Rmu_sc0001018.1_g000024

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001018.1
OG0000072
Physical Location & Seq
Forward (+)
104463 .. 106734
2272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001018.1_g000024.1.cds

Sequence Viewer

Length: 1176 bp
atggaggcaataaaaggggtatccactggcgtcagtgggatcagctatgtaaaaacaagcaggacggtgggtgataaatggctgccttctccctggactttcaaagttgcaacaccaagattcatggaggtagaggcgaaagtgagtcaactaatgacaagcccaggtacatggaatttagcttttatctatgataatttccttcctatggatgttgagaaaatattatcgattcctctatgtgagaagagtattggggatgttgtgatttggcactatagtaaaaatgggcactattcagtgaaattcggttactggttagggatggagttgaagcagtttgacatgggtaggtgcagtagcgggggaaaaggtgaaactaactccactaatgtttggagtacattgtggagtctttggattccgaacaaagtcaagatcttcttatggaaagcttgctactcttttctcccttgtgctgagtgtttgttcaaacgcagaattgggaataatgccaattgcttccggtgtggtggagtagaggagtcgattttgcacttagcgggggaaaaggtgaaactaactccactaatgtttggagtacattgtggagtctttggattccgaacaaagtcaagatcttcttatggaaagcttgctactcttttctcccttgtgctgagtgagtgtccaagggtacgtaaagtctggaaaggtatctggttaagagggatgctgaagacatggtgtggtcctagttttactgatatgttggtttgggtgataagggggggctgtcctagtgaaattgagcagttttgtcttgtcagttggtggctttggaaggatagagataatgagaggcatgggaaggagaaaggaagctctgggttgggaactgtaattttagatgcaactgggaagttgataggggcagctgctgtaccaattattggctcactcaaagcgggggcagctgaagcgatgacactttggaaaggtctttcgtactgcaaacaactaggactagaccatatcttgatatatggcgacactctcaacgtcatcaaagctttggatgacactggcttggatctaagtgcatatggtggaattcttgatgctgtacgatcgttgttgaaggagtttgtccttatttcgtggaaacatgtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

391

Amino Acids

43.58

Weight (kDa)

