ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 205 |
| Acc36I | ACCTGC | 1 cut(s) | 205 |
| AciI | CCGC | 1 cut(s) | 226 |
| AcsI | RAATTY | 1 cut(s) | 177 |
| AfaI | GTAC | 1 cut(s) | 35 |
| AluBI | AGCT | 5 cut(s) | 78, 96, 174, 252, 268 |
| AluI | AGCT | 5 cut(s) | 78, 96, 174, 252, 268 |
| Alw21I | GWGCWC | 1 cut(s) | 285 |
| AoxI | GGCC | 2 cut(s) | 20, 326 |
| ApeKI | GCWGC | 3 cut(s) | 75, 93, 147 |
| ApoI | RAATTY | 1 cut(s) | 177 |
| AspLEI | GCGC | 1 cut(s) | 75 |
| Bbv12I | GWGCWC | 1 cut(s) | 285 |
| BbvI | GCAGC | 3 cut(s) | 87, 105, 159 |
| BclI | TGATCA | 1 cut(s) | 114 |
| BfaI | CTAG | 2 cut(s) | 31, 330 |
| BfuAI | ACCTGC | 1 cut(s) | 205 |
| BglII | AGATCT | 1 cut(s) | 121 |
| BisI | GCNGC | 3 cut(s) | 76, 94, 148 |
| BlsI | GCNGC | 3 cut(s) | 77, 95, 149 |
| BmrI | ACTGGG | 1 cut(s) | 268 |
| BmsI | GCATC | 2 cut(s) | 80, 176 |
| BmuI | ACTGGG | 1 cut(s) | 268 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 111, 143 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| Bse1I | ACTGG | 1 cut(s) | 274 |
| BseMII | CTCAG | 1 cut(s) | 175 |
| BseNI | ACTGG | 1 cut(s) | 274 |
| BseRI | GAGGAG | 1 cut(s) | 61 |
| BseXI | GCAGC | 3 cut(s) | 87, 105, 159 |
| BshFI | GGCC | 2 cut(s) | 22, 328 |
| BsiHKAI | GWGCWC | 1 cut(s) | 285 |
| BsnI | GGCC | 2 cut(s) | 22, 328 |
| Bsp1286I | GDGCHC | 1 cut(s) | 285 |
| Bsp143I | GATC | 3 cut(s) | 27, 114, 121 |
| BspACI | CCGC | 1 cut(s) | 226 |
| BspANI | GGCC | 2 cut(s) | 22, 328 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspMI | ACCTGC | 1 cut(s) | 205 |
| BsrI | ACTGG | 1 cut(s) | 274 |
| BssMI | GATC | 3 cut(s) | 27, 114, 121 |
| Bst6I | CTCTTC | 1 cut(s) | 53 |
| BstC8I | GCNNGC | 2 cut(s) | 192, 250 |
| BstDEI | CTNAG | 2 cut(s) | 10, 161 |
| BstHHI | GCGC | 1 cut(s) | 75 |
| BstKTI | GATC | 3 cut(s) | 30, 117, 124 |
| BstMBI | GATC | 3 cut(s) | 27, 114, 121 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 307 |
| BstV1I | GCAGC | 3 cut(s) | 87, 105, 159 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BsuRI | GGCC | 2 cut(s) | 22, 328 |
| BtsIMutI | CAGTG | 2 cut(s) | 23, 286 |
| BveI | ACCTGC | 1 cut(s) | 205 |
| Cac8I | GCNNGC | 2 cut(s) | 192, 250 |
| CfoI | GCGC | 1 cut(s) | 75 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviAII | CATG | 1 cut(s) | 324 |
| CviQI | GTAC | 1 cut(s) | 34 |
| DdeI | CTNAG | 2 cut(s) | 10, 161 |
| DpnI | GATC | 3 cut(s) | 29, 116, 123 |
| DpnII | GATC | 3 cut(s) | 27, 114, 121 |
| Eam1104I | CTCTTC | 1 cut(s) | 53 |
| EarI | CTCTTC | 1 cut(s) | 53 |
| FaeI | CATG | 1 cut(s) | 327 |
| FaiI | YATR | 2 cut(s) | 107, 325 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 62, 94 |
| FatI | CATG | 1 cut(s) | 323 |
| FbaI | TGATCA | 1 cut(s) | 114 |
| Fnu4HI | GCNGC | 3 cut(s) | 76, 94, 148 |
