Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 450 |
| AcsI | RAATTY | 3 cut(s) | 10, 412, 463 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 48, 446 |
| AflIII | ACRYGT | 1 cut(s) | 187 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 398, 430 |
| AluBI | AGCT | 5 cut(s) | 124, 224, 317, 331, 359 |
| AluI | AGCT | 5 cut(s) | 124, 224, 317, 331, 359 |
| AoxI | GGCC | 1 cut(s) | 451 |
| ApeKI | GCWGC | 3 cut(s) | 314, 328, 344 |
| ApoI | RAATTY | 3 cut(s) | 10, 412, 463 |
| AsuHPI | GGTGA | 1 cut(s) | 290 |
| BauI | CACGAG | 1 cut(s) | 43 |
| BbvI | GCAGC | 3 cut(s) | 326, 340, 356 |
| BccI | CCATC | 2 cut(s) | 172, 464 |
| BfmI | CTRYAG | 1 cut(s) | 312 |
| BisI | GCNGC | 4 cut(s) | 315, 329, 345, 451 |
| BlsI | GCNGC | 4 cut(s) | 316, 330, 346, 452 |
| BmsI | GCATC | 2 cut(s) | 28, 331 |
| BpmI | CTGGAG | 1 cut(s) | 339 |
| BpuEI | CTTGAG | 1 cut(s) | 440 |
| BsaAI | YACGTR | 1 cut(s) | 137 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 48, 446 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 48, 446 |
| BseXI | GCAGC | 3 cut(s) | 326, 340, 356 |
| BseYI | CCCAGC | 1 cut(s) | 505 |
| BshFI | GGCC | 1 cut(s) | 453 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 48, 446 |
| BsnI | GGCC | 1 cut(s) | 453 |
| BspACI | CCGC | 1 cut(s) | 450 |
| BspANI | GGCC | 1 cut(s) | 453 |
| BspMAI | CTGCAG | 1 cut(s) | 316 |
| BssSI | CACGAG | 1 cut(s) | 43 |
| Bst2BI | CACGAG | 1 cut(s) | 43 |
| Bst4CI | ACNGT | 2 cut(s) | 67, 272 |
| Bst6I | CTCTTC | 1 cut(s) | 373 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 13, 350 |
| BstBAI | YACGTR | 1 cut(s) | 137 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 13, 350 |
| BstNSI | RCATGY | 1 cut(s) | 191 |
| BstSFI | CTRYAG | 1 cut(s) | 312 |
| BstV1I | GCAGC | 3 cut(s) | 326, 340, 356 |
| BsuRI | GGCC | 1 cut(s) | 453 |
| CseI | GACGC | 1 cut(s) | 410 |
| CviAII | CATG | 5 cut(s) | 83, 104, 188, 275, 425 |
| DraI | TTTAAA | 1 cut(s) | 291 |
| Eam1104I | CTCTTC | 1 cut(s) | 373 |
| EarI | CTCTTC | 1 cut(s) | 373 |
| FaeI | CATG | 5 cut(s) | 86, 107, 191, 278, 428 |
| FaiI | YATR | 8 cut(s) | 84, 105, 145, 154, 189, 276, 426, 499 |
| FatI | CATG | 5 cut(s) | 82, 103, 187, 274, 424 |
| Fnu4HI | GCNGC | 4 cut(s) | 315, 329, 345, 451 |
| Fsp4HI | GCNGC | 4 cut(s) | 315, 329, 345, 451 |
| GluI | GCNGC | 4 cut(s) | 315, 329, 345, 451 |
| GsaI | CCCAGC | 1 cut(s) | 509 |
| GsuI | CTGGAG | 1 cut(s) | 339 |
| HaeIII | GGCC | 1 cut(s) | 453 |
| HgaI | GACGC | 1 cut(s) | 410 |