9.16

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 953
AciI CCGC 3 cut(s) 363, 563, 968
AclWI GGATC 2 cut(s) 47, 1101
AcsI RAATTY 3 cut(s) 175, 305, 1113
AcuI CTGAAG 2 cut(s) 758, 999
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 7 cut(s) 169, 403, 603, 699, 945, 1010, 1128
AfiI CCNNNNNNNGG 2 cut(s) 208, 953
AflIII ACRYGT 1 cut(s) 1168
AgsI TTSAA 4 cut(s) 103, 334, 493, 1141
AjnI CCWGG 2 cut(s) 92, 163
AluBI AGCT 8 cut(s) 45, 182, 455, 655, 885, 938, 977, 1073
AluI AGCT 8 cut(s) 45, 182, 455, 655, 885, 938, 977, 1073
AlwI GGATC 2 cut(s) 47, 1101
AlwNI CAGNNNCTG 1 cut(s) 941
ApeKI GCWGC 4 cut(s) 82, 935, 938, 974
ApoI RAATTY 3 cut(s) 175, 305, 1113
AspS9I GGNCC 1 cut(s) 752
AsuHPI GGTGA 4 cut(s) 83, 386, 586, 793
AvaII GGWCC 1 cut(s) 752
BaeGI GKGCMC 1 cut(s) 294
BbsI GAAGAC 1 cut(s) 746
BbvI GCAGC 4 cut(s) 69, 925, 947, 986
BccI CCATC 1 cut(s) 319
BciT130I CCWGG 2 cut(s) 94, 165
BciVI GTATCC 1 cut(s) 31
BfaI CTAG 4 cut(s) 756, 801, 1022, 1028
BfmI CTRYAG 1 cut(s) 277
BfuI GTATCC 1 cut(s) 31
BglII AGATCT 2 cut(s) 438, 638
BisI GCNGC 4 cut(s) 83, 936, 939, 975
BlsI GCNGC 4 cut(s) 84, 937, 940, 976
Bme1390I CCNGG 2 cut(s) 94, 165
Bme18I GGWCC 1 cut(s) 752
BmgT120I GGNCC 1 cut(s) 752
BmrFI CCNGG 2 cut(s) 94, 165
BmrI ACTGGG 1 cut(s) 927
BmsI GCATC 3 cut(s) 723, 901, 1111
BmuI ACTGGG 1 cut(s) 927
BpiI GAAGAC 1 cut(s) 746
Bsa29I ATCGAT 1 cut(s) 230
BsaAI YACGTR 1 cut(s) 701
BsaHI GRCGYC 1 cut(s) 30
BsaJI CCNNGG 3 cut(s) 92, 163, 692
BsaWI WCCGGW 1 cut(s) 525
Bsc4I CCNNNNNNNGG 2 cut(s) 208, 953
Bse1I ACTGG 4 cut(s) 31, 320, 922, 1090
BseBI CCWGG 2 cut(s) 94, 165
BseCI ATCGAT 1 cut(s) 230
BseDI CCNNGG 3 cut(s) 92, 163, 692
BseGI GGATG 5 cut(s) 217, 265, 330, 738, 1084
BseLI CCNNNNNNNGG 2 cut(s) 208, 953
BseMII CTCAG 2 cut(s) 471, 671
BseNI ACTGG 4 cut(s) 31, 320, 922, 1090
BseRI GAGGAG 1 cut(s) 557
BseSI GKGCMC 1 cut(s) 294
BseXI GCAGC 4 cut(s) 69, 925, 947, 986
BsgI GTGCAG 1 cut(s) 376
Bsh1285I CGRYCG 1 cut(s) 1133
BshVI ATCGAT 1 cut(s) 230
BsiEI CGRYCG 1 cut(s) 1133
BsiSI CCGG 1 cut(s) 526
BslI CCNNNNNNNGG 2 cut(s) 208, 953
Bsp1286I GDGCHC 1 cut(s) 294
Bsp143I GATC 5 cut(s) 39, 438, 638, 1093, 1130
BspACI CCGC 3 cut(s) 363, 563, 968
BspCNI CTCAG 2 cut(s) 472, 672
BspDI ATCGAT 1 cut(s) 230
BspPI GGATC 2 cut(s) 47, 1101
BsrI ACTGG 4 cut(s) 31, 320, 922, 1090
BssECI CCNNGG 3 cut(s) 92, 163, 692
BssMI GATC 5 cut(s) 39, 438, 638, 1093, 1130
BssNI GRCGYC 1 cut(s) 30
BssT1I CCWWGG 1 cut(s) 692
Bst2UI CCWGG 2 cut(s) 94, 165
Bst4CI ACNGT 2 cut(s) 67, 901
Bst6I CTCTTC 1 cut(s) 242
BstACI GRCGYC 1 cut(s) 30
BstBAI YACGTR 1 cut(s) 701
BstC8I GCNNGC 2 cut(s) 457, 657
BstDEI CTNAG 4 cut(s) 480, 559, 680, 1097
BstF5I GGATG 5 cut(s) 217, 265, 330, 738, 1084
