ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 38 |
| AciI | CCGC | 4 cut(s) | 34, 297, 360, 389 |
| AcuI | CTGAAG | 1 cut(s) | 78 |
| AgsI | TTSAA | 3 cut(s) | 110, 386, 413 |
| AluBI | AGCT | 3 cut(s) | 62, 68, 401 |
| AluI | AGCT | 3 cut(s) | 62, 68, 401 |
| AseI | ATTAAT | 1 cut(s) | 147 |
| AspLEI | GCGC | 1 cut(s) | 348 |
| AspS9I | GGNCC | 1 cut(s) | 172 |
| AsuHPI | GGTGA | 1 cut(s) | 233 |
| AvaII | GGWCC | 1 cut(s) | 172 |
| BaeGI | GKGCMC | 1 cut(s) | 43 |
| BanI | GGYRCC | 1 cut(s) | 38 |
| BccI | CCATC | 1 cut(s) | 194 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BglII | AGATCT | 1 cut(s) | 350 |
| BisI | GCNGC | 1 cut(s) | 361 |
| BlsI | GCNGC | 1 cut(s) | 362 |
| Bme18I | GGWCC | 1 cut(s) | 172 |
| BmgT120I | GGNCC | 1 cut(s) | 172 |
| BmiI | GGNNCC | 1 cut(s) | 40 |
| BmsI | GCATC | 2 cut(s) | 121, 295 |
| BsaWI | WCCGGW | 1 cut(s) | 251 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BseSI | GKGCMC | 1 cut(s) | 43 |
| BshNI | GGYRCC | 1 cut(s) | 38 |
| BsiSI | CCGG | 1 cut(s) | 252 |
| BsmI | GAATGC | 1 cut(s) | 247 |
| Bsp1286I | GDGCHC | 1 cut(s) | 43 |
| Bsp143I | GATC | 2 cut(s) | 138, 350 |
| BspACI | CCGC | 4 cut(s) | 34, 297, 360, 389 |
| BspLI | GGNNCC | 1 cut(s) | 40 |
| BspQI | GCTCTTC | 1 cut(s) | 313 |
| BspT107I | GGYRCC | 1 cut(s) | 38 |
| BssMI | GATC | 2 cut(s) | 138, 350 |
| Bst6I | CTCTTC | 2 cut(s) | 313, 408 |
| BstC8I | GCNNGC | 1 cut(s) | 295 |
| BstDEI | CTNAG | 3 cut(s) | 46, 116, 176 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstHHI | GCGC | 1 cut(s) | 348 |
| BstKTI | GATC | 2 cut(s) | 141, 353 |
| BstMBI | GATC | 2 cut(s) | 138, 350 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 31, 303, 312 |
| BstSLI | GKGCMC | 1 cut(s) | 43 |
| BstX2I | RGATCY | 1 cut(s) | 350 |
| BstYI | RGATCY | 1 cut(s) | 350 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| Cac8I | GCNNGC | 1 cut(s) | 295 |
| CfoI | GCGC | 1 cut(s) | 348 |
| Cfr13I | GGNCC | 1 cut(s) | 172 |
| CviAII | CATG | 1 cut(s) | 232 |
| CviJI | RGCY | 9 cut(s) | 62, 68, 82, 121, 293, 306, 363, 374, 401 |
| CviKI_1 | RGCY | 9 cut(s) | 62, 68, 82, 121, 293, 306, 363, 374, 401 |
| DdeI | CTNAG | 3 cut(s) | 46, 116, 176 |
| DpnI | GATC | 2 cut(s) | 140, 352 |
| DpnII | GATC | 2 cut(s) | 138, 350 |
| Eam1104I | CTCTTC | 2 cut(s) | 313, 408 |
| EarI | CTCTTC | 2 cut(s) | 313, 408 |
| Eco47I | GGWCC | 1 cut(s) | 172 |
| Eco57I | CTGAAG | 1 cut(s) | 78 |
| EcoT22I | ATGCAT | 2 cut(s) | 136, 154 |
| FaeI | CATG | 1 cut(s) | 235 |
| FaiI | YATR | 4 cut(s) | 73, 213, 233, 317 |
| FatI | CATG | 1 cut(s) | 231 |
| FauI | CCCGC | 3 cut(s) | 27, 290, 382 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| Fnu4HI | GCNGC | 1 cut(s) | 361 |
| FokI | GGATG | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 1 cut(s) | 361 |
