Rorug04G0129600

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000072
Physical Location & Seq
Reverse (-)
20707919 .. 20710520
2602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0129600.1

Sequence Viewer

Length: 1437 bp
ATGGTGGGGGCTCTGCTTGAAATCAAAGAAGCAGGCTTTTCTGCTCCACCACCTCCAATTTCCAATCTTGAATCAGATAGTTTCAGTTTTGGGAGCAAGGTCAGTCCAAGCATATTGCTCATAATCATAATCCTAGCCATTATTTTCTTTGTTTCTGGTTTCCTTCACCTGCTTGTTAGATTCCTTTTAAGACCTCCAAGCAGAGACACAGATGACTTGGAGAGTGTGACTGTTCTTCAAGGCCAGTTACAGCAACTGTTCCATCTCCATGATGCTGGAGTTGACCAGTCCTTCATAGACACCCTTCCTGTCTTTAATTACAAAGCCATTATTGGATTGAAAAATCCATTTGATTGTGCTGTTTGTCTATGTGAGTTTGAGCCTGAAGACAAGCTTAGATTGTTGCCAAAATGTAGCCATGCATTTCATATGGAGTGTATAGACACTTGGCTCTTGTCTCACTCCACCTGCCCTTTGTGTAGATCCACTTTGCTTCCTGAAAACTCTCAAAGCCATACTTGTTCTCCCATTGTTCTTGTTCTTGAATCGGGAAGTGTCGAAAACTCGAGAGAGATCAATGTTTCTGGTAGAGACCATCTGGCTGCTGTTGGCAGAACCGGTTCTGTTTTGGGTCCCAATTCCCATCTGGGTTTGCACGGAGACATGGAATTGGGCTTGTCTCAACATAAATCTTGTGAAATTGTGACGAAAGATGAAGGGAATCCGAATCCGGCAGTTGCAGTGGATCAAGAGGAAAAGGTTGTGCAAGTGAAGCTTGGCAAGTTTAGGAATGTAGATGGTGGTGAAGGGAGTAGTAATAGACATGTGGATGCAAGAAGGTGTTTTTCAATGGGGTCTTTTGCTTATGTAATGGATGAGAGTTCTTCATTGCAAGTACCCATTAGAAGCTCGACGAAAAAGCAATCTAGTAAGAAGCCAAGTTTGCCTTTAGAACCGGGCCATAGGCAAGCTATGTCTGAATGCGATTGCGAGTCCAGAAGAGAGTTCAAGTTCAATGGGGCCGAAGCAATTGGAAGCCTTGAAACTCAAGGGACTAATAGTGCTAGCATTACTAGTGGCAATGGCATTGGGAGGAGCAAGAGGGAGAGCTTCTCTATATCAAAGATTTGGCTCAGGGGGAAGAAAGAAAAGCCGAATGTGGTTGCCGCTGATCTGTCTAGGCGGGCCTTTTCGTTCCGGTTTCCAGGGCACCGGGCAGGCGCAGATGAAAGCAAGGCCAAGAACGGTGGTGGGAGTAGGAGGACTATTTCCGAGATTGACATTGGAAGGTGGGAAAATGGAGGGAGTGAGGTGAATTTCAGCGGCAACAGTTTGGATTCTCAATCAAATCCACCCTCTTTTGCAAGAAGGACTCTGCTTTGGCTTATGGGAAGACAGAACAAAGTTGTTCATTCATCTTTAGATCCCACTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

478

Amino Acids

52.17

Weight (kDa)

6.94

Isoelectric Point (pI)

52.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 114 - 161 8.2e-10 RING-H2 zinc finger domain
zf-ANAPC11 PF12861 116 - 164 2.4e-06 Anaphase-promoting complex subunit 11 RING-H2 finger
zf-RING_2 PF13639 118 - 161 4.1e-14 Ring finger domain
zf-RING_11 PF17123 118 - 147 2.9e-10 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38920
