Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 370 |
| AciI | CCGC | 1 cut(s) | 80 |
| AcuI | CTGAAG | 1 cut(s) | 18 |
| AfaI | GTAC | 1 cut(s) | 426 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 161 |
| AgsI | TTSAA | 3 cut(s) | 172, 314, 338 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 205 |
| AjnI | CCWGG | 1 cut(s) | 324 |
| AluBI | AGCT | 2 cut(s) | 72, 175 |
| AluI | AGCT | 2 cut(s) | 72, 175 |
| Aor13HI | TCCGGA | 1 cut(s) | 370 |
| AoxI | GGCC | 1 cut(s) | 299 |
| AseI | ATTAAT | 1 cut(s) | 260 |
| AspS9I | GGNCC | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 2 cut(s) | 254, 355 |
| AvaII | GGWCC | 1 cut(s) | 147 |
| BccI | CCATC | 3 cut(s) | 163, 239, 288 |
| BciT130I | CCWGG | 1 cut(s) | 326 |
| BfaI | CTAG | 4 cut(s) | 24, 69, 161, 272 |
| Bme1390I | CCNGG | 1 cut(s) | 326 |
| Bme18I | GGWCC | 1 cut(s) | 147 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 1 cut(s) | 147 |
| BmiI | GGNNCC | 2 cut(s) | 149, 369 |
| BmrFI | CCNGG | 1 cut(s) | 326 |
| BmsI | GCATC | 2 cut(s) | 175, 197 |
| BpuEI | CTTGAG | 2 cut(s) | 152, 413 |
| BsaWI | WCCGGW | 1 cut(s) | 370 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 365, 369, 395, 399 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 161 |
| Bse3DI | GCAATG | 1 cut(s) | 285 |
| BseAI | TCCGGA | 1 cut(s) | 370 |
| BseBI | CCWGG | 1 cut(s) | 326 |
| BseGI | GGATG | 1 cut(s) | 299 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 161 |
| BseMI | GCAATG | 1 cut(s) | 285 |
| BseRI | GAGGAG | 1 cut(s) | 252 |
| BshFI | GGCC | 1 cut(s) | 301 |
| BsiSI | CCGG | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 161 |
| BsmI | GAATGC | 1 cut(s) | 142 |
| BsnI | GGCC | 1 cut(s) | 301 |
| Bsp13I | TCCGGA | 1 cut(s) | 370 |
| Bsp143I | GATC | 1 cut(s) | 127 |
| BspACI | CCGC | 1 cut(s) | 80 |
| BspANI | GGCC | 1 cut(s) | 301 |
| BspEI | TCCGGA | 1 cut(s) | 370 |
| BspLI | GGNNCC | 2 cut(s) | 149, 369 |
| BsrDI | GCAATG | 1 cut(s) | 285 |
| BssMI | GATC | 1 cut(s) | 127 |
| Bst2UI | CCWGG | 1 cut(s) | 326 |
| BstC8I | GCNNGC | 2 cut(s) | 74, 78 |
| BstF5I | GGATG | 1 cut(s) | 299 |
| BstKTI | GATC | 1 cut(s) | 130 |
| BstMBI | GATC | 1 cut(s) | 127 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 82 |
| BstNI | CCWGG | 1 cut(s) | 326 |
| BstSCI | CCNGG | 1 cut(s) | 324 |
| BsuRI | GGCC | 1 cut(s) | 301 |
| BtsCI | GGATG | 1 cut(s) | 299 |
| Cac8I | GCNNGC | 2 cut(s) | 74, 78 |
| Cfr13I | GGNCC | 1 cut(s) | 147 |
| CseI | GACGC | 1 cut(s) | 338 |
| Csp6I | GTAC | 1 cut(s) | 425 |
| CviAII | CATG | 2 cut(s) | 11, 411 |
| CviJI | RGCY | 5 cut(s) | 72, 175, 301, 368, 415 |
| CviKI_1 | RGCY | 5 cut(s) | 72, 175, 301, 368, 415 |
| CviQI | GTAC | 1 cut(s) | 425 |
| DpnI | GATC | 1 cut(s) | 129 |
| DpnII | GATC | 1 cut(s) | 127 |
| DriI | GACNNNNNGTC | 1 cut(s) | 205 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 205 |
| Eco47I | GGWCC | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 1 cut(s) | 18 |
| EcoRII | CCWGG | 1 cut(s) | 324 |
| EcoT22I | ATGCAT | 1 cut(s) | 190 |
| FaeI | CATG | 2 cut(s) | 14, 414 |
| FaiI | YATR | 3 cut(s) | 12, 45, 412 |
| FatI | CATG | 2 cut(s) | 10, 410 |
| FokI | GGATG | 1 cut(s) | 306 |