| Fsp4HI | GCNGC | 3 cut(s) | 76, 94, 148 |
| FspBI | CTAG | 2 cut(s) | 31, 330 |
| GlaI | GCGC | 1 cut(s) | 74 |
| GluI | GCNGC | 3 cut(s) | 76, 94, 148 |
| HaeIII | GGCC | 2 cut(s) | 22, 328 |
| HhaI | GCGC | 1 cut(s) | 75 |
| Hin1II | CATG | 1 cut(s) | 327 |
| Hin6I | GCGC | 1 cut(s) | 73 |
| HinP1I | GCGC | 1 cut(s) | 73 |
| HinfI | GANTC | 2 cut(s) | 157, 241 |
| Hpy166II | GTNNAC | 1 cut(s) | 102 |
| Hpy188I | TCNGA | 2 cut(s) | 119, 164 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| Hpy8I | GTNNAC | 1 cut(s) | 102 |
| HpyAV | CCTTC | 1 cut(s) | 198 |
| HpyCH4V | TGCA | 7 cut(s) | 93, 200, 214, 262, 301, 316, 323 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 307 |
| HpyF3I | CTNAG | 2 cut(s) | 10, 161 |
| Hsp92II | CATG | 1 cut(s) | 327 |
| HspAI | GCGC | 1 cut(s) | 73 |
| Ksp22I | TGATCA | 1 cut(s) | 114 |
| Kzo9I | GATC | 3 cut(s) | 27, 114, 121 |
| LpnPI | CCDG | 4 cut(s) | 167, 200, 230, 287 |
| Lsp1109I | GCAGC | 3 cut(s) | 87, 105, 159 |
| LweI | GCATC | 2 cut(s) | 80, 176 |
| MaeI | CTAG | 2 cut(s) | 31, 330 |
| MalI | GATC | 3 cut(s) | 29, 116, 123 |
| MboI | GATC | 3 cut(s) | 27, 114, 121 |
| MboII | GAAGA | 2 cut(s) | 70, 145 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MhlI | GDGCHC | 1 cut(s) | 285 |
| MluCI | AATT | 1 cut(s) | 177 |
| MlyI | GAGTC | 1 cut(s) | 151 |
| MnlI | CCTC | 4 cut(s) | 12, 39, 133, 300 |
| MseI | TTAA | 2 cut(s) | 80, 232 |
| MslI | CAYNNNNRTG | 1 cut(s) | 110 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 307 |
| NdeII | GATC | 3 cut(s) | 27, 114, 121 |
| NlaIII | CATG | 1 cut(s) | 327 |
| PaqCI | CACCTGC | 1 cut(s) | 205 |
| PfeI | GAWTC | 1 cut(s) | 241 |
| PkrI | GCNGC | 3 cut(s) | 77, 95, 149 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| RseI | CAYNNNNRTG | 1 cut(s) | 110 |
| SaqAI | TTAA | 2 cut(s) | 80, 232 |
| SatI | GCNGC | 3 cut(s) | 76, 94, 148 |
| Sau3AI | GATC | 3 cut(s) | 27, 114, 121 |
| SchI | GAGTC | 1 cut(s) | 151 |
| SduI | GDGCHC | 1 cut(s) | 285 |
| SetI | ASST | 9 cut(s) | 80, 98, 144, 156, 176, 219, 254, 261, 270 |
| SfaNI | GCATC | 2 cut(s) | 80, 176 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 110 |
| SmlI | CTYRAG | 1 cut(s) | 128 |
| SmoI | CTYRAG | 1 cut(s) | 128 |
| Sse9I | AATT | 1 cut(s) | 177 |
| SsiI | CCGC | 1 cut(s) | 226 |
| SspMI | CTAG | 2 cut(s) | 31, 330 |
| TaqI | TCGA | 1 cut(s) | 39 |
| TasI | AATT | 1 cut(s) | 177 |
| TatI | WGTACW | 1 cut(s) | 33 |
| TfiI | GAWTC | 1 cut(s) | 241 |
| Tru1I | TTAA | 2 cut(s) | 80, 232 |
| Tru9I | TTAA | 2 cut(s) | 80, 232 |
| TscAI | CASTG | 2 cut(s) | 30, 293 |
| TseI | GCWGC | 3 cut(s) | 75, 93, 147 |
| TspGWI | ACGGA | 1 cut(s) | 319 |
| TspRI | CASTG | 2 cut(s) | 30, 293 |
| XapI | RAATTY | 1 cut(s) | 177 |
| XspI | CTAG | 2 cut(s) | 31, 330 |