fragaria_vesca FvH4_1g15990 FvH4_1g20960 FvH4_1g24221 FvH4_1g24420 FvH4_2g01203 FvH4_2g08721 FvH4_2g09751 FvH4_2g13111 FvH4_2g14361 FvH4_2g19531 FvH4_2g20801 FvH4_2g36230 FvH4_3g07262 FvH4_3g14231 FvH4_3g21341 FvH4_3g23591 FvH4_3g27972 FvH4_3g28692 FvH4_4g05541 FvH4_4g07351 FvH4_4g07410 FvH4_4g13062 FvH4_4g15487 FvH4_4g15790 FvH4_4g17671 FvH4_4g26583 FvH4_4g28900 FvH4_4g31671 FvH4_5g25821 FvH4_5g31851 FvH4_5g38981 FvH4_6g29902 FvH4_7g03001 FvH4_7g10254
malus_domestica MD03G1147200.v1.1 MD15G1309200.v1.1 MD17G1150900.v1.1
prunus_persica Prupe.1G205500_v2.0.a1 Prupe.2G069500_v2.0.a1 Prupe.2G082600_v2.0.a1 Prupe.3G063400_v2.0.a1 Prupe.3G126800_v2.0.a1 Prupe.3G133900_v2.0.a1 Prupe.3G283300_v2.0.a1 Prupe.4G143500_v2.0.a1 Prupe.4G186900_v2.0.a1 Prupe.6G204400_v2.0.a1 Prupe.6G272800_v2.0.a1 Prupe.7G035500_v2.0.a1 Prupe.7G038400_v2.0.a1 Prupe.7G049300_v2.0.a1 Prupe.7G076800_v2.0.a1 Prupe.8G099500_v2.0.a1 Prupe.8G101300_v2.0.a1
pyrus_communis pycom03g10120 pycom04g16660 pycom08g19920 pycom11g21950 pycom14g01510 pycom14g06470
rosa_chinensis RchiOBHm_Chr1g0323941 RchiOBHm_Chr1g0325331 RchiOBHm_Chr1g0339311 RchiOBHm_Chr1g0345991 RchiOBHm_Chr1g0354891 RchiOBHm_Chr2g0118041 RchiOBHm_Chr3g0468731 RchiOBHm_Chr3g0488841 RchiOBHm_Chr4g0388981 RchiOBHm_Chr4g0398671 RchiOBHm_Chr4g0400431 RchiOBHm_Chr4g0402201 RchiOBHm_Chr4g0430711 RchiOBHm_Chr4g0432871 RchiOBHm_Chr4g0437761 RchiOBHm_Chr5g0066251 RchiOBHm_Chr5g0078071 RchiOBHm_Chr6g0279961 RchiOBHm_Chr6g0289791 RchiOBHm_Chr7g0187741 RchiOBHm_Chr7g0208481
rosa_laevigata RLG00000002376 RLG00000011026 RLG00000011403 RLG00000012646 RLG00000014435 RLG00000014869 RLG00000015450 RLG00000015464 RLG00000016451 RLG00000017121 RLG00000018788 RLG00000018819 RLG00000021054 RLG00000028424 RLG00000030071 RLG00000031242 RLG00000031840 RLG00000031955 RLG00000033437 RLG00000033571 RLG00000034722 RLG00000035706 RLG00000035774 RLG00000036341 RLG00000036639
rosa_multiflora Rmu_co8023178.1_g000001 Rmu_co8119834.1_g000001 Rmu_co8158796.1_g000001 Rmu_co8339863.1_g000001 Rmu_co8512857.1_g000001 Rmu_sc0000174.1_g000006 Rmu_sc0000206.1_g000002 Rmu_sc0000266.1_g000002 Rmu_sc0000361.1_g000026 Rmu_sc0000493.1_g000035 Rmu_sc0000600.1_g000057 Rmu_sc0000796.1_g000012 Rmu_sc0000882.1_g000045 Rmu_sc0000913.1_g000014 Rmu_sc0000946.1_g000041 Rmu_sc0000966.1_g000013 Rmu_sc0001018.1_g000024 Rmu_sc0001018.1_g000025 Rmu_sc0001159.1_g000043 Rmu_sc0001287.1_g000024 