| FspBI | CTAG | 1 cut(s) | 122 |
| GlaI | GCGC | 1 cut(s) | 347 |
| GluI | GCNGC | 1 cut(s) | 361 |
| HapII | CCGG | 1 cut(s) | 252 |
| HhaI | GCGC | 1 cut(s) | 348 |
| Hin1II | CATG | 1 cut(s) | 235 |
| Hin6I | GCGC | 1 cut(s) | 346 |
| HinP1I | GCGC | 1 cut(s) | 346 |
| HindIII | AAGCTT | 1 cut(s) | 60 |
| HinfI | GANTC | 1 cut(s) | 340 |
| HpaII | CCGG | 1 cut(s) | 252 |
| HphI | GGTGA | 1 cut(s) | 233 |
| Hpy188I | TCNGA | 3 cut(s) | 335, 379, 406 |
| HpyCH4V | TGCA | 3 cut(s) | 134, 152, 315 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 31, 303, 312 |
| HpyF3I | CTNAG | 3 cut(s) | 46, 116, 176 |
| Hsp92II | CATG | 1 cut(s) | 235 |
| HspAI | GCGC | 1 cut(s) | 346 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| Kzo9I | GATC | 2 cut(s) | 138, 350 |
| LguI | GCTCTTC | 1 cut(s) | 313 |
| LpnPI | CCDG | 9 cut(s) | 44, 65, 69, 265, 275, 325, 349, 356, 411 |
| LweI | GCATC | 2 cut(s) | 121, 295 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MalI | GATC | 2 cut(s) | 140, 352 |
| MboI | GATC | 2 cut(s) | 138, 350 |
| MboII | GAAGA | 2 cut(s) | 300, 425 |
| MfeI | CAATTG | 1 cut(s) | 98 |
| MflI | RGATCY | 1 cut(s) | 350 |
| MhlI | GDGCHC | 1 cut(s) | 43 |
| MluCI | AATT | 2 cut(s) | 85, 98 |
| MmeI | TCCRAC | 1 cut(s) | 402 |
| MnlI | CCTC | 2 cut(s) | 296, 409 |
| Mph1103I | ATGCAT | 2 cut(s) | 136, 154 |
| MseI | TTAA | 2 cut(s) | 84, 147 |
| MspA1I | CMGCKG | 1 cut(s) | 34 |
| MspI | CCGG | 1 cut(s) | 252 |
| MunI | CAATTG | 1 cut(s) | 98 |
| Mva1269I | GAATGC | 1 cut(s) | 247 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 31, 303, 312 |
| NdeII | GATC | 2 cut(s) | 138, 350 |
| NlaIII | CATG | 1 cut(s) | 235 |
| NlaIV | GGNNCC | 1 cut(s) | 40 |
| NsiI | ATGCAT | 2 cut(s) | 136, 154 |
| PciSI | GCTCTTC | 1 cut(s) | 313 |
| PctI | GAATGC | 1 cut(s) | 247 |
| PfeI | GAWTC | 1 cut(s) | 340 |
| PkrI | GCNGC | 1 cut(s) | 362 |
| PshBI | ATTAAT | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 1 cut(s) | 40 |
| PspPI | GGNCC | 1 cut(s) | 172 |
| PsuI | RGATCY | 1 cut(s) | 350 |
| SapI | GCTCTTC | 1 cut(s) | 313 |
| SaqAI | TTAA | 2 cut(s) | 84, 147 |
| SatI | GCNGC | 1 cut(s) | 361 |
| Sau3AI | GATC | 2 cut(s) | 138, 350 |
| Sau96I | GGNCC | 1 cut(s) | 172 |
| SduI | GDGCHC | 1 cut(s) | 43 |
| SetI | ASST | 4 cut(s) | 64, 70, 177, 403 |
| SfaNI | GCATC | 2 cut(s) | 121, 295 |
| SinI | GGWCC | 1 cut(s) | 172 |
| Sse9I | AATT | 2 cut(s) | 85, 98 |
| SsiI | CCGC | 4 cut(s) | 34, 297, 360, 389 |
| SspMI | CTAG | 1 cut(s) | 122 |
| TasI | AATT | 2 cut(s) | 85, 98 |
| TauI | GCSGC | 1 cut(s) | 363 |
| TfiI | GAWTC | 1 cut(s) | 340 |
| Tru1I | TTAA | 2 cut(s) | 84, 147 |
| Tru9I | TTAA | 2 cut(s) | 84, 147 |
| VpaK11BI | GGWCC | 1 cut(s) | 172 |
| VspI | ATTAAT | 1 cut(s) | 147 |
| XspI | CTAG | 1 cut(s) | 122 |
| Zsp2I | ATGCAT | 2 cut(s) | 136, 154 |