BstKTI GATC 5 cut(s) 42, 441, 641, 1096, 1133
BstMBI GATC 5 cut(s) 39, 438, 638, 1093, 1130
BstMCI CGRYCG 1 cut(s) 1133
BstMWI GCNNNNNNNGC 2 cut(s) 974, 980
BstNI CCWGG 2 cut(s) 94, 165
BstNSI RCATGY 1 cut(s) 1172
BstSCI CCNGG 2 cut(s) 92, 163
BstSFI CTRYAG 1 cut(s) 277
BstSLI GKGCMC 1 cut(s) 294
BstSNI TACGTA 1 cut(s) 701
BstV1I GCAGC 4 cut(s) 69, 925, 947, 986
BstV2I GAAGAC 1 cut(s) 746
BstX2I RGATCY 3 cut(s) 438, 638, 1093
BstXI CCANNNNNNTGG 1 cut(s) 171
BstYI RGATCY 3 cut(s) 438, 638, 1093
Bsu15I ATCGAT 1 cut(s) 230
BsuI GTATCC 1 cut(s) 31
BsuTUI ATCGAT 1 cut(s) 230
BtgZI GCGATG 1 cut(s) 998
BtsCI GGATG 5 cut(s) 217, 265, 330, 738, 1084
BtsIMutI CAGTG 4 cut(s) 24, 40, 306, 1083
Cac8I GCNNGC 2 cut(s) 457, 657
CaiI CAGNNNCTG 1 cut(s) 941
Cfr13I GGNCC 1 cut(s) 752
ClaI ATCGAT 1 cut(s) 230
CseI GACGC 1 cut(s) 19
Csp6I GTAC 7 cut(s) 168, 402, 602, 698, 944, 1009, 1127
CviAII CATG 6 cut(s) 124, 171, 346, 744, 866, 1169
CviQI GTAC 7 cut(s) 168, 402, 602, 698, 944, 1009, 1127
DdeI CTNAG 4 cut(s) 480, 559, 680, 1097
DpnI GATC 5 cut(s) 41, 440, 640, 1095, 1132
DpnII GATC 5 cut(s) 39, 438, 638, 1093, 1130
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
Eco105I TACGTA 1 cut(s) 701
Eco130I CCWWGG 1 cut(s) 692
Eco47I GGWCC 1 cut(s) 752
Eco57I CTGAAG 2 cut(s) 758, 999
EcoRI GAATTC 1 cut(s) 1113
EcoRII CCWGG 2 cut(s) 92, 163
EcoT14I CCWWGG 1 cut(s) 692
ErhI CCWWGG 1 cut(s) 692
FaeI CATG 6 cut(s) 127, 174, 349, 747, 869, 1172
FalI AAGNNNNNCTT 4 cut(s) 428, 460, 628, 660
FatI CATG 6 cut(s) 123, 170, 345, 743, 865, 1168
FauI CCCGC 3 cut(s) 356, 556, 961
FauNDI CATATG 1 cut(s) 1105
Fnu4HI GCNGC 4 cut(s) 83, 936, 939, 975
FokI GGATG 5 cut(s) 224, 272, 337, 745, 1091
Fsp4HI GCNGC 4 cut(s) 83, 936, 939, 975
FspBI CTAG 4 cut(s) 756, 801, 1022, 1028
GluI GCNGC 4 cut(s) 83, 936, 939, 975
HapII CCGG 1 cut(s) 526
HgaI GACGC 1 cut(s) 19
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 6 cut(s) 127, 174, 349, 747, 869, 1172
HincII GTYRAC 1 cut(s) 149
HindII GTYRAC 1 cut(s) 149
HindIII AAGCTT 3 cut(s) 453, 653, 1071
HinfI GANTC 8 cut(s) 120, 145, 232, 412, 421, 545, 612, 621
HpaII CCGG 1 cut(s) 526
HphI GGTGA 4 cut(s) 83, 386, 586, 793
Hpy166II GTNNAC 1 cut(s) 149
Hpy188I TCNGA 2 cut(s) 426, 626
Hpy188III TCNNGA 5 cut(s) 436, 636, 709, 1039, 1118
Hpy8I GTNNAC 1 cut(s) 149
HpyAV CCTTC 5 cut(s) 96, 212, 838, 865, 1135
HpyCH4III ACNGT 2 cut(s) 67, 901
HpyCH4IV ACGT 2 cut(s) 700, 1062
HpyCH4V TGCA 6 cut(s) 110, 357, 556, 914, 1014, 1103
HpyF10VI GCNNNNNNNGC 2 cut(s) 974, 980
HpyF3I CTNAG 4 cut(s) 480, 559, 680, 1097
HpySE526I ACGT 2 cut(s) 700, 1062
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 6 cut(s) 127, 174, 349, 747, 869, 1172