Rmu_sc0001291.1_g000041 Rmu_sc0001380.1_g000028 Rmu_sc0001767.1_g000008 Rmu_sc0001802.1_g000010 Rmu_sc0001824.1_g000009 Rmu_sc0001850.1_g000024 Rmu_sc0002105.1_g000011 Rmu_sc0002129.1_g000032 Rmu_sc0002845.1_g000002 Rmu_sc0003054.1_g000001 Rmu_sc0003063.1_g000035 Rmu_sc0003131.1_g000034 Rmu_sc0003303.1_g000022 Rmu_sc0004347.1_g000013 Rmu_sc0004521.1_g000015 Rmu_sc0004618.1_g000056 Rmu_sc0004757.1_g000013 Rmu_sc0005056.1_g000003 Rmu_sc0005354.1_g000011 Rmu_sc0005385.1_g000018 Rmu_sc0005928.1_g000007 Rmu_sc0005933.1_g000003 Rmu_sc0006223.1_g000044 Rmu_sc0006314.1_g000007 Rmu_sc0006399.1_g000008 Rmu_sc0006847.1_g000001 Rmu_sc0007698.1_g000004 Rmu_sc0008509.1_g000023 Rmu_sc0008804.1_g000010 Rmu_sc0008818.1_g000001 Rmu_sc0009489.1_g000001 Rmu_sc0010407.1_g000001 Rmu_sc0010532.1_g000006 Rmu_sc0010988.1_g000001 Rmu_sc0012343.1_g000003 Rmu_sc0012922.1_g000001 Rmu_sc0013078.1_g000009 Rmu_sc0013419.1_g000005 Rmu_sc0013453.1_g000002 Rmu_sc0017867.1_g000004 Rmu_sc0023349.1_g000001 Rmu_sc0025859.1_g000001 Rmu_sc0028153.1_g000002 Rmu_sc0029528.1_g000001 Rmu_sc0030464.1_g000001 Rmu_sc0035933.1_g000001 Rmu_sc0038973.1_g000001 Rmu_sc0040007.1_g000003 Rmu_ssc0000053.1_g000007 Rmu_ssc0000128.1_g000001
rosa_roxburghii Rroxscaffold_175G00431900 Rroxscaffold_1G00018370 Rroxscaffold_1G00035430 Rroxscaffold_1G00040660 Rroxscaffold_1G00048390 Rroxscaffold_1G00048520 Rroxscaffold_2G00078960 Rroxscaffold_2G00086820 Rroxscaffold_2G00112940 Rroxscaffold_2G00118350 Rroxscaffold_2G00139200 Rroxscaffold_2G00141770 Rroxscaffold_3G00221980 Rroxscaffold_3G00227730 Rroxscaffold_3G00241010 Rroxscaffold_3G00242660 Rroxscaffold_4G00305460 Rroxscaffold_4G00324810 Rroxscaffold_4G00326090 Rroxscaffold_5G00334080 Rroxscaffold_5G00335320 Rroxscaffold_5G00344260 Rroxscaffold_5G00348290 Rroxscaffold_5G00381300 Rroxscaffold_6G00392050 Rroxscaffold_6G00401420 Rroxscaffold_6G00405930 Rroxscaffold_6G00418270 Rroxscaffold_6G00421490 Rroxscaffold_7G00167580 Rroxscaffold_7G00172500 Rroxscaffold_7G00173600 Rroxscaffold_7G00185890 Rroxscaffold_7G00192320 Rroxscaffold_7G00197110 Rroxscaffold_7G00209660 Rroxscaffold_7G00211150 Rroxscaffold_7G00216650
