Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 157 |
| AccI | GTMKAC | 1 cut(s) | 496 |
| AciI | CCGC | 1 cut(s) | 57 |
| AclWI | GGATC | 3 cut(s) | 612, 681, 761 |
| AcsI | RAATTY | 1 cut(s) | 147 |
| AfaI | GTAC | 2 cut(s) | 537, 726 |
| AgsI | TTSAA | 7 cut(s) | 17, 99, 116, 153, 764, 779, 812 |
| AjnI | CCWGG | 1 cut(s) | 7 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 701, 733 |
| AluBI | AGCT | 5 cut(s) | 86, 458, 466, 563, 735 |
| AluI | AGCT | 5 cut(s) | 86, 458, 466, 563, 735 |
| AlwI | GGATC | 3 cut(s) | 612, 681, 761 |
| ApoI | RAATTY | 1 cut(s) | 147 |
| AspS9I | GGNCC | 1 cut(s) | 316 |
| AsuC2I | CCSGG | 1 cut(s) | 162 |
| AsuHPI | GGTGA | 1 cut(s) | 238 |
| AvaII | GGWCC | 1 cut(s) | 316 |
| BanI | GGYRCC | 1 cut(s) | 157 |
| BauI | CACGAG | 1 cut(s) | 566 |
| BciT130I | CCWGG | 1 cut(s) | 9 |
| BcnI | CCSGG | 1 cut(s) | 162 |
| BfaI | CTAG | 6 cut(s) | 170, 206, 401, 728, 750, 898 |
| BfmI | CTRYAG | 1 cut(s) | 874 |
| Bme1390I | CCNGG | 2 cut(s) | 9, 162 |
| Bme18I | GGWCC | 1 cut(s) | 316 |
| BmgT120I | GGNCC | 1 cut(s) | 316 |
| BmiI | GGNNCC | 2 cut(s) | 159, 885 |
| BmrFI | CCNGG | 2 cut(s) | 9, 162 |
| BmsI | GCATC | 2 cut(s) | 562, 819 |
| BpmI | CTGGAG | 1 cut(s) | 357 |
| BpuEI | CTTGAG | 1 cut(s) | 531 |
| BpuMI | CCSGG | 1 cut(s) | 162 |
| BsaBI | GATNNNNATC | 1 cut(s) | 306 |
| BsaJI | CCNNGG | 1 cut(s) | 72 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 156, 186 |
| Bse1I | ACTGG | 3 cut(s) | 318, 319, 525 |
| Bse8I | GATNNNNATC | 1 cut(s) | 306 |
| BseBI | CCWGG | 1 cut(s) | 9 |
| BseDI | CCNNGG | 1 cut(s) | 72 |
| BseGI | GGATG | 3 cut(s) | 553, 834, 862 |
| BseJI | GATNNNNATC | 1 cut(s) | 306 |
| BseMII | CTCAG | 2 cut(s) | 189, 260 |
| BseNI | ACTGG | 3 cut(s) | 318, 319, 525 |
| BshNI | GGYRCC | 1 cut(s) | 157 |
| BsiSI | CCGG | 1 cut(s) | 161 |
| Bsp143I | GATC | 3 cut(s) | 604, 673, 766 |
| BspACI | CCGC | 1 cut(s) | 57 |
| BspCNI | CTCAG | 2 cut(s) | 190, 261 |
| BspLI | GGNNCC | 2 cut(s) | 159, 885 |
| BspPI | GGATC | 3 cut(s) | 612, 681, 761 |
| BspQI | GCTCTTC | 1 cut(s) | 855 |
| BspT107I | GGYRCC | 1 cut(s) | 157 |
| BsrI | ACTGG | 3 cut(s) | 318, 319, 525 |
| BssECI | CCNNGG | 1 cut(s) | 72 |
| BssMI | GATC | 3 cut(s) | 604, 673, 766 |
| BssSI | CACGAG | 1 cut(s) | 566 |
| Bst2BI | CACGAG | 1 cut(s) | 566 |
| Bst2UI | CCWGG | 1 cut(s) | 9 |
| Bst4CI | ACNGT | 5 cut(s) | 76, 139, 190, 619, 715 |
| Bst6I | CTCTTC | 1 cut(s) | 855 |
| BstDEI | CTNAG | 2 cut(s) | 198, 269 |
| BstDSI | CCRYGG | 1 cut(s) | 72 |
| BstF5I | GGATG | 3 cut(s) | 553, 834, 862 |