Kzo9I GATC 5 cut(s) 39, 438, 638, 1093, 1130
Lsp1109I GCAGC 4 cut(s) 69, 925, 947, 986
LweI GCATC 3 cut(s) 723, 901, 1111
MaeI CTAG 4 cut(s) 756, 801, 1022, 1028
MaeII ACGT 2 cut(s) 700, 1062
MaeIII GTNAC 1 cut(s) 311
MalI GATC 5 cut(s) 41, 440, 640, 1095, 1132
MboI GATC 5 cut(s) 39, 438, 638, 1093, 1130
MboII GAAGA 4 cut(s) 259, 433, 633, 751
MfeI CAATTG 1 cut(s) 517
MflI RGATCY 3 cut(s) 438, 638, 1093
MhlI GDGCHC 1 cut(s) 294
MluCI AATT 9 cut(s) 175, 196, 305, 501, 517, 807, 903, 948, 1113
MlyI GAGTC 4 cut(s) 154, 421, 554, 621
MnlI CCTC 6 cut(s) 121, 127, 246, 535, 722, 855
MseI TTAA 1 cut(s) 725
MspA1I CMGCKG 2 cut(s) 938, 977
MspI CCGG 1 cut(s) 526
MspR9I CCNGG 2 cut(s) 94, 165
MunI CAATTG 1 cut(s) 517
MvaI CCWGG 2 cut(s) 94, 165
MwoI GCNNNNNNNGC 2 cut(s) 974, 980
NdeI CATATG 1 cut(s) 1105
NdeII GATC 5 cut(s) 39, 438, 638, 1093, 1130
NlaIII CATG 6 cut(s) 127, 174, 349, 747, 869, 1172
NspI RCATGY 1 cut(s) 1172
PciI ACATGT 1 cut(s) 1168
PfeI GAWTC 4 cut(s) 120, 232, 421, 621
PflMI CCANNNNNTGG 1 cut(s) 953
PkrI GCNGC 4 cut(s) 84, 937, 940, 976
Ple19I CGATCG 1 cut(s) 1133
PleI GAGTC 4 cut(s) 153, 420, 553, 620
PpsI GAGTC 4 cut(s) 153, 420, 553, 620
Ppu21I YACGTR 1 cut(s) 701
PscI ACATGT 1 cut(s) 1168
Psp6I CCWGG 2 cut(s) 92, 163
PspGI CCWGG 2 cut(s) 92, 163
PspPI GGNCC 1 cut(s) 752
PstNI CAGNNNCTG 1 cut(s) 941
PsuI RGATCY 3 cut(s) 438, 638, 1093
PvuI CGATCG 1 cut(s) 1133
PvuII CAGCTG 2 cut(s) 938, 977
RsaI GTAC 7 cut(s) 169, 403, 603, 699, 945, 1010, 1128
RsaNI GTAC 7 cut(s) 168, 402, 602, 698, 944, 1009, 1127
SaqAI TTAA 1 cut(s) 725
SatI GCNGC 4 cut(s) 83, 936, 939, 975
Sau3AI GATC 5 cut(s) 39, 438, 638, 1093, 1130
Sau96I GGNCC 1 cut(s) 752
SchI GAGTC 4 cut(s) 154, 421, 554, 621
ScrFI CCNGG 2 cut(s) 94, 165
SduI GDGCHC 1 cut(s) 294
SfaNI GCATC 3 cut(s) 723, 901, 1111
SfcI CTRYAG 1 cut(s) 277
SinI GGWCC 1 cut(s) 752
SnaBI TACGTA 1 cut(s) 701
Sse9I AATT 9 cut(s) 175, 196, 305, 501, 517, 807, 903, 948, 1113
SsiI CCGC 3 cut(s) 363, 563, 968
SspI AATATT 1 cut(s) 225
SspMI CTAG 4 cut(s) 756, 801, 1022, 1028
StyD4I CCNGG 2 cut(s) 92, 163
StyI CCWWGG 1 cut(s) 692
TaaI ACNGT 2 cut(s) 67, 901
TaiI ACGT 2 cut(s) 703, 1065
TaqI TCGA 2 cut(s) 230, 548
TasI AATT 9 cut(s) 175, 196, 305, 501, 517, 807, 903, 948, 1113
TatI WGTACW 2 cut(s) 401, 601
TfiI GAWTC 4 cut(s) 120, 232, 421, 621
Tru1I TTAA 1 cut(s) 725
Tru9I TTAA 1 cut(s) 725
TscAI CASTG 4 cut(s) 31, 40, 306, 1090
TseI GCWGC 4 cut(s) 82, 935, 938, 974
TspDTI ATGAA 1 cut(s) 112
TspRI CASTG 4 cut(s) 31, 40, 306, 1090
Van91I CCANNNNNTGG 1 cut(s) 953
VpaK11BI GGWCC 1 cut(s) 752
XapI RAATTY 3 cut(s) 175, 305, 1113
XceI RCATGY 1 cut(s) 1172
XspI CTAG 4 cut(s) 756, 801, 1022, 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.