rosa_rugosa Rorug01G0040600 Rorug01G0063600 Rorug01G0071700 Rorug01G0184500 Rorug01G0302600 Rorug01G0322600 Rorug01G0403900 Rorug02G0026600 Rorug02G0026700 Rorug02G0074300 Rorug02G0074400 Rorug02G0074500.1 Rorug02G0326900 Rorug02G0351800 Rorug02G0378400 Rorug02G0473800 Rorug03G0023400 Rorug03G0073100 Rorug03G0074900 Rorug03G0118200 Rorug03G0129800 Rorug03G0150100 Rorug03G0178300 Rorug03G0192600 Rorug03G0201700 Rorug03G0231800 Rorug03G0271300 Rorug03G0360000.1 Rorug04G0026900 Rorug04G0036300 Rorug04G0081200 Rorug04G0129600 Rorug04G0153600 Rorug04G0169000 Rorug04G0211000 Rorug04G0211000 Rorug04G0440300 Rorug05G0008100 Rorug05G0083200 Rorug05G0137000 Rorug05G0251200 Rorug05G0411900 Rorug05G0422200 Rorug05G0472700 Rorug06G0026700 Rorug06G0062900 Rorug06G0063000 Rorug06G0069800 Rorug06G0081100 Rorug06G0093500 Rorug06G0095300 Rorug06G0241900 Rorug06G0480400 Rorug07G0043700 Rorug07G0113100 Rorug07G0211300.1 Rorug07G0267700 Rorug07G0281900 Rorug07G0307100
rosa_samantha Rh1AG057800 Rh1AG058600 Rh1AG167200 Rh1AG312300 Rh1AG364500 Rh1BG048900 Rh1BG120100 Rh1BG275500 Rh1BG351000 Rh1CG060500 Rh1CG060600 Rh1DG064500 Rh2AG116500 Rh2BG281500 Rh2BG454900 Rh2BG458000 Rh2BG661700 Rh2CG270000 Rh2DG031300 Rh2DG465000 Rh3DG087300 Rh4AG000500 Rh4AG015500 Rh4AG212800 Rh4BG073500 Rh4BG077400 Rh4BG096800 Rh4BG390300 Rh4CG238100 Rh4CG325900 Rh5AG150200 Rh5CG253600 Rh5DG148600 Rh6AG397200 Rh6BG405900 Rh7BG108000 Rh7BG438000 Rh7CG128200 Rh7CG286000 Rh7CG372000 Rh7CG454900
rosa_wichuraiana Rw1G016000 Rw2G002480 Rw3G029030 Rw4G012010 Rw4G019280 Rw4G020280 Rw4G026190 Rw7G009640 Rw7G020950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 177, 476
Acc36I ACCTGC 2 cut(s) 177, 476
AccB1I GGYRCC 1 cut(s) 1209
AciI CCGC 3 cut(s) 1167, 1183, 1323
AclWI GGATC 3 cut(s) 477, 753, 1418
AcsI RAATTY 1 cut(s) 1315
AcuI CTGAAG 1 cut(s) 405
AfaI GTAC 1 cut(s) 897
AflIII ACRYGT 1 cut(s) 823
AgeI ACCGGT 1 cut(s) 617
AgsI TTSAA 9 cut(s) 20, 71, 239, 340, 545, 849, 1009, 1015, 1043
AhlI ACTAGT 1 cut(s) 1073
AjnI CCWGG 1 cut(s) 1204
AluBI AGCT 5 cut(s) 394, 775, 909, 971, 1110
AluI AGCT 5 cut(s) 394, 775, 909, 971, 1110
Alw26I GTCTC 5 cut(s) 198, 462, 585, 654, 684
AlwI GGATC 3 cut(s) 477, 753, 1418
AlwNI CAGNNNCTG 1 cut(s) 256
Ama87I CYCGRG 1 cut(s) 565
AoxI GGCC 5 cut(s) 241, 958, 1020, 1185, 1236
ApeKI GCWGC 1 cut(s) 602
ApoI RAATTY 1 cut(s) 1315
AsiGI ACCGGT 1 cut(s) 617