| FspBI | CTAG | 4 cut(s) | 24, 69, 161, 272 |
| HaeIII | GGCC | 1 cut(s) | 301 |
| HapII | CCGG | 1 cut(s) | 371 |
| HgaI | GACGC | 1 cut(s) | 338 |
| Hin1II | CATG | 2 cut(s) | 14, 414 |
| HincII | GTYRAC | 2 cut(s) | 20, 388 |
| HindII | GTYRAC | 2 cut(s) | 20, 388 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HpaII | CCGG | 1 cut(s) | 371 |
| HphI | GGTGA | 2 cut(s) | 254, 355 |
| Hpy166II | GTNNAC | 3 cut(s) | 20, 147, 388 |
| Hpy188III | TCNNGA | 4 cut(s) | 131, 272, 371, 449 |
| Hpy8I | GTNNAC | 3 cut(s) | 20, 147, 388 |
| HpyAV | CCTTC | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 3 cut(s) | 10, 85, 188 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 82 |
| Hsp92II | CATG | 2 cut(s) | 14, 414 |
| Kpn2I | TCCGGA | 1 cut(s) | 370 |
| Kzo9I | GATC | 1 cut(s) | 127 |
| LmnI | GCTCC | 1 cut(s) | 373 |
| LpnPI | CCDG | 6 cut(s) | 311, 315, 338, 382, 384, 427 |
| LweI | GCATC | 2 cut(s) | 175, 197 |
| MaeI | CTAG | 4 cut(s) | 24, 69, 161, 272 |
| MaeIII | GTNAC | 1 cut(s) | 207 |
| MalI | GATC | 1 cut(s) | 129 |
| MboI | GATC | 1 cut(s) | 127 |
| MboII | GAAGA | 1 cut(s) | 24 |
| MfeI | CAATTG | 1 cut(s) | 338 |
| MluCI | AATT | 3 cut(s) | 178, 231, 338 |
| MmeI | TCCRAC | 1 cut(s) | 264 |
| MnlI | CCTC | 7 cut(s) | 88, 102, 230, 233, 268, 291, 367 |
| Mph1103I | ATGCAT | 1 cut(s) | 190 |
| MroI | TCCGGA | 1 cut(s) | 370 |
| MseI | TTAA | 3 cut(s) | 177, 230, 260 |
| MspI | CCGG | 1 cut(s) | 371 |
| MspR9I | CCNGG | 1 cut(s) | 326 |
| MunI | CAATTG | 1 cut(s) | 338 |
| Mva1269I | GAATGC | 1 cut(s) | 142 |
| MvaI | CCWGG | 1 cut(s) | 326 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 82 |
| NdeII | GATC | 1 cut(s) | 127 |
| NlaIII | CATG | 2 cut(s) | 14, 414 |
| NlaIV | GGNNCC | 2 cut(s) | 149, 369 |
| NmuCI | GTSAC | 1 cut(s) | 207 |
| NsiI | ATGCAT | 1 cut(s) | 190 |
| PctI | GAATGC | 1 cut(s) | 142 |
| PflFI | GACNNNGTC | 1 cut(s) | 392 |
| PshBI | ATTAAT | 1 cut(s) | 260 |
| Psp6I | CCWGG | 1 cut(s) | 324 |
| PspGI | CCWGG | 1 cut(s) | 324 |
| PspN4I | GGNNCC | 2 cut(s) | 149, 369 |
| PspPI | GGNCC | 1 cut(s) | 147 |
| PsyI | GACNNNGTC | 1 cut(s) | 392 |
| RsaI | GTAC | 1 cut(s) | 426 |
| RsaNI | GTAC | 1 cut(s) | 425 |
| SaqAI | TTAA | 3 cut(s) | 177, 230, 260 |
| Sau3AI | GATC | 1 cut(s) | 127 |
| Sau96I | GGNCC | 1 cut(s) | 147 |
| ScrFI | CCNGG | 1 cut(s) | 326 |
| SetI | ASST | 9 cut(s) | 25, 31, 74, 177, 244, 312, 396, 435, 446 |
| SfaNI | GCATC | 2 cut(s) | 175, 197 |
| SinI | GGWCC | 1 cut(s) | 147 |
| SmlI | CTYRAG | 2 cut(s) | 131, 428 |
| SmoI | CTYRAG | 2 cut(s) | 131, 428 |
| Sse9I | AATT | 3 cut(s) | 178, 231, 338 |
| SsiI | CCGC | 1 cut(s) | 80 |
| SspMI | CTAG | 4 cut(s) | 24, 69, 161, 272 |
| StyD4I | CCNGG | 1 cut(s) | 324 |
| TasI | AATT | 3 cut(s) | 178, 231, 338 |
| Tru1I | TTAA | 3 cut(s) | 177, 230, 260 |
| Tru9I | TTAA | 3 cut(s) | 177, 230, 260 |
| TseFI | GTSAC | 1 cut(s) | 207 |
| Tsp45I | GTSAC | 1 cut(s) | 207 |
| Tth111I | GACNNNGTC | 1 cut(s) | 392 |
| VpaK11BI | GGWCC | 1 cut(s) | 147 |
| VspI | ATTAAT | 1 cut(s) | 260 |
| XbaI | TCTAGA | 1 cut(s) | 271 |
| XspI | CTAG | 4 cut(s) | 24, 69, 161, 272 |
| Zsp2I | ATGCAT | 1 cut(s) | 190 |