| Hin1II | CATG | 5 cut(s) | 86, 107, 191, 278, 428 |
| HindIII | AAGCTT | 2 cut(s) | 122, 222 |
| HinfI | GANTC | 2 cut(s) | 71, 406 |
| HphI | GGTGA | 1 cut(s) | 290 |
| Hpy166II | GTNNAC | 1 cut(s) | 371 |
| Hpy188I | TCNGA | 2 cut(s) | 411, 521 |
| Hpy188III | TCNNGA | 3 cut(s) | 118, 430, 457 |
| Hpy8I | GTNNAC | 1 cut(s) | 371 |
| HpyAV | CCTTC | 1 cut(s) | 394 |
| HpyCH4III | ACNGT | 2 cut(s) | 67, 272 |
| HpyCH4IV | ACGT | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 7 cut(s) | 16, 62, 107, 185, 314, 344, 388 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 13, 350 |
| HpySE526I | ACGT | 1 cut(s) | 136 |
| Hsp92II | CATG | 5 cut(s) | 86, 107, 191, 278, 428 |
| LmnI | GCTCC | 1 cut(s) | 418 |
| LpnPI | CCDG | 5 cut(s) | 48, 103, 303, 415, 491 |
| Lsp1109I | GCAGC | 3 cut(s) | 326, 340, 356 |
| LweI | GCATC | 2 cut(s) | 28, 331 |
| MaeII | ACGT | 1 cut(s) | 136 |
| MaeIII | GTNAC | 1 cut(s) | 212 |
| MboII | GAAGA | 2 cut(s) | 33, 390 |
| MluCI | AATT | 7 cut(s) | 10, 78, 302, 335, 412, 442, 463 |
| MnlI | CCTC | 5 cut(s) | 52, 111, 133, 447, 464 |
| MseI | TTAA | 2 cut(s) | 290, 486 |
| MspA1I | CMGCKG | 1 cut(s) | 317 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 13, 350 |
| NlaIII | CATG | 5 cut(s) | 86, 107, 191, 278, 428 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| NspI | RCATGY | 1 cut(s) | 191 |
| PciI | ACATGT | 1 cut(s) | 187 |
| PfeI | GAWTC | 2 cut(s) | 71, 406 |
| PkrI | GCNGC | 4 cut(s) | 316, 330, 346, 452 |
| Ppu21I | YACGTR | 1 cut(s) | 137 |
| PscI | ACATGT | 1 cut(s) | 187 |
| PspFI | CCCAGC | 1 cut(s) | 505 |
| PstI | CTGCAG | 1 cut(s) | 316 |
| PvuII | CAGCTG | 1 cut(s) | 317 |
| SaqAI | TTAA | 2 cut(s) | 290, 486 |
| SatI | GCNGC | 4 cut(s) | 315, 329, 345, 451 |
| SfaNI | GCATC | 2 cut(s) | 28, 331 |
| SfcI | CTRYAG | 1 cut(s) | 312 |
| SmlI | CTYRAG | 1 cut(s) | 455 |
| SmoI | CTYRAG | 1 cut(s) | 455 |
| Sse9I | AATT | 7 cut(s) | 10, 78, 302, 335, 412, 442, 463 |
| SsiI | CCGC | 1 cut(s) | 450 |
| TaaI | ACNGT | 2 cut(s) | 67, 272 |
| TaiI | ACGT | 1 cut(s) | 139 |
| TasI | AATT | 7 cut(s) | 10, 78, 302, 335, 412, 442, 463 |
| TauI | GCSGC | 1 cut(s) | 453 |
| TfiI | GAWTC | 2 cut(s) | 71, 406 |
| Tru1I | TTAA | 2 cut(s) | 290, 486 |
| Tru9I | TTAA | 2 cut(s) | 290, 486 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 3 cut(s) | 314, 328, 344 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspDTI | ATGAA | 2 cut(s) | 71, 476 |
| XapI | RAATTY | 3 cut(s) | 10, 412, 463 |
| XceI | RCATGY | 1 cut(s) | 191 |