Asp700I GAANNNNTTC 1 cut(s) 619
AspLEI GCGC 1 cut(s) 1223
AspS9I GGNCC 4 cut(s) 632, 958, 1020, 1185
AsuC2I CCSGG 2 cut(s) 957, 1214
AsuHPI GGTGA 3 cut(s) 158, 815, 1324
AsuNHI GCTAGC 1 cut(s) 1064
AvaI CYCGRG 1 cut(s) 565
AvaII GGWCC 1 cut(s) 632
BaeGI GKGCMC 1 cut(s) 1212
BanI GGYRCC 1 cut(s) 1209
BanII GRGCYC 1 cut(s) 13
BbsI GAAGAC 2 cut(s) 393, 1399
BbvI GCAGC 1 cut(s) 589
BccI CCATC 4 cut(s) 270, 603, 651, 791
BciT130I CCWGG 1 cut(s) 1206
BcnI CCSGG 2 cut(s) 957, 1214
BcoDI GTCTC 5 cut(s) 198, 462, 585, 654, 684
BcuI ACTAGT 1 cut(s) 1073
BfaI CTAG 5 cut(s) 134, 927, 1065, 1074, 1179
BfuAI ACCTGC 2 cut(s) 177, 476
BisI GCNGC 3 cut(s) 603, 1167, 1324
BlsI GCNGC 3 cut(s) 604, 1168, 1325
Bme1390I CCNGG 3 cut(s) 957, 1206, 1214
Bme18I GGWCC 1 cut(s) 632
BmeT110I CYCGRG 1 cut(s) 565
BmgT120I GGNCC 4 cut(s) 632, 958, 1020, 1185
BmiI GGNNCC 4 cut(s) 633, 634, 1021, 1211
BmrFI CCNGG 3 cut(s) 957, 1206, 1214
BmsI GCATC 2 cut(s) 262, 820
BmtI GCTAGC 1 cut(s) 1068
BpiI GAAGAC 2 cut(s) 393, 1399
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
BpmI CTGGAG 1 cut(s) 297
Bpu10I CCTNAGC 1 cut(s) 1133
BpuEI CTTGAG 1 cut(s) 1032
BpuMI CCSGG 2 cut(s) 957, 1214
BsaI GGTCTC 1 cut(s) 585
BsaJI CCNNGG 1 cut(s) 1205
BsaWI WCCGGW 2 cut(s) 617, 1197
BsaXI ACNNNNNCTCC 2 cut(s) 508, 538
Bse118I RCCGGY 1 cut(s) 617
Bse1I ACTGG 2 cut(s) 244, 286
Bse3DI GCAATG 2 cut(s) 887, 1087
BseBI CCWGG 1 cut(s) 1206
BseDI CCNNGG 1 cut(s) 1205
BseGI GGATG 2 cut(s) 835, 880
BseMI GCAATG 2 cut(s) 887, 1087
BseMII CTCAG 1 cut(s) 1147
BseNI ACTGG 2 cut(s) 244, 286
BseRI GAGGAG 1 cut(s) 1108
BseSI GKGCMC 1 cut(s) 1212
BseXI GCAGC 1 cut(s) 589
BshFI GGCC 5 cut(s) 243, 960, 1022, 1187, 1238
BshNI GGYRCC 1 cut(s) 1209
BshTI ACCGGT 1 cut(s) 617
BsiHKCI CYCGRG 1 cut(s) 565
BsiSI CCGG 5 cut(s) 618, 731, 956, 1198, 1213
BslFI GGGAC 2 cut(s) 618, 1066
BsmAI GTCTC 5 cut(s) 198, 462, 585, 654, 684
BsmFI GGGAC 2 cut(s) 618, 1066
BsmI GAATGC 1 cut(s) 986
BsnI GGCC 5 cut(s) 243, 960, 1022, 1187, 1238
Bso31I GGTCTC 1 cut(s) 585
BsoBI CYCGRG 1 cut(s) 565
Bsp1286I GDGCHC 2 cut(s) 13, 1212
Bsp143I GATC 5 cut(s) 482, 573, 745, 1171, 1423
BspACI CCGC 3 cut(s) 1167, 1183, 1323
BspANI GGCC 5 cut(s) 243, 960, 1022, 1187, 1238
BspCNI CTCAG 1 cut(s) 1146
BspLI GGNNCC 4 cut(s) 633, 634, 1021, 1211