| BstKTI | GATC | 3 cut(s) | 607, 676, 769 |
| BstMBI | GATC | 3 cut(s) | 604, 673, 766 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 63, 530 |
| BstNI | CCWGG | 1 cut(s) | 9 |
| BstSCI | CCNGG | 2 cut(s) | 7, 160 |
| BstSFI | CTRYAG | 1 cut(s) | 874 |
| BstX2I | RGATCY | 2 cut(s) | 673, 766 |
| BstYI | RGATCY | 2 cut(s) | 673, 766 |
| BtgI | CCRYGG | 1 cut(s) | 72 |
| BtsCI | GGATG | 3 cut(s) | 553, 834, 862 |
| BtsIMutI | CAGTG | 1 cut(s) | 633 |
| Cfr13I | GGNCC | 1 cut(s) | 316 |
| Csp6I | GTAC | 2 cut(s) | 536, 725 |
| CviAII | CATG | 1 cut(s) | 34 |
| CviQI | GTAC | 2 cut(s) | 536, 725 |
| DdeI | CTNAG | 2 cut(s) | 198, 269 |
| DpnI | GATC | 3 cut(s) | 606, 675, 768 |
| DpnII | GATC | 3 cut(s) | 604, 673, 766 |
| DraI | TTTAAA | 1 cut(s) | 804 |
| Eam1104I | CTCTTC | 1 cut(s) | 855 |
| EarI | CTCTTC | 1 cut(s) | 855 |
| EciI | GGCGGA | 1 cut(s) | 72 |
| Eco47I | GGWCC | 1 cut(s) | 316 |
| EcoRII | CCWGG | 1 cut(s) | 7 |
| FaeI | CATG | 1 cut(s) | 37 |
| FatI | CATG | 1 cut(s) | 33 |
| FblI | GTMKAC | 1 cut(s) | 496 |
| FokI | GGATG | 3 cut(s) | 540, 841, 869 |
| FspBI | CTAG | 6 cut(s) | 170, 206, 401, 728, 750, 898 |
| GsuI | CTGGAG | 1 cut(s) | 357 |
| HapII | CCGG | 1 cut(s) | 161 |
| Hin1II | CATG | 1 cut(s) | 37 |
| HincII | GTYRAC | 2 cut(s) | 238, 418 |
| HindII | GTYRAC | 2 cut(s) | 238, 418 |
| HindIII | AAGCTT | 1 cut(s) | 456 |
| HinfI | GANTC | 3 cut(s) | 4, 202, 246 |
| HpaII | CCGG | 1 cut(s) | 161 |
| HphI | GGTGA | 1 cut(s) | 238 |
| Hpy166II | GTNNAC | 7 cut(s) | 238, 418, 497, 538, 581, 596, 725 |
| Hpy188I | TCNGA | 6 cut(s) | 199, 346, 356, 508, 678, 771 |
| Hpy188III | TCNNGA | 2 cut(s) | 296, 384 |
| Hpy8I | GTNNAC | 7 cut(s) | 238, 418, 497, 538, 581, 596, 725 |
| HpyAV | CCTTC | 2 cut(s) | 110, 258 |
| HpyCH4III | ACNGT | 5 cut(s) | 76, 139, 190, 619, 715 |
| HpyCH4V | TGCA | 2 cut(s) | 695, 790 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 63, 530 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 269 |
| Hsp92II | CATG | 1 cut(s) | 37 |
| Kzo9I | GATC | 3 cut(s) | 604, 673, 766 |
| LguI | GCTCTTC | 1 cut(s) | 855 |
| LpnPI | CCDG | 8 cut(s) | 21, 174, 299, 321, 332, 506, 810, 846 |
| LweI | GCATC | 2 cut(s) | 562, 819 |
| MaeI | CTAG | 6 cut(s) | 170, 206, 401, 728, 750, 898 |
| MaeIII | GTNAC | 1 cut(s) | 226 |
| MalI | GATC | 3 cut(s) | 606, 675, 768 |
| MboI | GATC | 3 cut(s) | 604, 673, 766 |
| MboII | GAAGA | 7 cut(s) | 29, 673, 713, 776, 791, 824, 872 |
| MflI | RGATCY | 2 cut(s) | 673, 766 |
