Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 674 |
| AciI | CCGC | 4 cut(s) | 119, 375, 518, 609 |
| AclWI | GGATC | 1 cut(s) | 355 |
| AfaI | GTAC | 1 cut(s) | 40 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 381, 554, 580, 674 |
| AgsI | TTSAA | 3 cut(s) | 649, 760, 766 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 391, 423 |
| AluBI | AGCT | 7 cut(s) | 70, 146, 341, 455, 491, 704, 821 |
| AluI | AGCT | 7 cut(s) | 70, 146, 341, 455, 491, 704, 821 |
| Alw26I | GTCTC | 1 cut(s) | 624 |
| AlwI | GGATC | 1 cut(s) | 355 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 344 |
| AoxI | GGCC | 1 cut(s) | 721 |
| ApeKI | GCWGC | 4 cut(s) | 143, 217, 443, 515 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 128 |
| AspS9I | GGNCC | 1 cut(s) | 319 |
| AsuHPI | GGTGA | 2 cut(s) | 133, 364 |
| AvaII | GGWCC | 1 cut(s) | 319 |
| BaeGI | GKGCMC | 1 cut(s) | 561 |
| BanII | GRGCYC | 2 cut(s) | 303, 586 |
| BbvI | GCAGC | 4 cut(s) | 155, 204, 430, 502 |
| BccI | CCATC | 2 cut(s) | 330, 572 |
| BcoDI | GTCTC | 1 cut(s) | 624 |
| BfaI | CTAG | 3 cut(s) | 36, 170, 180 |
| BfmI | CTRYAG | 2 cut(s) | 696, 816 |
| BglII | AGATCT | 2 cut(s) | 423, 692 |
| BisI | GCNGC | 5 cut(s) | 144, 218, 444, 516, 519 |
| BlsI | GCNGC | 5 cut(s) | 145, 219, 445, 517, 520 |
| Bme18I | GGWCC | 1 cut(s) | 319 |
| BmgT120I | GGNCC | 1 cut(s) | 319 |
| BmiI | GGNNCC | 2 cut(s) | 300, 432 |
| BmsI | GCATC | 2 cut(s) | 580, 762 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 381, 554, 580, 674 |
| Bse1I | ACTGG | 2 cut(s) | 349, 360 |
| Bse3DI | GCAATG | 2 cut(s) | 197, 710 |
| BseGI | GGATG | 2 cut(s) | 53, 777 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 381, 554, 580, 674 |
| BseMI | GCAATG | 2 cut(s) | 197, 710 |
| BseMII | CTCAG | 3 cut(s) | 547, 794, 815 |
| BseNI | ACTGG | 2 cut(s) | 349, 360 |
| BseSI | GKGCMC | 1 cut(s) | 561 |
| BseXI | GCAGC | 4 cut(s) | 155, 204, 430, 502 |
| BsgI | GTGCAG | 1 cut(s) | 162 |
| BshFI | GGCC | 1 cut(s) | 723 |
| BslFI | GGGAC | 1 cut(s) | 650 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 381, 554, 580, 674 |
| BsmAI | GTCTC | 1 cut(s) | 624 |
| BsmFI | GGGAC | 1 cut(s) | 650 |
| BsnI | GGCC | 1 cut(s) | 723 |
| Bsp1286I | GDGCHC | 3 cut(s) | 303, 561, 586 |
| Bsp143I | GATC | 3 cut(s) | 347, 423, 692 |
| BspACI | CCGC | 4 cut(s) | 119, 375, 518, 609 |
| BspANI | GGCC | 1 cut(s) | 723 |
| BspCNI | CTCAG | 3 cut(s) | 546, 793, 816 |
| BspHI | TCATGA | 1 cut(s) | 586 |
| BspLI | GGNNCC | 2 cut(s) | 300, 432 |
| BspPI | GGATC | 1 cut(s) | 355 |
| BsrDI | GCAATG | 2 cut(s) | 197, 710 |
| BsrI | ACTGG | 2 cut(s) | 349, 360 |
| BssMI | GATC | 3 cut(s) | 347, 423, 692 |
| BstDEI | CTNAG | 4 cut(s) | 533, 725, 780, 824 |