BspMI ACCTGC 2 cut(s) 177, 476
BspOI GCTAGC 1 cut(s) 1068
BspPI GGATC 3 cut(s) 477, 753, 1418
BspT107I GGYRCC 1 cut(s) 1209
BspTNI GGTCTC 1 cut(s) 585
BsrDI GCAATG 2 cut(s) 887, 1087
BsrFI RCCGGY 1 cut(s) 617
BsrI ACTGG 2 cut(s) 244, 286
BssAI RCCGGY 1 cut(s) 617
BssECI CCNNGG 1 cut(s) 1205
BssMI GATC 5 cut(s) 482, 573, 745, 1171, 1423
Bst2UI CCWGG 1 cut(s) 1206
Bst4CI ACNGT 5 cut(s) 232, 258, 1247, 1331, 1432
Bst6I CTCTTC 1 cut(s) 994
BstC8I GCNNGC 5 cut(s) 34, 969, 1066, 1185, 1219
BstDEI CTNAG 2 cut(s) 395, 1133
BstF5I GGATG 2 cut(s) 835, 880
BstHHI GCGC 1 cut(s) 1223
BstKTI GATC 5 cut(s) 485, 576, 748, 1174, 1426
BstMAI GTCTC 5 cut(s) 198, 462, 585, 654, 684
BstMBI GATC 5 cut(s) 482, 573, 745, 1171, 1423
BstMWI GCNNNNNNNGC 2 cut(s) 772, 943
BstNI CCWGG 1 cut(s) 1206
BstNSI RCATGY 1 cut(s) 827
BstSCI CCNGG 3 cut(s) 955, 1204, 1212
BstSLI GKGCMC 1 cut(s) 1212
BstV1I GCAGC 1 cut(s) 589
BstV2I GAAGAC 2 cut(s) 393, 1399
BstX2I RGATCY 2 cut(s) 482, 1423
BstXI CCANNNNNNTGG 1 cut(s) 275
BstYI RGATCY 2 cut(s) 482, 1423
BsuRI GGCC 5 cut(s) 243, 960, 1022, 1187, 1238
BtsCI GGATG 2 cut(s) 835, 880
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 2 cut(s) 747, 1428
BveI ACCTGC 2 cut(s) 177, 476
Cac8I GCNNGC 5 cut(s) 34, 969, 1066, 1185, 1219
CaiI CAGNNNCTG 1 cut(s) 256
CfoI GCGC 1 cut(s) 1223
Cfr10I RCCGGY 1 cut(s) 617
Cfr13I GGNCC 4 cut(s) 632, 958, 1020, 1185
Csp6I GTAC 1 cut(s) 896
CspAI ACCGGT 1 cut(s) 617
CspCI CAANNNNNGTGG 2 cut(s) 1228, 1263
CviAII CATG 4 cut(s) 269, 419, 664, 824
CviQI GTAC 1 cut(s) 896
DdeI CTNAG 2 cut(s) 395, 1133
DpnI GATC 5 cut(s) 484, 575, 747, 1173, 1425
DpnII GATC 5 cut(s) 482, 573, 745, 1171, 1423
Eam1104I CTCTTC 1 cut(s) 994
EarI CTCTTC 1 cut(s) 994
Eco24I GRGCYC 1 cut(s) 13
Eco31I GGTCTC 1 cut(s) 585
Eco47I GGWCC 1 cut(s) 632
Eco57I CTGAAG 1 cut(s) 405
Eco88I CYCGRG 1 cut(s) 565
EcoO109I RGGNCCY 1 cut(s) 632
EcoRII CCWGG 1 cut(s) 1204
EcoT22I ATGCAT 1 cut(s) 424
EcoT38I GRGCYC 1 cut(s) 13
FaeI CATG 4 cut(s) 272, 422, 667, 827
FalI AAGNNNNNCTT 8 cut(s) 378, 410, 502, 534, 759, 791, 931, 963
FaqI GGGAC 2 cut(s) 618, 1066
FatI CATG 4 cut(s) 268, 418, 663, 823
FauI CCCGC 1 cut(s) 1176
FauNDI CATATG 1 cut(s) 429
Fnu4HI GCNGC 3 cut(s) 603, 1167, 1324
FokI GGATG 2 cut(s) 842, 887
