | CYCGRG | 1 cut(s) | 285 |
| BspACI | CCGC | 3 cut(s) | 245, 257, 298 |
| BspANI | GGCC | 2 cut(s) | 99, 322 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BsrBI | CCGCTC | 1 cut(s) | 245 |
| BsrI | ACTGG | 1 cut(s) | 100 |
| BssECI | CCNNGG | 2 cut(s) | 285, 286 |
| BssSI | CACGAG | 1 cut(s) | 101 |
| Bst2BI | CACGAG | 1 cut(s) | 101 |
| BstDEI | CTNAG | 1 cut(s) | 42 |
| BstMAI | GTCTC | 1 cut(s) | 104 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 254, 263 |
| BstNSI | RCATGY | 2 cut(s) | 36, 236 |
| BstSCI | CCNGG | 2 cut(s) | 284, 285 |
| BsuRI | GGCC | 2 cut(s) | 99, 322 |
| Cfr13I | GGNCC | 1 cut(s) | 320 |
| Cfr9I | CCCGGG | 1 cut(s) | 285 |
| CviAII | CATG | 3 cut(s) | 33, 233, 263 |
| CviJI | RGCY | 6 cut(s) | 77, 99, 128, 248, 260, 322 |
| CviKI_1 | RGCY | 6 cut(s) | 77, 99, 128, 248, 260, 322 |
| DdeI | CTNAG | 1 cut(s) | 42 |
| EciI | GGCGGA | 1 cut(s) | 313 |
| Eco88I | CYCGRG | 1 cut(s) | 285 |
| FaeI | CATG | 3 cut(s) | 36, 236, 266 |
| FaiI | YATR | 5 cut(s) | 34, 80, 234, 254, 264 |
| FatI | CATG | 3 cut(s) | 32, 232, 262 |
| Fnu4HI | GCNGC | 2 cut(s) | 246, 258 |
| Fsp4HI | GCNGC | 2 cut(s) | 246, 258 |
| FspBI | CTAG | 2 cut(s) | 203, 240 |
| GluI | GCNGC | 2 cut(s) | 246, 258 |
| GsuI | CTGGAG | 1 cut(s) | 294 |
| HaeIII | GGCC | 2 cut(s) | 99, 322 |
| HapII | CCGG | 1 cut(s) | 286 |
| Hin1II | CATG | 3 cut(s) | 36, 236, 266 |
| HinfI | GANTC | 1 cut(s) | 189 |
| HpaII | CCGG | 1 cut(s) | 286 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 1 cut(s) | 194 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 164 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 254, 263 |
| HpyF3I | CTNAG | 1 cut(s) | 42 |
| Hsp92II | CATG | 3 cut(s) | 36, 236, 266 |
| LmnI | GCTCC | 1 cut(s) | 184 |
| LpnPI | CCDG | 3 cut(s) | 81, 258, 299 |
| MaeI | CTAG | 2 cut(s) | 203, 240 |
| MaeIII | GTNAC | 2 cut(s) | 198, 280 |
| MbiI | CCGCTC | 1 cut(s) | 245 |
| MboII | GAAGA | 2 cut(s) | 33, 182 |
| MmeI | TCCRAC | 1 cut(s) | 71 |
| MnlI | CCTC | 3 cut(s) | 3, 110, 118 |
| MseI | TTAA | 1 cut(s) | 26 |
| MspI | CCGG | 1 cut(s) | 286 |
| MspR9I | CCNGG | 2 cut(s) | 286, 287 |
| Mva1269I | GAATGC | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 254, 263 |
| NciI | CCSGG | 2 cut(s) | 286, 287 |
| NlaIII | CATG | 3 cut(s) | 36, 236, 266 |
| NspI | RCATGY | 2 cut(s) | 36, 236 |
| PciI | ACATGT | 1 cut(s) | 32 |
| PctI | GAATGC | 1 cut(s) | 161 |
| PfeI | GAWTC | 1 cut(s) | 189 |
| PkrI | GCNGC | 2 cut(s) | 247, 259 |
| PscI | ACATGT | 1 cut(s) | 32 |
| PspPI | GGNCC | 1 cut(s) | 320 |
| SaqAI | TTAA | 1 cut(s) | 26 |
| SatI | GCNGC | 2 cut(s) | 246, 258 |
| Sau96I | GGNCC | 1 cut(s) | 320 |
| ScrFI | CCNGG | 2 cut(s) | 286, 287 |
| SetI | ASST | 1 cut(s) | 91 |
| SmaI | CCCGGG | 1 cut(s) | 287 |
| SpeI | ACTAGT | 1 cut(s) | 202 |
| SsiI | CCGC | 3 cut(s) | 245, 257, 298 |
| SspI | AATATT | 1 cut(s) | 226 |
| SspMI | CTAG | 2 cut(s) | 203, 240 |
| StyD4I | CCNGG | 2 cut(s) | 284, 285 |
| TauI | GCSGC | 2 cut(s) | 248, 260 |
| TfiI | GAWTC | 1 cut(s) | 189 |
| Tru1I | TTAA | 1 cut(s) | 26 |
| Tru9I | TTAA | 1 cut(s) | 26 |
| TspDTI | ATGAA | 1 cut(s) | 168 |
| TspMI | CCCGGG | 1 cut(s) | 285 |
| XceI | RCATGY | 2 cut(s) | 36, 236 |
| XmaI | CCCGGG | 1 cut(s) | 285 |
| XspI | CTAG | 2 cut(s) | 203, 240 |