| BstEII | GGTNACC | 1 cut(s) | 677 |
| BstF5I | GGATG | 2 cut(s) | 53, 777 |
| BstKTI | GATC | 3 cut(s) | 350, 426, 695 |
| BstMAI | GTCTC | 1 cut(s) | 624 |
| BstMBI | GATC | 3 cut(s) | 347, 423, 692 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 452, 590 |
| BstNSI | RCATGY | 1 cut(s) | 224 |
| BstPI | GGTNACC | 1 cut(s) | 677 |
| BstSFI | CTRYAG | 2 cut(s) | 696, 816 |
| BstSLI | GKGCMC | 1 cut(s) | 561 |
| BstV1I | GCAGC | 4 cut(s) | 155, 204, 430, 502 |
| BstX2I | RGATCY | 3 cut(s) | 347, 423, 692 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 310 |
| BstYI | RGATCY | 3 cut(s) | 347, 423, 692 |
| BsuRI | GGCC | 1 cut(s) | 723 |
| BtsCI | GGATG | 2 cut(s) | 53, 777 |
| CaiI | CAGNNNCTG | 1 cut(s) | 344 |
| CciI | TCATGA | 1 cut(s) | 586 |
| Cfr13I | GGNCC | 1 cut(s) | 319 |
| Csp6I | GTAC | 1 cut(s) | 39 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 179, 214 |
| CviAII | CATG | 7 cut(s) | 138, 221, 524, 587, 638, 719, 740 |
| CviQI | GTAC | 1 cut(s) | 39 |
| DdeI | CTNAG | 4 cut(s) | 533, 725, 780, 824 |
| DpnI | GATC | 3 cut(s) | 349, 425, 694 |
| DpnII | GATC | 3 cut(s) | 347, 423, 692 |
| Eco24I | GRGCYC | 2 cut(s) | 303, 586 |
| Eco47I | GGWCC | 1 cut(s) | 319 |
| Eco91I | GGTNACC | 1 cut(s) | 677 |
| EcoO65I | GGTNACC | 1 cut(s) | 677 |
| EcoT38I | GRGCYC | 2 cut(s) | 303, 586 |
| FaeI | CATG | 7 cut(s) | 141, 224, 527, 590, 641, 722, 743 |
| FaqI | GGGAC | 1 cut(s) | 650 |
| FatI | CATG | 7 cut(s) | 137, 220, 523, 586, 637, 718, 739 |
| FauNDI | CATATG | 1 cut(s) | 329 |
| Fnu4HI | GCNGC | 5 cut(s) | 144, 218, 444, 516, 519 |
| FokI | GGATG | 2 cut(s) | 60, 784 |
| FriOI | GRGCYC | 2 cut(s) | 303, 586 |
| Fsp4HI | GCNGC | 5 cut(s) | 144, 218, 444, 516, 519 |
| FspBI | CTAG | 3 cut(s) | 36, 170, 180 |
| GluI | GCNGC | 5 cut(s) | 144, 218, 444, 516, 519 |
| HaeIII | GGCC | 1 cut(s) | 723 |
| Hin1II | CATG | 7 cut(s) | 141, 224, 527, 590, 641, 722, 743 |
| HindIII | AAGCTT | 1 cut(s) | 702 |
| HinfI | GANTC | 5 cut(s) | 166, 176, 209, 736, 746 |
| HphI | GGTGA | 2 cut(s) | 133, 364 |
| Hpy188I | TCNGA | 2 cut(s) | 352, 825 |
| Hpy188III | TCNNGA | 4 cut(s) | 170, 180, 587, 757 |
| HpyAV | CCTTC | 1 cut(s) | 760 |
| HpyCH4IV | ACGT | 1 cut(s) | 16 |
| HpyCH4V | TGCA | 6 cut(s) | 86, 143, 220, 274, 406, 593 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 452, 590 |
| HpyF3I | CTNAG | 4 cut(s) | 533, 725, 780, 824 |
| HpySE526I | ACGT | 1 cut(s) | 16 |
| Hsp92II | CATG | 7 cut(s) | 141, 224, 527, 590, 641, 722, 743 |
| Kzo9I | GATC | 3 cut(s) | 347, 423, 692 |
| LmnI | GCTCC | 3 cut(s) | 298, 430, 488 |
| LpnPI | CCDG | 7 cut(s) | 260, 281, 330, 341, 540, 599, 656 |
| Lsp1109I | GCAGC | 4 cut(s) | 155, 204, 430, 502 |
| LweI | GCATC | 2 cut(s) | 580, 762 |