FriOI GRGCYC 1 cut(s) 13
Fsp4HI GCNGC 3 cut(s) 603, 1167, 1324
FspBI CTAG 5 cut(s) 134, 927, 1065, 1074, 1179
GlaI GCGC 1 cut(s) 1222
GluI GCNGC 3 cut(s) 603, 1167, 1324
GsuI CTGGAG 1 cut(s) 297
HaeIII GGCC 5 cut(s) 243, 960, 1022, 1187, 1238
HapII CCGG 5 cut(s) 618, 731, 956, 1198, 1213
HhaI GCGC 1 cut(s) 1223
Hin1II CATG 4 cut(s) 272, 422, 667, 827
Hin6I GCGC 1 cut(s) 1221
HinP1I GCGC 1 cut(s) 1221
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 2 cut(s) 392, 773
HinfI GANTC 8 cut(s) 71, 180, 545, 721, 727, 992, 1337, 1372
HpaII CCGG 5 cut(s) 618, 731, 956, 1198, 1213
HphI GGTGA 3 cut(s) 158, 815, 1324
Hpy166II GTNNAC 1 cut(s) 283
Hpy188I TCNGA 4 cut(s) 76, 726, 979, 1273
Hpy188III TCNNGA 7 cut(s) 68, 497, 542, 549, 567, 749, 996
Hpy8I GTNNAC 1 cut(s) 283
Hpy99I CGWCG 1 cut(s) 916
HpyAV CCTTC 8 cut(s) 173, 301, 314, 710, 800, 831, 1281, 1362
HpyCH4III ACNGT 5 cut(s) 232, 258, 1247, 1331, 1432
HpyCH4V TGCA 7 cut(s) 422, 655, 740, 766, 833, 892, 1364
HpyF10VI GCNNNNNNNGC 2 cut(s) 772, 943
HpyF3I CTNAG 2 cut(s) 395, 1133
Hsp92II CATG 4 cut(s) 272, 422, 667, 827
HspAI GCGC 1 cut(s) 1221
KflI GGGWCCC 1 cut(s) 632
Kzo9I GATC 5 cut(s) 482, 573, 745, 1171, 1423
LmnI GCTCC 3 cut(s) 49, 93, 1095
Lsp1109I GCAGC 1 cut(s) 589
LweI GCATC 2 cut(s) 262, 820
MaeI CTAG 5 cut(s) 134, 927, 1065, 1074, 1179
MaeIII GTNAC 3 cut(s) 226, 246, 703
MalI GATC 5 cut(s) 484, 575, 747, 1173, 1425
MboI GATC 5 cut(s) 482, 573, 745, 1171, 1423
MboII GAAGA 6 cut(s) 227, 398, 876, 1011, 1153, 1404
MfeI CAATTG 1 cut(s) 1029
MflI RGATCY 2 cut(s) 482, 1423
MhlI GDGCHC 2 cut(s) 13, 1212
MluCI AATT 7 cut(s) 57, 316, 637, 668, 699, 1029, 1315
MlyI GAGTC 2 cut(s) 1001, 1366
MnlI CCTC 9 cut(s) 63, 204, 745, 1086, 1095, 1254, 1295, 1303, 1366
Mph1103I ATGCAT 1 cut(s) 424
MroXI GAANNNNTTC 1 cut(s) 619
MseI TTAA 2 cut(s) 188, 315
MslI CAYNNNNRTG 2 cut(s) 267, 828
MspA1I CMGCKG 2 cut(s) 1169, 1323
MspI CCGG 5 cut(s) 618, 731, 956, 1198, 1213
MspR9I CCNGG 3 cut(s) 957, 1206, 1214
MunI CAATTG 1 cut(s) 1029
Mva1269I GAATGC 1 cut(s) 986
MvaI CCWGG 1 cut(s) 1206
MwoI GCNNNNNNNGC 2 cut(s) 772, 943
NciI CCSGG 2 cut(s) 957, 1214
NdeI CATATG 1 cut(s) 429
NdeII GATC 5 cut(s) 482, 573, 745, 1171, 1423
NheI GCTAGC 1 cut(s) 1064
NlaIII CATG 4 cut(s) 272, 422, 667, 827