| MluCI | AATT | 5 cut(s) | 94, 147, 291, 328, 369 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 2 cut(s) | 121, 199 |
| MnlI | CCTC | 8 cut(s) | 158, 217, 332, 430, 493, 508, 664, 876 |
| MseI | TTAA | 4 cut(s) | 306, 323, 443, 803 |
| MslI | CAYNNNNRTG | 1 cut(s) | 827 |
| MspI | CCGG | 1 cut(s) | 161 |
| MspR9I | CCNGG | 2 cut(s) | 9, 162 |
| MvaI | CCWGG | 1 cut(s) | 9 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 63, 530 |
| NciI | CCSGG | 1 cut(s) | 162 |
| NdeII | GATC | 3 cut(s) | 604, 673, 766 |
| NlaIII | CATG | 1 cut(s) | 37 |
| NlaIV | GGNNCC | 2 cut(s) | 159, 885 |
| NmuCI | GTSAC | 1 cut(s) | 226 |
| PciSI | GCTCTTC | 1 cut(s) | 855 |
| PfeI | GAWTC | 2 cut(s) | 202, 246 |
| PfoI | TCCNGGA | 1 cut(s) | 7 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp6I | CCWGG | 1 cut(s) | 7 |
| PspGI | CCWGG | 1 cut(s) | 7 |
| PspN4I | GGNNCC | 2 cut(s) | 159, 885 |
| PspPI | GGNCC | 1 cut(s) | 316 |
| PsuI | RGATCY | 2 cut(s) | 673, 766 |
| RsaI | GTAC | 2 cut(s) | 537, 726 |
| RsaNI | GTAC | 2 cut(s) | 536, 725 |
| RseI | CAYNNNNRTG | 1 cut(s) | 827 |
| SapI | GCTCTTC | 1 cut(s) | 855 |
| SaqAI | TTAA | 4 cut(s) | 306, 323, 443, 803 |
| Sau3AI | GATC | 3 cut(s) | 604, 673, 766 |
| Sau96I | GGNCC | 1 cut(s) | 316 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 2 cut(s) | 9, 162 |
| SetI | ASST | 8 cut(s) | 88, 121, 169, 228, 460, 468, 565, 737 |
| SfaNI | GCATC | 2 cut(s) | 562, 819 |
| SfcI | CTRYAG | 1 cut(s) | 874 |
| SinI | GGWCC | 1 cut(s) | 316 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 827 |
| SmlI | CTYRAG | 1 cut(s) | 546 |
| SmoI | CTYRAG | 1 cut(s) | 546 |
| Sse9I | AATT | 5 cut(s) | 94, 147, 291, 328, 369 |
| SsiI | CCGC | 1 cut(s) | 57 |
| SspI | AATATT | 1 cut(s) | 808 |
| SspMI | CTAG | 6 cut(s) | 170, 206, 401, 728, 750, 898 |
| StyD4I | CCNGG | 2 cut(s) | 7, 160 |
| TaaI | ACNGT | 5 cut(s) | 76, 139, 190, 619, 715 |
| TaqI | TCGA | 2 cut(s) | 297, 435 |
| TaqII | GACCGA | 1 cut(s) | 435 |
| TasI | AATT | 5 cut(s) | 94, 147, 291, 328, 369 |
| TatI | WGTACW | 2 cut(s) | 535, 724 |
| TfiI | GAWTC | 2 cut(s) | 202, 246 |
| Tru1I | TTAA | 4 cut(s) | 306, 323, 443, 803 |
| Tru9I | TTAA | 4 cut(s) | 306, 323, 443, 803 |
| TscAI | CASTG | 1 cut(s) | 633 |
| TseFI | GTSAC | 1 cut(s) | 226 |
| Tsp45I | GTSAC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 5 cut(s) | 444, 468, 492, 857, 873 |
| TspRI | CASTG | 1 cut(s) | 633 |
| VpaK11BI | GGWCC | 1 cut(s) | 316 |
| XapI | RAATTY | 1 cut(s) | 147 |
| XmiI | GTMKAC | 1 cut(s) | 496 |
| XspI | CTAG | 6 cut(s) | 170, 206, 401, 728, 750, 898 |