| MaeI | CTAG | 3 cut(s) | 36, 170, 180 |
| MaeII | ACGT | 1 cut(s) | 16 |
| MaeIII | GTNAC | 1 cut(s) | 677 |
| MalI | GATC | 3 cut(s) | 349, 425, 694 |
| MboI | GATC | 3 cut(s) | 347, 423, 692 |
| MboII | GAAGA | 1 cut(s) | 175 |
| MflI | RGATCY | 3 cut(s) | 347, 423, 692 |
| MhlI | GDGCHC | 3 cut(s) | 303, 561, 586 |
| MluCI | AATT | 1 cut(s) | 96 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MmeI | TCCRAC | 1 cut(s) | 518 |
| MroXI | GAANNNNTTC | 1 cut(s) | 128 |
| MseI | TTAA | 5 cut(s) | 81, 99, 246, 564, 835 |
| MslI | CAYNNNNRTG | 3 cut(s) | 308, 411, 566 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 452, 590 |
| NdeI | CATATG | 1 cut(s) | 329 |
| NdeII | GATC | 3 cut(s) | 347, 423, 692 |
| NlaIII | CATG | 7 cut(s) | 141, 224, 527, 590, 641, 722, 743 |
| NlaIV | GGNNCC | 2 cut(s) | 300, 432 |
| NspI | RCATGY | 1 cut(s) | 224 |
| PagI | TCATGA | 1 cut(s) | 586 |
| PdmI | GAANNNNTTC | 1 cut(s) | 128 |
| PfeI | GAWTC | 4 cut(s) | 166, 176, 736, 746 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 674 |
| PkrI | GCNGC | 5 cut(s) | 145, 219, 445, 517, 520 |
| PleI | GAGTC | 1 cut(s) | 217 |
| PpsI | GAGTC | 1 cut(s) | 217 |
| PspEI | GGTNACC | 1 cut(s) | 677 |
| PspN4I | GGNNCC | 2 cut(s) | 300, 432 |
| PspPI | GGNCC | 1 cut(s) | 319 |
| PstNI | CAGNNNCTG | 1 cut(s) | 344 |
| PsuI | RGATCY | 3 cut(s) | 347, 423, 692 |
| RsaI | GTAC | 1 cut(s) | 40 |
| RsaNI | GTAC | 1 cut(s) | 39 |
| RseI | CAYNNNNRTG | 3 cut(s) | 308, 411, 566 |
| SaqAI | TTAA | 5 cut(s) | 81, 99, 246, 564, 835 |
| SatI | GCNGC | 5 cut(s) | 144, 218, 444, 516, 519 |
| Sau3AI | GATC | 3 cut(s) | 347, 423, 692 |
| Sau96I | GGNCC | 1 cut(s) | 319 |
| SchI | GAGTC | 1 cut(s) | 218 |
| SduI | GDGCHC | 3 cut(s) | 303, 561, 586 |
| SfaNI | GCATC | 2 cut(s) | 580, 762 |
| SfcI | CTRYAG | 2 cut(s) | 696, 816 |
| SinI | GGWCC | 1 cut(s) | 319 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 308, 411, 566 |
| Sse9I | AATT | 1 cut(s) | 96 |
| SsiI | CCGC | 4 cut(s) | 119, 375, 518, 609 |
| SspMI | CTAG | 3 cut(s) | 36, 170, 180 |
| TaiI | ACGT | 1 cut(s) | 19 |
| TaqI | TCGA | 4 cut(s) | 10, 448, 494, 576 |
| TasI | AATT | 1 cut(s) | 96 |
| TauI | GCSGC | 1 cut(s) | 521 |
| TfiI | GAWTC | 4 cut(s) | 166, 176, 736, 746 |
| Tru1I | TTAA | 5 cut(s) | 81, 99, 246, 564, 835 |
| Tru9I | TTAA | 5 cut(s) | 81, 99, 246, 564, 835 |
| TseI | GCWGC | 4 cut(s) | 143, 217, 443, 515 |
| TspDTI | ATGAA | 2 cut(s) | 584, 728 |
| TspGWI | ACGGA | 2 cut(s) | 60, 473 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 674 |
| VpaK11BI | GGWCC | 1 cut(s) | 319 |
| XbaI | TCTAGA | 2 cut(s) | 169, 179 |
| XceI | RCATGY | 1 cut(s) | 224 |
| XmnI | GAANNNNTTC | 1 cut(s) | 128 |
| XspI | CTAG | 3 cut(s) | 36, 170, 180 |