NlaIV GGNNCC 4 cut(s) 633, 634, 1021, 1211
NmuCI GTSAC 2 cut(s) 226, 703
NsiI ATGCAT 1 cut(s) 424
NspI RCATGY 1 cut(s) 827
PaeR7I CTCGAG 1 cut(s) 565
PaqCI CACCTGC 2 cut(s) 177, 476
PciI ACATGT 1 cut(s) 823
PctI GAATGC 1 cut(s) 986
PdmI GAANNNNTTC 1 cut(s) 619
PfeI GAWTC 6 cut(s) 71, 180, 545, 721, 727, 1337
PinAI ACCGGT 1 cut(s) 617
PkrI GCNGC 3 cut(s) 604, 1168, 1325
PleI GAGTC 2 cut(s) 1000, 1366
PpsI GAGTC 2 cut(s) 1000, 1366
PpuMI RGGWCCY 1 cut(s) 632
PscI ACATGT 1 cut(s) 823
Psp5II RGGWCCY 1 cut(s) 632
Psp6I CCWGG 1 cut(s) 1204
PspGI CCWGG 1 cut(s) 1204
PspN4I GGNNCC 4 cut(s) 633, 634, 1021, 1211
PspPI GGNCC 4 cut(s) 632, 958, 1020, 1185
PspPPI RGGWCCY 1 cut(s) 632
PstNI CAGNNNCTG 1 cut(s) 256
PsuI RGATCY 2 cut(s) 482, 1423
RsaI GTAC 1 cut(s) 897
RsaNI GTAC 1 cut(s) 896
RseI CAYNNNNRTG 2 cut(s) 267, 828
SaqAI TTAA 2 cut(s) 188, 315
SatI GCNGC 3 cut(s) 603, 1167, 1324
Sau3AI GATC 5 cut(s) 482, 573, 745, 1171, 1423
Sau96I GGNCC 4 cut(s) 632, 958, 1020, 1185
SchI GAGTC 2 cut(s) 1001, 1366
ScrFI CCNGG 3 cut(s) 957, 1206, 1214
SduI GDGCHC 2 cut(s) 13, 1212
SfaNI GCATC 2 cut(s) 262, 820
Sfr274I CTCGAG 1 cut(s) 565
SinI GGWCC 1 cut(s) 632
SlaI CTCGAG 1 cut(s) 565
SmiMI CAYNNNNRTG 2 cut(s) 267, 828
SmlI CTYRAG 2 cut(s) 565, 1047
SmoI CTYRAG 2 cut(s) 565, 1047
SpeI ACTAGT 1 cut(s) 1073
Sse9I AATT 7 cut(s) 57, 316, 637, 668, 699, 1029, 1315
SsiI CCGC 3 cut(s) 1167, 1183, 1323
SspMI CTAG 5 cut(s) 134, 927, 1065, 1074, 1179
StyD4I CCNGG 3 cut(s) 955, 1204, 1212
TaaI ACNGT 5 cut(s) 232, 258, 1247, 1331, 1432
TaqI TCGA 3 cut(s) 558, 566, 911
TasI AATT 7 cut(s) 57, 316, 637, 668, 699, 1029, 1315
TauI GCSGC 2 cut(s) 1169, 1326
TfiI GAWTC 6 cut(s) 71, 180, 545, 721, 727, 1337
Tru1I TTAA 2 cut(s) 188, 315
Tru9I TTAA 2 cut(s) 188, 315
TscAI CASTG 2 cut(s) 747, 1435
TseFI GTSAC 2 cut(s) 226, 703
TseI GCWGC 1 cut(s) 602
Tsp45I GTSAC 2 cut(s) 226, 703
TspDTI ATGAA 7 cut(s) 283, 416, 729, 876, 1242, 1400, 1404
TspGWI ACGGA 1 cut(s) 672
TspRI CASTG 2 cut(s) 747, 1435
VpaK11BI GGWCC 1 cut(s) 632
XapI RAATTY 1 cut(s) 1315
XceI RCATGY 1 cut(s) 827
XcmI CCANNNNNNNNNTGG 1 cut(s) 643
XhoI CTCGAG 1 cut(s) 565
XmnI GAANNNNTTC 1 cut(s) 619
XspI CTAG 5 cut(s) 134, 927, 1065, 1074, 1179
Zsp2I ATGCAT 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.